Gvermi6399.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6399.t1
Unique NameGvermi6399.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length229
Homology
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IRX9_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 1.960e-90
Identity = 131/201 (65.17%), Postives = 149/201 (74.13%), Query Frame = 0
Query:   27 CGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRV 227
            C   A Y + F N LT R+FG  IP+ GLV+SP+ GASHS RVS+LTVR  ASPQ+EQIAETG N R   LA+HLRD  +GVK+V  A+GPT PG  TTLRFTVDCEHPF++ VGMIAPSPDWLV V N NL  +GRF+        AYDAGTDDG +FT P DA LDMPSEP KNIAPLVED TDPF GR +G Y I+RV
Sbjct:   35 CSGQAEYVVNFTNFLTPRRFGRRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGRFISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IUA8_9FLOR (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 5.170e-88
Identity = 129/228 (56.58%), Postives = 167/228 (73.25%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M  ++ + LL+ AL  AV+A      C   A+Y +TFRN+LT   FG  IP  GLVFSP+ GASHS R+S LT+RG+ASPQ+EQIAETG N R   LA++LR   +GV+SV +A GPT PG+ TTL +TVDC HPF++ +GMIAPSPDW+V + N+N+   G+F+    G + AYDAGTDDG +FT P+DA LDMP+EP KNIAPLVED+TD F+GR VG + IQ++K
Sbjct:    1 MIHQVTAFLLSLALFQAVAAER---RCRGKAIYKVTFRNLLTPANFGKLIPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGKFITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKIK 225          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IS06_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 4.220e-87
Identity = 130/228 (57.02%), Postives = 165/228 (72.37%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M R+L++ +L  A+   V A G    C   A+Y +TFRN+LT   FG+ IP+ GLVFSP+ GASHS R+S  T+RG+ASPQ+EQIAETG N R  +LA++L+ + +GV SV AANGPT PG  TTL F VDC HPF++ +GMIAPSPDW+V + N+ L   G F+    G L AYD GTDDG +FT P+DA LDMP+EP +NIAPLVED+TD F GR VG ++IQRVK
Sbjct:    1 MIRKLIAFVLALAVFEVVLAEG---HCTGRALYRVTFRNLLTPENFGDLIPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLIRDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRVK 225          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IT76_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 265 bits (676), Expect = 1.210e-86
Identity = 128/228 (56.14%), Postives = 164/228 (71.93%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M R++   LL+ AL+ AVSA G    C   A+Y ++F+N+LT + FGN IP+ GLVFSP+ GASHS R+S LT+RG+ASPQ+EQIAETG N R   LA++LR   +GV  V AA GPT PG  T L + VDC HPF++ +GMIAPSPDW+V + N+N+   G+F+    G L AYD GTD G +FT P+DA LDMP+EP  NIAPLVED+TD F+GR VG + IQR+K
Sbjct:    1 MIRQVTVFLLSLALLQAVSADG---HCSGKAIYRVSFQNLLTPKNFGNLIPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGKFITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRIK 225          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IT49_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 262 bits (670), Expect = 9.840e-86
Identity = 129/228 (56.58%), Postives = 161/228 (70.61%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M R++ +  L   L+H V   G    C   AVY ++F N+LT   FG  IPQ GLVFSP+ GASHS R+S LTVRG+AS Q+EQIAETGDN R   +A++LR    GV  V AANGPT PG+ TTL + VDC HPF++ +GMIAPSPDW+V + N+N+   G+FV   +G L AYDAGTDDG +FT P DA +D PSEP KNIAPLVED+TD F+GR VG + IQR++
Sbjct:    1 MMRQVTAFFLVLTLVHVVPVEG---RCSGRAVYRVSFHNLLTPENFGKLIPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGKFVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRIR 225          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IRW7_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 2.340e-81
Identity = 125/228 (54.82%), Postives = 159/228 (69.74%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M R++L+  LT AL      A V  GC   AVY ++F N+LT   FG  IP  GLVFSP+ GASHS R S  T+RG+ASPQ+EQIAETG N R    A +L    K V+SV +A+GPT PG  T+L FTVDC  PF++ +GM+APSPDW+V + N+N+F  G F+ S  G L AYD GTDDG +FT P+DA LD+P+EP KNIAPLVED+TD F GR +GT+ I++V+
Sbjct:    1 MIRKVLAVFLTLALFE----AAVGSGCSGQAVYQVSFTNLLTPENFGELIPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGK-VRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMFRDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKVE 223          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IRX0_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 236 bits (601), Expect = 2.750e-75
Identity = 119/228 (52.19%), Postives = 155/228 (67.98%), Query Frame = 0
Query:    1 MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            M R++ +  L+ AL  AV+ +     C   AVY +TF N+LT+  FG+ IP  GLVFSP+ GASHS R S  T+RG+ASPQ+EQIAETG N R    A++++   K V +V AA+GP+ PG  T+L F VDC  PF++ +GMIAPSPDW+V + N+N+F  G F+    G L AYD GTDDG +FT P DA LDMP+EP  NI PLVED+TD F GR VG + I R++
