Gvermi5999.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5999.t1
Unique NameGvermi5999.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length295
Homology
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A2V3IJN1_9FLOR (Exosome complex component RRP43 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN1_9FLOR)

HSP 1 Score: 395 bits (1016), Expect = 3.450e-136
Identity = 202/294 (68.71%), Postives = 242/294 (82.31%), Query Frame = 0
Query:    1 MINEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRTEDALVLTEFLRTLISPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANG-FENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVISGG 293
            MI+E+ YRK+H +EYLKRFIDKDVRPDGRA++TAR  +LT  SINTAVGSALVR+G+TTVLAGV ATL+RP++ANPDKGIV +SVELL T+  ESRNVR E+A+VL EFLRTLI PHID+S  CVE  KLVW + LTVYCIDHDGNLEDSVVLAAVAALR+VRLP+VR+ D    G  ENG EN  M    NE  E NES +A+VS++RTESLE+D++PLTVSFQ+FCEKALIDPSAEEE VC SRVTF+++P+G +RGILK GGH  S +LY SCL QS++R  EY++ +  G
Sbjct:    1 MISEDVYRKVHPKEYLKRFIDKDVRPDGRAVSTARYLRLTIGSINTAVGSALVRLGNTTVLAGVNATLIRPNNANPDKGIVEVSVELLPTASGESRNVRGEEAVVLAEFLRTLIIPHIDVSTLCVEADKLVWCLSLTVYCIDHDGNLEDSVVLAAVAALRNVRLPTVRMVDGDEGGDIENGIENTRMIDADNEAEEGNESIMAVVSSKRTESLELDNFPLTVSFQLFCEKALIDPSAEEEVVCVSRVTFIMKPTGDMRGILKEGGHILSPKLYNSCLAQSKERVKEYMKKLQAG 294          
BLAST of Gvermi5999.t1 vs. uniprot
Match: R7QL29_CHOCR (Ribosomal RNA-processing protein 43 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL29_CHOCR)

HSP 1 Score: 297 bits (761), Expect = 1.660e-97
Identity = 151/282 (53.55%), Postives = 211/282 (74.82%), Query Frame = 0
Query:    2 INEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRT-EDALVLTEFLRTLISPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKR 282
            +++E ++K+H REYL RF++KDVRPDGR+LT AR   +T SSI TAVGSA+++MG TT +AGV ATLV+P    PD+GI++++VELL  +    ++ R+ E+A+ LTE+LR+LISPHI++SK CVE G LVW + LTVYC+D+DGNLED+++LA VAA+R+V LPSVR+  E+ +   +    ++ K +  E     ES +A+ + ERT SLE+D+YPL +SF +F  K LIDPS  EE VC SR+TF+ RP+G LRG+LKPGG N  E LY+SCLT +++R
Sbjct:    1 MDQEVFQKVHPREYLARFLNKDVRPDGRSLTKARRVNITVSSIATAVGSAMLKMGKTTAVAGVHATLVQPAPGAPDQGILDVAVELLPMASPNYKSGRSSEEAICLTEYLRSLISPHINMSKLCVEAGLLVWQLRLTVYCVDNDGNLEDAILLAGVAAMRNVLLPSVRIIGEEVDEGRDAQMVEV-KTENEEGXXXAESIIAVATVERTNSLEIDTYPLPISFILFDGKVLIDPSVAEESVCDSRITFLFRPTGELRGVLKPGGKNVPENLYQSCLTMAKER 281          
BLAST of Gvermi5999.t1 vs. uniprot
Match: A9RPF4_PHYPA (Ribosomal RNA-processing protein 43 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RPF4_PHYPA)

HSP 1 Score: 155 bits (392), Expect = 1.080e-41
Identity = 107/292 (36.64%), Postives = 166/292 (56.85%), Query Frame = 0
Query:    5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVR-TEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTD-------EQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGH-NFSEELYKSCLTQSQKRAAE 285
            EAY++++  ++ +R +D DVRPDGR LT AR   +   SI TA GSALV++G+TT+LAGV   ++ P  A+P++G V +  ++ S      R  R  E A V++E L   +  S  ++L + C+ PGK  W   + VYC+D DG+L D+ +LAAVAAL  ++LP+V++T+       +  NG + G E D +       A++NE  + + S +R   LE  S P+ ++     +  L DPSAEEE +    +T ++  SG L    KPGG    +    K C+  ++KR AE
Sbjct:   20 EAYKRLYPLQFYERHLDSDVRPDGRPLTRARPTSVNLGSIATADGSALVKIGNTTMLAGVKLEVITPSTASPNQGQVAVDFQMPSICSPLVRPGRPAEAAWVVSEQLSNALVSSNFVNLQQLCIVPGKAAWIAYVDVYCLDADGSLLDAALLAAVAALTHLQLPAVKVTETGRVVPLKNHNG-DAGQEVDSI-------AKKNEDQI-VKSRQR---LERSSMPIALTCVSHRKHLLADPSAEEESILQMSLTVIMDTSGRLISFYKPGGAVAATSATVKDCIELTKKRVAE 299          
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A0L0HN85_SPIPD (Ribosomal RNA-processing protein 43 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN85_SPIPD)

HSP 1 Score: 151 bits (382), Expect = 2.180e-40
Identity = 93/295 (31.53%), Postives = 160/295 (54.24%), Query Frame = 0
Query:    2 INEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVISG 292
            ++ E ++KIH  EY +RF+ + VRPDGR L+  R  K+T  +I TA GSA+ R+G TTV+ G+ A +  P    P  G +  + +L      + +    +E +  ++E++  ++  S  ++LS  C+E G+ VW +   + C++++GN  D+ +LA VAAL+ VRLP+                          T  E ++AV  V  +RT  L++   P++V+F +F  + ++ DP  EEE   +S++T ++  +G L G+LKPGG    +E   SCL  ++ RA   + ++ G
Sbjct:   30 LDSETFKKIHPTEYHRRFLSQGVRPDGRTLSRFRKAKITVGAITTAHGSAMARLGETTVVCGIKAEITEPKTGAPRDGFIVPNFDLPPLCSPQFKPGPPSELSQSISEYINRVLESSKLLNLSDLCIEEGRAVWVLYADIVCLNYEGNAMDAAMLALVAALKHVRLPTA-------------------------TFYEADNAVR-VKEQRTIPLKLSRTPISVTFGVFDGQFILADPDIEEEPHLSSQLTVIIEQNGGLCGMLKPGGSALGQETLTSCLEAARTRATHILGILEG 298          
BLAST of Gvermi5999.t1 vs. uniprot
Match: UPI0014589AD7 (exosome complex component RRP43-like n=2 Tax=Pectinidae TaxID=6566 RepID=UPI0014589AD7)

HSP 1 Score: 152 bits (383), Expect = 3.130e-40
Identity = 97/281 (34.52%), Postives = 147/281 (52.31%), Query Frame = 0
Query:   14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
            EY K+F++KDVRPDGR L   R   L    + TA GSALV++G+TT++ G+ A L  P  A PD+G +  +V+L        R    +E A VL++F+  +I  S  +D    CV PGKLVW +   + C+D+DGN+ D+ +LA +AA R+ RLP V   +E                            V  V+ E+T  L + S+P++ +F IF ++ L +DP+ EEE +    VT V     +   + KPGG     E   +C  ++  R+ E +R+I
Sbjct:   72 EYYKKFLEKDVRPDGRELGEFRRTVLNIGCVTTAEGSALVKLGNTTIMCGIKAELAAPKPAEPDRGFIVPNVQLTPLCSPHFRPGPPSEQAQVLSQFVAEVIKNSGCVDCKNLCVVPGKLVWVLNCDLMCLDYDGNVFDTAILALLAAFRNTRLPLVEEKEE----------------------------VTEVTMEKTAPLTVSSHPVSCTFSIFDDRILFVDPTVEEEGLATGMVTVVTVGEKICM-VHKPGGSPLKSEQLLTCFDRAFDRSREVLRLI 323          
BLAST of Gvermi5999.t1 vs. uniprot
Match: UPI001D090035 (exosome complex component RRP43-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D090035)

HSP 1 Score: 150 bits (380), Expect = 3.360e-40
Identity = 96/291 (32.99%), Postives = 154/291 (52.92%), Query Frame = 0
Query:    5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
            + Y+ I+  +Y K ++  ++RPDGR  T  R   L   SI+TA GSA+V++G+TTV+ G+ A L +P    PDKG +  +V+L   S S  R    ++ A V +  +  +I  +  IDL K C+ P +L W +   + C+D+DG + D+ V+A V+AL+ V+LP V   +E                            V  V  E  E LE+ + P+  +F IF ++ LI DP+AEEE +C   +T V+    V R + KPGG   S    ++C+ +++K+A   V +I+
Sbjct:    3 KQYKAINPVKYYKDYLSNNIRPDGRNFTKFRSIALNVDSISTADGSAIVKLGNTTVVCGIKAELCKPKAEEPDKGFLVPNVDLSPLSSSRFRPGPPSDQAQVFSRLVADIIIDTECIDLKKLCIHPDQLAWVLYCDIICLDYDGGVVDAAVIALVSALKTVKLPKVDFDEELFT-------------------------VKCVDVENKELLEVHAVPVANTFVIFDDEQLIVDPTAEEEDLCNGSITVVIVDDHV-RSVHKPGGVPISNINIEACIAETKKQAKYVVNLIN 267          
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A7M5X903_9CNID (Ribosomal RNA-processing protein 43 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X903_9CNID)

