Gvermi6415.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6415.t1
Unique NameGvermi6415.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length129
Homology
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A5M8QHY3_9BACT (Uncharacterized protein n=1 Tax=Rufibacter glacialis TaxID=1259555 RepID=A0A5M8QHY3_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 1.110e-15
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 0
Query:    6 KNALAFIVGLIMSVVAISAIQSLGHSVYPM-SKLNPTQSIGL-----------LLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTCTYLPAAYYGAKLVGEN 123
            ++ L+ + G  + V  IS +Q + H +YP+ + LNP Q   +           LL V   +  GS L G   A+ A T ++   +  G+LL V G+ NL+A+PHPLWFAV+S   YLP AY+G  +    
Sbjct:    3 RSILSVVGGAAIGVFTISLVQYMSHQLYPVPAHLNPNQGQAVASALENAPTAALLLVLFGFALGSFLAGMVAARYAHTRKVLHALLAGLLLMVAGIANLLALPHPLWFAVVSLLLYLPMAYFGGNMAARR 132          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A348Y1V4_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A348Y1V4_9FLAO)

HSP 1 Score: 76.3 bits (186), Expect = 3.450e-15
Identity = 51/132 (38.64%), Postives = 73/132 (55.30%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIMSVVAISAIQSLGHSVYPMSK---LNPTQSIG--LLLFVEASYLF-------GSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLST-CTYLPAAYYGAKL 119
            MHP+I+N LAFI GLI++ +    +  LG+++ P  +   ++ T+ +   + L    +YLF       GS  GGF  AK AAT +M L M  G+L   FG+  +  +P P WF+VL     YLP  Y GAKL
Sbjct:    1 MHPIIRNILAFIAGLILANIVNMCLIILGNNLIPAPEGADISSTEGLQETMHLLQPQNYLFPFLAHALGSFTGGFIIAKFAATNKMTLAMAFGILYLCFGLYMIAVVPAPTWFSVLDGFLAYLPMTYIGAKL 132          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A0A2MEJ9_9FLAO (Signal peptide protein n=1 Tax=Flavobacterium suncheonense GH29-5 = DSM 17707 TaxID=1121899 RepID=A0A0A2MEJ9_9FLAO)

HSP 1 Score: 75.5 bits (184), Expect = 7.570e-15
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIMSVVAISAIQSLGHSVYPMSKLNPTQSIGLL-----LFVEASYLF-------GSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTCT-YLPAAYYGAKL 119
            M+P+++N LA I G+I+  V   A+ SLGH++ P+ +     +I  +     LF    ++F       G++ G F  AKLAAT +M + +G+GV   + G+     MP P+WF  L     Y+P AY G KL
Sbjct:    1 MNPIVRNILAVITGIIVGSVVNMALISLGHAIIPLPEGADVSTIEKMKESVHLFGSEQFIFPFIAHALGTLAGAFAAAKLAATSKMRIALGIGVYFLIAGIYMCFLMPAPVWFMALDVLVAYIPMAYLGGKL 132          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A839GH09_9BACT (Uncharacterized protein n=1 Tax=Rufibacter quisquiliarum TaxID=1549639 RepID=A0A839GH09_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 2.480e-14
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 0
Query:    6 KNALAFIVGLIMSVVAISAIQSLGHSVYPMS---KLNPTQSIG---------LLLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTCTYLPAAYYGAKL 119
            K+ LA + G  + V  I  +Q LGH  YP      L+ TQ++G          LL V  +Y  GS  GG   A+ A    +   + +G+LL + G+ NL+ +PHPLWF+++S   YLP A++G  +
Sbjct:    3 KSILAVLGGAAVGVFTIGLVQYLGHQWYPTPGNLSLDDTQAVGSYLATAPTGALLLVLLAYALGSWFGGMVGARYAPAKPVVHALAVGLLLMLSGIANLLVIPHPLWFSIVSLLVYLPMAFFGGMM 128          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A850KZQ3_9GAMM (Uncharacterized protein n=1 Tax=Kangiellaceae bacterium TaxID=2026751 RepID=A0A850KZQ3_9GAMM)

HSP 1 Score: 72.4 bits (176), Expect = 9.390e-14
Identity = 43/126 (34.13%), Postives = 72/126 (57.14%), Query Frame = 0
Query:    6 KNALAFIVGLIMSVVAISAIQSLGHSVYPMSK---LNPTQS---------IGLLLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTCTYLPAAYYGAKL 119
            K  LA I G+++ V+ I AI+S+    +P  +   +  T++         I  LL V  +Y  GS + GF +AK+A +  M + +  G LLTV G+ N++A+PHP+WF ++S   ++P A +G K+
Sbjct:    3 KQILAVIAGVVVGVLTIFAIESINMVRFPWPEGLSMEDTEAFNAYVASLPIDALLTVILAYALGSFVAGFVSAKVATSKHMVIGIICGALLTVAGIMNIMAIPHPMWFNIVSLIVFIPMAIFGVKM 128          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A7H8PS50_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina sp. TRL1 TaxID=2736252 RepID=A0A7H8PS50_9FLAO)

HSP 1 Score: 71.2 bits (173), Expect = 3.180e-13
Identity = 38/135 (28.15%), Postives = 71/135 (52.59%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIMSVVAISAIQSLGHSVYPMSKLN-----------PTQSIGLLLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLS-TCTYLPAAYYGAKLVGEN 123
            M+P+I+N LA I G ++  +   +I  +GH++ P+  ++           PT      +F   ++  G++ G    A +AAT++M++ +G+GVL  + G+     +P P WF +    C Y+P A+ G K+  +N
Sbjct:    1 MNPIIRNILAIIAGWLVGSIVNMSIVKIGHTLLPIENIDTNNLKELATIMPTLDAKHFIFPFVAHALGTLGGALVAALIAATHKMKIALGIGVLFLIGGILASYMLPAPTWFIITDLACAYIPMAWIGGKIASKN 135          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A3M9MR93_9BACT (Uncharacterized protein n=1 Tax=Rufibacter immobilis TaxID=1348778 RepID=A0A3M9MR93_9BACT)

HSP 1 Score: 69.7 bits (169), Expect = 1.100e-12
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 0
Query:    6 KNALAFIVGLIMSVVAISAIQSLGHSVYPM---SKLNPTQS---------IGLLLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTCTYLPAAYYGAKL 119
            ++ L+ + G  + V  IS +Q L H +YP+   S  N  Q+         +  LL V  +Y  G+  GG   A+ A    +   + +G LL V G+ NL+ +PHPLWF V+S   YLP A++G  +
Sbjct:    3 RSILSVLGGAAVGVFTISLVQFLSHQLYPLPTNSNPNDPQAMATFMTNAPVAALLLVLLAYALGAFFGGMVAARYATARPVLHALLVGALLLVAGIANLVQIPHPLWFTVISLAIYLPMAFFGGMM 128          
BLAST of Gvermi6415.t1 vs. uniprot
Match: UPI001F4951D7 (hypothetical protein n=2 Tax=Algoriphagus aestuariicola TaxID=1852016 RepID=UPI001F4951D7)

HSP 1 Score: 70.5 bits (171), Expect = 1.610e-12
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIMS-VVAISAIQSLGHSVYPMSKLNPTQSIGL---LLFVEASYLF--------GSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTC-TYLPAAYYGAKLVGENES 125
            MHP++KN LA IVG+++  VV    I +    + P    + T + GL   +  +E  + F        G+++G F T K+AA Y+M L + +G+L  + G+ +++ MP PLWF V+     Y+P A+ GAKL G   +
Sbjct:   34 MHPVLKNFLAVIVGMLIGGVVNGLLIMNSAAIISPPRGADLTTAEGLTAAMALMEPKHFFVPFLAHALGTLVGAFVTVKIAANYKMPLALLIGLLFLIGGIYSVMTMPSPLWFNVVDLLGAYIPMAWIGAKLAGAKPT 171          
BLAST of Gvermi6415.t1 vs. uniprot
Match: A0A5F1YU93_9LEPT (Uncharacterized protein n=1 Tax=Leptospira gomenensis TaxID=2484974 RepID=A0A5F1YU93_9LEPT)

HSP 1 Score: 69.3 bits (168), Expect = 1.650e-12
Identity = 45/132 (34.09%), Postives = 68/132 (51.52%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIM-SVVAISAIQSLGHSVYPMSKLNPTQSIGL-----------LLFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTC-TYLPAAYYGAKL 119
            M+P+ +N LAF+ G ++ S V ++ +   GH + P +  + T   GL             F   ++  G+  G F TAK+AAT R+ L  G+G+L  + G+ N I +P P+WF VL     YLP AY    L
Sbjct:    1 MNPIFRNILAFLAGAVVGSAVNMAIVTVSGHIIPPPNGADVTTMEGLKASLHLFEPKHFFFPFLAHALGTFFGAFVTAKIAATRRLLLAAGIGILFLIGGIANTILLPSPVWFTVLDLLGAYLPVAYLAGIL 132          
BLAST of Gvermi6415.t1 vs. uniprot
Match: UPI000423189B (hypothetical protein n=1 Tax=Algoriphagus mannitolivorans TaxID=226504 RepID=UPI000423189B)

HSP 1 Score: 67.8 bits (164), Expect = 7.800e-12
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 0
Query:    1 MHPLIKNALAFIVGLIMS-VVAISAIQSLGHSVYPMSKLNPTQSIGLL-----------LFVEASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLWFAVLSTC-TYLPAAYYGAKLVGENE 124
            MHP++KN +A +VGL++   V +  I   G  + P    N T   GL+           LF   ++  G+++G F TAKLA  ++  L + +G +  + G  N++++P PLWF V+     Y P A+ GA L G  +
Sbjct:    1 MHPILKNFIAIVVGLLIGGTVNMGLIMISGSIIPPPEGANLTTMEGLIEAMPLMQPKHFLFPFLAHALGTLVGAFITAKLAVKFKWYLALFIGFMFFIGGTINVMSLPSPLWFNVVDLLGAYFPMAWIGASLAGVKK 137          
The following BLAST results are available for this feature:
BLAST of Gvermi6415.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5M8QHY3_9BACT1.110e-1535.38Uncharacterized protein n=1 Tax=Rufibacter glacial... [more]
A0A348Y1V4_9FLAO3.450e-1538.64Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A0A2MEJ9_9FLAO7.570e-1534.85Signal peptide protein n=1 Tax=Flavobacterium sunc... [more]
A0A839GH09_9BACT2.480e-1434.92Uncharacterized protein n=1 Tax=Rufibacter quisqui... [more]
A0A850KZQ3_9GAMM9.390e-1434.13Uncharacterized protein n=1 Tax=Kangiellaceae bact... [more]
A0A7H8PS50_9FLAO3.180e-1328.15Uncharacterized protein n=1 Tax=Aquimarina sp. TRL... [more]
A0A3M9MR93_9BACT1.100e-1233.33Uncharacterized protein n=1 Tax=Rufibacter immobil... [more]
UPI001F4951D71.610e-1234.06hypothetical protein n=2 Tax=Algoriphagus aestuari... [more]
A0A5F1YU93_9LEPT1.650e-1234.09Uncharacterized protein n=1 Tax=Leptospira gomenen... [more]
UPI000423189B7.800e-1232.12hypothetical protein n=1 Tax=Algoriphagus mannitol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:606515..606901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6415.t1Gvermi6415.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 606515..606901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6415.t1 ID=Gvermi6415.t1|Name=Gvermi6415.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=129bp
MHPLIKNALAFIVGLIMSVVAISAIQSLGHSVYPMSKLNPTQSIGLLLFV
EASYLFGSMLGGFCTAKLAATYRMELVMGLGVLLTVFGVQNLIAMPHPLW
FAVLSTCTYLPAAYYGAKLVGENESPFV*
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