Sbjct:    1 MIRQVTAFFLSLALFQAVAESA----CSGRAVYRVTFTNLLTAENFGDLIPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGK-VFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMFRNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRIQ 223          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IF45_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 231 bits (589), Expect = 1.880e-73
Identity = 116/202 (57.43%), Postives = 139/202 (68.81%), Query Frame = 0
Query:   27 CGSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQN-LFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRV 227
            C   AVY + F NMLT + FG+ IP+ GL FSP+   SHS R S LTVRG+ASPQ+EQIAETG N R   LA++L+ A +GV+ V    G   PG   T+  TV+CE+PF++ + MIAPSPDW+V V N N L M G F + + G L AYDAGTDDGGDFT   DA  DMPSEP KNIAPL ED+TDPF GR VGTY   R+
Sbjct:   23 CSGEAVYQVIFNNMLTPQTFGSKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMG-AGPGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A2V3IFK3_9FLOR (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 9.750e-45
Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   97 LAQHLRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPLVEDKTDPFRGRAVGTYFIQRVK 228
            +A++LR    GV  V AANGPT PG+ TTL + VDC HPF+  +GMIAPSP+W+V   N+N+    +FV   +G L A DAGTDDG +FT P DA  D PSEP KNIAPLVED+ D F  R VG + IQR++
Sbjct:    1 MARNLRSQRHGVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNMLRDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRIR 132          
BLAST of Gvermi6399.t1 vs. uniprot
Match: A0A151E591_9ARCH (Spondin domain-containing protein n=1 Tax=Thermoplasmatales archaeon SG8-52-4 TaxID=1803819 RepID=A0A151E591_9ARCH)

HSP 1 Score: 100 bits (249), Expect = 2.270e-22
Identity = 76/214 (35.51%), Postives = 106/214 (49.53%), Query Frame = 0
Query:   24 VPGC--GSPAVYTITFRNMLTSRQFGNSIPQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQHLRDANKGVKSVVAANG-PTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWLVLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPPKNIAPL------VEDKTDPFRGRAVGTYFIQRVK 228
            VPGC       Y +TF    +     +  P     FS + GASH+  V+       +SP I+ +AETGD   L  L       NK    +++  G  T PG   ++ F V  E+P V+ V MIAPSPDW V V + NLF +G FV      L+AYDAGTD+G ++T P +     PS+PP  I  +       ED+  P     +GT+  ++VK
Sbjct:   21 VPGCIEKDTVTYEVTFTATWSEETHPDDFPSNPH-FSGLIGASHNEEVAFWKEGELSSPGIKNMAETGDKSPL-NLEIGNAILNKTAFKLISGGGISTSPGS-VSVEFKVSEEYPLVTLVTMIAPSPDWFVGVDSLNLFEEGAFVNEKTVVLYAYDAGTDNGTNYTSPNE-----PSDPPVPIFKIEGYPFFYEDELVP-----LGTFTFKKVK 221          
The following BLAST results are available for this feature:
BLAST of Gvermi6399.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX9_9FLOR1.960e-9065.17Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA8_9FLOR5.170e-8856.58Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS06_9FLOR4.220e-8757.02Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT76_9FLOR1.210e-8656.14Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT49_9FLOR9.840e-8656.58Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW7_9FLOR2.340e-8154.82Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX0_9FLOR2.750e-7552.19Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IF45_9FLOR1.880e-7357.43Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK3_9FLOR9.750e-4555.30Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A151E591_9ARCH2.270e-2235.51Spondin domain-containing protein n=1 Tax=Thermopl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 31..206
e-value: 2.8E-30
score: 105.8
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 21..213
score: 25.597559
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 25..215
e-value: 2.8E-42
score: 146.7
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 30..206
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 30..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:471699..472385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6399.t1Gvermi6399.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 471699..472385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6399.t1 ID=Gvermi6399.t1|Name=Gvermi6399.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=229bp
MFRRLLSCLLTAALIHAVSAAGVVPGCGSPAVYTITFRNMLTSRQFGNSI
PQGGLVFSPITGASHSGRVSILTVRGYASPQIEQIAETGDNRRLAKLAQH
LRDANKGVKSVVAANGPTRPGQRTTLRFTVDCEHPFVSFVGMIAPSPDWL
VLVANQNLFMQGRFVKSVWGKLFAYDAGTDDGGDFTDPLDAGLDMPSEPP
KNIAPLVEDKTDPFRGRAVGTYFIQRVK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf