Gvermi6066.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6066.t1
Unique NameGvermi6066.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length183
Homology
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A0M6Z0Z2_9HYPH (Chitooligosaccharide deacetylase n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M6Z0Z2_9HYPH)

HSP 1 Score: 196 bits (498), Expect = 1.600e-57
Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M++ +F+E FG++FEHSPW+A+R+F   +   HD  A +H  LCR FR+A+ EERL VL AH DLAGKLA+A RLT  S+ EQASAGLN LTDE+R+  T LN  Y EKHGFPFIIAVR+H K  I+EAF RR+ ND   E  EAC+QVE IARWR+ +++
Sbjct:  310 MAKQEFVENFGSIFEHSPWIAERAFDLELGPAHDCAAGVHNALCRMFRSASEEERLGVLTAHPDLAGKLAQAGRLTSESTSEQASAGLNLLTDEERETLTHLNTTYVEKHGFPFIIAVRDHDKASIMEAFHRRIDNDRETEFREACRQVERIARWRLMDVL 470          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A4S3M8U1_9RHOB (Chitooligosaccharide deacetylase n=1 Tax=Youngimonas vesicularis TaxID=1294297 RepID=A0A4S3M8U1_9RHOB)

HSP 1 Score: 195 bits (495), Expect = 4.080e-57
Identity = 95/161 (59.01%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M  + F+ ++G++FEHS W+A R+F   +   HD PA +H  L R FR+AT +ERL VL+AH DLAGKLA AKRLT  S+ EQ+SAGL+ALTD++R  FT LNQ YT+KHGFPFIIAVR+HTK  ILE F+RR+ ND+ +E++EACKQVE IAR R+E ++
Sbjct:  307 MDRATFVTKYGSIFEHSAWIADRAFDLELGPAHDTPAGLHNALARIFRSATPDERLGVLRAHPDLAGKLAAAKRLTADSTAEQSSAGLDALTDQERADFTQLNQDYTQKHGFPFIIAVRDHTKASILENFKRRVNNDTEIELQEACKQVERIARLRLEPLL 467          
BLAST of Gvermi6066.t1 vs. uniprot
Match: UPI001AD8FD1F (allantoinase PuuE n=1 Tax=Roseibium sediminis TaxID=1775174 RepID=UPI001AD8FD1F)

HSP 1 Score: 194 bits (493), Expect = 7.570e-57
Identity = 94/161 (58.39%), Postives = 119/161 (73.91%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M    F+  +G++FEHSPW+A R+F   +   HD  A +H +LCR FR A+ EERL VL AH DLAGKLA+A RLT  S+ EQA AGLN LTDE+R+ FT LNQ Y +KHGFPFIIAVR+HTK  ILEAFERR+ ND   E  EAC+QVE IA++R+++++
Sbjct:  303 MDRETFVGSYGSIFEHSPWIADRAFDLELGPAHDCAAGVHNVLCRMFRTASSEERLGVLNAHPDLAGKLAQAGRLTAESTSEQAGAGLNMLTDEERETFTRLNQVYMDKHGFPFIIAVRDHTKASILEAFERRIANDRETEFAEACRQVERIAQFRLQDVL 463          
BLAST of Gvermi6066.t1 vs. uniprot
Match: X7EF61_9RHOB (Chitooligosaccharide deacetylase n=1 Tax=Roseivivax halodurans JCM 10272 TaxID=1449350 RepID=X7EF61_9RHOB)

HSP 1 Score: 194 bits (492), Expect = 1.220e-56
Identity = 99/158 (62.66%), Postives = 120/158 (75.95%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIE 157
            M  ++F+E FG ++EHSPW+A+R+F   +   HD PA +   L R FR AT EERL VL+AH DLAGKLA AKRLT+ SS EQASAGL+ALTD++R+ FT LN  YT KHG PFIIAVR+H K GIL AFERRL NDS+ E+ EAC+QVE IAR R+E
Sbjct:  310 MDRARFVEAFGGIYEHSPWIAERAFDLELGPAHDRPAGLANALARIFRTATEEERLGVLRAHPDLAGKLAGAKRLTEASSSEQASAGLDALTDDERETFTRLNDAYTAKHGIPFIIAVRDHDKAGILAAFERRLENDSASEIGEACRQVERIARLRLE 467          
BLAST of Gvermi6066.t1 vs. uniprot
Match: UPI001C93FB49 (allantoinase PuuE n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C93FB49)

HSP 1 Score: 194 bits (492), Expect = 1.220e-56
Identity = 98/161 (60.87%), Postives = 122/161 (75.78%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M   +F+ +FG ++EHSPWVA+R++   +   HD PA +   L R FR AT EERL VL+AH DLAGKLA AKRLT  S+ EQASAGL+ALTDE+R +FT LN  YTEKHG PFIIAVR+H KQGIL+AF RRL NDS+ E +EAC+QVE IAR R++ ++
Sbjct:  310 MDRDRFVARFGGIYEHSPWVAERAWDMELGPAHDRPAGLSNALARAFRRATPEERLAVLRAHPDLAGKLAAAKRLTADSTAEQASAGLDALTDEERARFTDLNSAYTEKHGHPFIIAVRDHDKQGILDAFTRRLENDSAQEFDEACRQVERIARLRLDALL 470          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A4R5EQV7_9RHOB (Chitooligosaccharide deacetylase n=1 Tax=Antarcticimicrobium sediminis TaxID=2546227 RepID=A0A4R5EQV7_9RHOB)

HSP 1 Score: 193 bits (491), Expect = 1.750e-56
Identity = 97/161 (60.25%), Postives = 123/161 (76.40%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M  ++F+E FG++FEHSPW+A+R+F+  +   HD+   +   L R FR+A+ EERL VL+AH DLAGKLA AKRLT  SS EQASAGL+ALTDE+R+ FT LN  Y EKHGFPFIIAVR+H K GIL AFERR  NDS+ E  EACKQVE IA+ R+++++
Sbjct:  310 MDHARFVEAFGSIFEHSPWIAERAFALELGPAHDSAVGLQNALARAFRSASREERLGVLRAHPDLAGKLASAKRLTAESSNEQASAGLDALTDEERETFTRLNTLYMEKHGFPFIIAVRDHDKAGILAAFERRQANDSAAEFGEACKQVERIAKIRLQDML 470          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A1V0RQQ7_9RHOB (2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=4 Tax=Roseovarius TaxID=74030 RepID=A0A1V0RQQ7_9RHOB)

HSP 1 Score: 184 bits (467), Expect = 1.950e-56
Identity = 91/161 (56.52%), Postives = 118/161 (73.29%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M   +F+ QFG VFEHSPW+A+R++   ++  HD+   +H  LCR FR+AT  ERL VL+AH DLAGKLA+A+RLT  SS EQASAGL+ALTD +R  F  LN  Y  +HGFPFIIAVR+H K GI +AF RR+  DS+ E  EAC+QVE IA WR+++++
Sbjct:    9 MDRDRFVAQFGGVFEHSPWIAERAYDLGISPRHDSALGLHDALCRVFRDATEVERLTVLRAHPDLAGKLAQARRLTAASSHEQASAGLDALTDAERAAFERLNAAYIARHGFPFIIAVRDHDKAGIRDAFARRVDQDSATEQAEACRQVERIAFWRLQDML 169          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A6F8QCN9_9RHOB (Chitooligosaccharide deacetylase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8QCN9_9RHOB)

HSP 1 Score: 193 bits (490), Expect = 2.410e-56
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M    F+ +FG ++EHSPW+A R++   +   HD PA +   L R FR AT +ERL+VL+AH DLAGKLA A+RLT  S+ EQASAGL+ALTDE+R +FT LN  YTEKHGFPFIIAVR+H KQGIL AFERRL NDS  E  EAC+QVE IAR R++ ++
Sbjct:  310 MDRDTFVTRFGGIYEHSPWIADRAWDLELGPAHDRPAGLANALARAFRRATQQERLDVLRAHPDLAGKLAAARRLTTESTAEQASAGLDALTDEERARFTELNDAYTEKHGFPFIIAVRDHDKQGILAAFERRLGNDSETEFTEACRQVERIARLRLDALL 470          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A521CEW5_9RHOB (Chitooligosaccharide deacetylase n=1 Tax=Thalassobius litoralis TaxID=1010611 RepID=A0A521CEW5_9RHOB)

HSP 1 Score: 192 bits (487), Expect = 6.700e-56
Identity = 96/161 (59.63%), Postives = 120/161 (74.53%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M    F+ +FG +FEHS W+A R+F   + + HD+PA +H  L R FR AT +ER+ VL+AH DLAGKLA AKRLT  S+ EQASAGL+ALTD++ Q FT LN  YT+KHGFPFIIAVR+HTK  ILE F+RR+ NDS  E  EACKQVE IAR R+E+++
Sbjct:  310 MDRETFVARFGGIFEHSAWIADRAFDLELGAAHDSPAGVHNALTRIFRAATPDERMGVLRAHPDLAGKLAAAKRLTAESTAEQASAGLDALTDQEHQDFTQLNNAYTQKHGFPFIIAVRDHTKATILENFKRRVNNDSDTEFAEACKQVERIARLRLEDML 470          
BLAST of Gvermi6066.t1 vs. uniprot
Match: A0A2T6AZI4_9RHOB (Chitooligosaccharide deacetylase n=1 Tax=Allosediminivita pacifica TaxID=1267769 RepID=A0A2T6AZI4_9RHOB)

HSP 1 Score: 192 bits (487), Expect = 6.840e-56
Identity = 99/161 (61.49%), Postives = 121/161 (75.16%), Query Frame = 0
Query:    1 MSESQFIEQFGTVFEHSPWVAQRSFS-SVTSLHDNPADIHMILCRTFRNATGEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTTLNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEAIARWRIENII 160
            M  ++FIE+FG V+EHSPWVA+R+F   +   HD PA +   L R FR+A+ EERL VL+AH DLAGKLA AKRLT  S+ EQASAGL+ALTD +R +FT LN+ Y  +HGFPFIIAVR+H K GIL+AFERRL  DS  E  EAC+QVE IAR R+E +I
Sbjct:  311 MPAARFIERFGGVYEHSPWVAERAFDLELGPAHDRPAGLANALARAFRSASHEERLGVLRAHPDLAGKLAAAKRLTGESTAEQASAGLDALTDAERTRFTELNEAYVARHGFPFIIAVRDHDKAGILQAFERRLDQDSETEFAEACRQVERIARLRLETMI 471          
The following BLAST results are available for this feature:
BLAST of Gvermi6066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M6Z0Z2_9HYPH1.600e-5759.01Chitooligosaccharide deacetylase n=1 Tax=Roseibium... [more]
A0A4S3M8U1_9RHOB4.080e-5759.01Chitooligosaccharide deacetylase n=1 Tax=Youngimon... [more]
UPI001AD8FD1F7.570e-5758.39allantoinase PuuE n=1 Tax=Roseibium sediminis TaxI... [more]
X7EF61_9RHOB1.220e-5662.66Chitooligosaccharide deacetylase n=1 Tax=Roseiviva... [more]
UPI001C93FB491.220e-5660.87allantoinase PuuE n=3 Tax=Rhodobacterales TaxID=20... [more]
A0A4R5EQV7_9RHOB1.750e-5660.25Chitooligosaccharide deacetylase n=1 Tax=Antarctic... [more]
A0A1V0RQQ7_9RHOB1.950e-5656.522-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline deca... [more]
A0A6F8QCN9_9RHOB2.410e-5660.25Chitooligosaccharide deacetylase n=7 Tax=Roseobact... [more]
A0A521CEW5_9RHOB6.700e-5659.63Chitooligosaccharide deacetylase n=1 Tax=Thalassob... [more]
A0A2T6AZI4_9RHOB6.840e-5661.49Chitooligosaccharide deacetylase n=1 Tax=Allosedim... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018020Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylasePFAMPF09349OHCU_decarboxcoord: 1..156
e-value: 8.0E-38
score: 130.4
IPR0175802-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1TIGRFAMTIGR03164TIGR03164coord: 1..158
e-value: 2.2E-55
score: 185.0
IPR036778Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamilyGENE3D1.10.3330.10coord: 1..162
e-value: 6.9E-44
score: 151.8
IPR036778Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamilySUPERFAMILY158694UraD-Likecoord: 1..161
NoneNo IPR availablePANTHERPTHR434662-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATEDcoord: 1..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:2001984..2002532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6066.t1Gvermi6066.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 2001984..2002532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6066.t1 ID=Gvermi6066.t1|Name=Gvermi6066.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=183bp
MSESQFIEQFGTVFEHSPWVAQRSFSSVTSLHDNPADIHMILCRTFRNAT
GEERLNVLKAHSDLAGKLAKAKRLTKHSSEEQASAGLNALTDEQRQKFTT
LNQKYTEKHGFPFIIAVRNHTKQGILEAFERRLRNDSSVEMEEACKQVEA
IARWRIENIIRDYRHPNPKAQIDDKRKIQTKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018020OHCU_decarboxylase
IPR017580OHCU_decarboxylase-1
IPR036778OHCU_decarboxylase_sf