Gvermi6342.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6342.t1
Unique NameGvermi6342.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length83
Homology
BLAST of Gvermi6342.t1 vs. uniprot
Match: R7Q390_CHOCR (40S ribosomal protein S21 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q390_CHOCR)

HSP 1 Score: 144 bits (363), Expect = 1.690e-43
Identity = 64/82 (78.05%), Postives = 79/82 (96.34%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKGYYETTK 82
            MQN+KG+VVDLYIPRKCSASNRLITAKDHASVQIN+ RVD+NGV++GE+DTIA+CG+VRRKGLSD+AFYR+ +DKG+++ TK
Sbjct:    1 MQNEKGDVVDLYIPRKCSASNRLITAKDHASVQINVGRVDENGVLTGEFDTIALCGFVRRKGLSDDAFYRLVRDKGFFDETK 82          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A5J4Z5Q6_PORPP (40S ribosomal protein S21 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Q6_PORPP)

HSP 1 Score: 116 bits (290), Expect = 3.770e-32
Identity = 51/76 (67.11%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKG 76
            MQNDK E+VDLYIPRKCSA+NR++TAKDH+SVQIN+  VD++G  +GEY+TIA+CG +R KGL D++ YR+AK KG
Sbjct:    1 MQNDKKEIVDLYIPRKCSATNRILTAKDHSSVQINVGLVDEDGRYTGEYETIALCGMIRGKGLGDDSIYRLAKQKG 76          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A1X6P5C6_PORUM (40S ribosomal protein S21 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5C6_PORUM)

HSP 1 Score: 111 bits (277), Expect = 2.480e-30
Identity = 49/75 (65.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDK 75
            MQNDK EVVDLYIPRKCSA+NRLITAKDHA+VQ+N+ +VDD G ++GE +T A+CG++R KGL D+   R+ K+K
Sbjct:    1 MQNDKKEVVDLYIPRKCSATNRLITAKDHAAVQLNVGKVDDQGRLTGEVETFALCGFIRTKGLGDDCLNRLVKEK 75          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A0L0RYP8_ALLM3 (40S ribosomal protein S21 n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RYP8_ALLM3)

HSP 1 Score: 109 bits (272), Expect = 1.430e-29
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKGY 77
            MQNDKG++VDLYIPRKCSA+ RLITAKDH+SVQINIA VD+NGV++G++ T A  G VRR G SD++  R+A+  GY
Sbjct:    1 MQNDKGDIVDLYIPRKCSATGRLITAKDHSSVQINIADVDENGVMTGDFHTFAFSGAVRRAGESDDSLNRLAQQSGY 77          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A0S6XI99_BLOB1 (Uncharacterized protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XI99_BLOB1)

HSP 1 Score: 108 bits (269), Expect = 2.350e-28
Identity = 49/80 (61.25%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKGYYET 80
            M+N++GE+VDLY+PRKCSA+NR+I AKDHASVQI+IA+VD+NG  +GE  T A+CG+VR  G SD+AF R+A+  GY ++
Sbjct:    1 MENERGELVDLYVPRKCSATNRIIKAKDHASVQISIAKVDENGRYTGENQTYALCGFVRAMGESDDAFNRLAQRDGYLKS 80          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A7I8JHR5_SPIIN (40S ribosomal protein S21 n=2 Tax=Lemnoideae TaxID=284551 RepID=A0A7I8JHR5_SPIIN)

HSP 1 Score: 105 bits (263), Expect = 2.930e-28
Identity = 46/75 (61.33%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDK 75
            MQN++G+++DLYIPRKCSA+NRLITAKDHASVQ+NI  +D+NG+ +G+Y TIA+CGY+R +G  D A  R+ + K
Sbjct:    1 MQNEEGQMMDLYIPRKCSATNRLITAKDHASVQVNIGHLDENGIYTGQYTTIALCGYIRSQGDGDSALDRLWQKK 75          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A6A6HH30_9PEZI (40S ribosomal protein S21 n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6HH30_9PEZI)

HSP 1 Score: 104 bits (260), Expect = 9.660e-28
Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKGY 77
            MQN+KG+VVDLY+PRKCSA+NR+I AKDHASVQI++ +VD+NG  +GE  T A+CG+VR  G SD++  R+A+  GY
Sbjct:    1 MQNEKGDVVDLYVPRKCSATNRIIKAKDHASVQISVGKVDENGRYTGENQTYALCGFVRAMGESDDSINRLAQRDGY 77          
BLAST of Gvermi6342.t1 vs. uniprot
Match: G1XE75_ARTOA (40S ribosomal protein S21 n=3 Tax=Orbiliaceae TaxID=47021 RepID=G1XE75_ARTOA)

HSP 1 Score: 104 bits (260), Expect = 1.020e-27
Identity = 45/76 (59.21%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKG 76
            M+ND+G++VDLY+PRKCSA+NR+I AKDHASVQI++A+VD+NG  +GE+ T A+CG+VR +G +D++F R+A+  G
Sbjct:    1 MENDQGQLVDLYVPRKCSATNRIIKAKDHASVQISVAKVDENGRATGEHITYALCGFVRSRGEADDSFNRLAQRDG 76          
BLAST of Gvermi6342.t1 vs. uniprot
Match: W7HU56_9PEZI (40S ribosomal protein S21 n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HU56_9PEZI)

HSP 1 Score: 104 bits (259), Expect = 1.490e-27
Identity = 48/77 (62.34%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNG-VVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKG 76
            M+NDKGE+VDLY+PRKC+A+NR+I AKDHASVQI+IA+VD+NG  +SGE+ T ++CGYVR +G SD++  R+A+  G
Sbjct:    1 MENDKGELVDLYVPRKCAATNRIIKAKDHASVQISIAKVDENGRYISGEHITYSLCGYVRSRGESDDSLNRLAQRDG 77          
BLAST of Gvermi6342.t1 vs. uniprot
Match: A0A2S6BVC1_9PEZI (40S ribosomal protein S21 n=2 Tax=Cercospora TaxID=29002 RepID=A0A2S6BVC1_9PEZI)

HSP 1 Score: 103 bits (258), Expect = 1.950e-27
Identity = 46/77 (59.74%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYDTIAICGYVRRKGLSDEAFYRIAKDKGY 77
            M+N++GE+VDLY+PRKCSA+NR+I AKDHASVQI++A+VD+NG  +GE  T A+CG+VR  G SD+A  R+A+  G+
Sbjct:    1 MENERGELVDLYVPRKCSATNRIIKAKDHASVQISVAKVDENGRATGENQTYALCGFVRAMGESDDAINRLAQRDGF 77          
The following BLAST results are available for this feature:
BLAST of Gvermi6342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q390_CHOCR1.690e-4378.0540S ribosomal protein S21 n=1 Tax=Chondrus crispus... [more]
A0A5J4Z5Q6_PORPP3.770e-3267.1140S ribosomal protein S21 n=1 Tax=Porphyridium pur... [more]
A0A1X6P5C6_PORUM2.480e-3065.3340S ribosomal protein S21 n=1 Tax=Porphyra umbilic... [more]
A0A0L0RYP8_ALLM31.430e-2966.2340S ribosomal protein S21 n=2 Tax=Allomyces macrog... [more]
A0A0S6XI99_BLOB12.350e-2861.25Uncharacterized protein n=1 Tax=Fungal sp. (strain... [more]
A0A7I8JHR5_SPIIN2.930e-2861.3340S ribosomal protein S21 n=2 Tax=Lemnoideae TaxID... [more]
A0A6A6HH30_9PEZI9.660e-2861.0440S ribosomal protein S21 n=1 Tax=Viridothelium vi... [more]
G1XE75_ARTOA1.020e-2759.2140S ribosomal protein S21 n=3 Tax=Orbiliaceae TaxI... [more]
W7HU56_9PEZI1.490e-2762.3440S ribosomal protein S21 n=1 Tax=Drechslerella st... [more]
A0A2S6BVC1_9PEZI1.950e-2759.7440S ribosomal protein S21 n=2 Tax=Cercospora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 1..82
e-value: 5.0E-37
score: 123.9
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..77
e-value: 6.2E-38
score: 128.9
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..77
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..82
e-value: 1.9E-38
score: 132.2
NoneNo IPR availablePANTHERPTHR10442:SF040S RIBOSOMAL PROTEIN S21coord: 1..77
IPR018279Ribosomal protein S21e, conserved sitePROSITEPS00996RIBOSOMAL_S21Ecoord: 11..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:182127..182476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6342.t1Gvermi6342.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 182127..182476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6342.t1 ID=Gvermi6342.t1|Name=Gvermi6342.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=83bp
MQNDKGEVVDLYIPRKCSASNRLITAKDHASVQINIARVDDNGVVSGEYD
TIAICGYVRRKGLSDEAFYRIAKDKGYYETTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001931Ribosomal_S21e
IPR038579Ribosomal_S21e_sf
IPR018279Ribosomal_S21e_CS