HSP 1 Score: 150 bits (378), Expect = 4.420e-40
Identity = 96/283 (33.92%), Postives = 149/283 (52.65%), Query Frame = 0
Query:   14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVR--TEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
            E+ K F+ ++VRPDGR L   R   L   SINTA GSALVR+G T V+ G++A L  P    PDKG    +V+L   SCS        ++DA +L++F+  +   S  + L   C+   KL W I   + CI HDGNL+D+++ A  AALR+ +LP+V   +E A+            +Q              V  ++   L + + P++ +F +F ++ L+ DP+ EEE++    +T V+   G L  + KPGG    EE  K C+  + KR AE + +++
Sbjct:   12 EFYKHFLKENVRPDGRELLKFRDALLNIGSINTARGSALVRLGHTMVICGISAELAEPKATTPDKGFFVPNVDL-PPSCSNKYRPGPPSDDAQILSQFVLDVATNSEVLKLENLCIATKKLAWVIYADIQCISHDGNLKDAIIAALYAALRNTKLPTVEYNEETAD------------VQ--------------VKQDQLFQLPIQTCPVSSTFALFQDEILLADPTNEEEEISNGTITIVVNSEGKLCMVSKPGGAEMKEEKLKVCIRTALKRHAEVLSLVT 267          
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A8B8DAH1_CRAVI (Ribosomal RNA-processing protein 43 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DAH1_CRAVI)

HSP 1 Score: 149 bits (377), Expect = 5.750e-40
Identity = 95/291 (32.65%), Postives = 157/291 (53.95%), Query Frame = 0
Query:    5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSES--RNVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
            + +R    +EY ++F++++VRPDGR L   R   +    ++TA GSALV++G+T V+ G+ A L +P    P  G +  +VEL S  CS      +  E A VL++F+  +I  S  ID+ K C+  GKLVW +   + C+D+DGN+ D+ VL+ +AAL +  LP V L +E  + FE                            E+  +LE+ S P++ ++ IF ++ L +DP+AEEE +   ++T V     +   + KPGG   +++    C+ Q+ KR+ E +R+I
Sbjct:    3 DDFRTARPKEYFRKFLEQEVRPDGRELGETRTTVINVGCLSTANGSALVKIGNTAVMCGIKAELAKPKTEEPSSGFLVPNVEL-SPMCSPQFRPGLPGEQARVLSQFMLEVIKNSKCIDVQKLCIVSGKLVWTLYCDIVCLDYDGNVTDACVLSLLAALNNTTLPKVTL-NEDTDKFE-------------------------AFPEQPSALELQSNPVSSTYAIFDDEILFVDPTAEEENLATGQLTIVTIQDKLCM-VHKPGGTPLTDQQLSLCIKQAFKRSTEVLRLI 265          
BLAST of Gvermi5999.t1 vs. uniprot
Match: R7TKM0_CAPTE (Ribosomal RNA-processing protein 43 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TKM0_CAPTE)

HSP 1 Score: 147 bits (372), Expect = 3.420e-39
Identity = 92/281 (32.74%), Postives = 145/281 (51.60%), Query Frame = 0
Query:   14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRTED-ALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
            EY  RF+++DVRPDGR L   R   L   SI+TA GSALV++G+T +L G+ A +V  +   P++GIV+ SV LL  S  + R+    D A   T F+  L+  S  +DL   C+E GK  WN+   + C+D+DGN+ D+  LA +AAL++  LP V + +E                          S    +  +    L +++ P++ +  IF +K L +DP+ EEE +    +T V +    +    KPGG +      + C+ +SQ R  E +++I
Sbjct:   12 EYYSRFLEQDVRPDGRDLGGIRPTTLNVGSIDTADGSALVKLGNTCILCGIKAEMVASNPETPEQGIVDSSVSLLPMSTPQFRDRPPVDLAPSCTHFIEQLLTCSGCLDLKDLCIEKGKHAWNLHCDLMCLDYDGNVLDACCLALIAALKNTVLPKVTIDEE--------------------------SGTVKLDAKEKHPLSVNAVPVSTTLAIFADKVLFVDPTQEEESLATGFITVVTKDDDHICMTYKPGGSSVQPSQMQDCIKRSQHRRPEVLQLI 266          
BLAST of Gvermi5999.t1 vs. uniprot
Match: G4TI07_SERID (Ribosomal RNA-processing protein 43 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TI07_SERID)

HSP 1 Score: 147 bits (371), Expect = 5.070e-39
Identity = 99/302 (32.78%), Postives = 154/302 (50.99%), Query Frame = 0
Query:    1 MINEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEK-ALIDPSAEEEKVCASRVTFVLRPSGVLR----GI---LKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
            M +   ++++H R YL+RF+D+ +RPDGR     R  +LTT SI+TA GSALVR+G TT++ GV A +  PD   P +G +  +VE+ +   +  +    +E+A +++E L  +I  S  + L   C+EP K VW I +   CI++DGN  D+ +LA   AL + +LP  R  D++                           + + S      L + + P   +F IF  K  L+DP++ EE +  S VT VL  S  +     G+     P G + S  LY  C+  +QKR AE +R +S
Sbjct:    1 MSDISTFQRLHPRAYLQRFLDEHLRPDGRRPLDCRPLELTTGSISTADGSALVRLGETTIVCGVKAEIAEPDLDAPTRGFIVPNVEISAICAARFKPGPPSEEAQIISEQLNQIIAKSKCLPLDSLCIEPRKAVWTIYIDAVCINYDGNALDATLLAMTTALSNTQLPQARYDDDKK--------------------------MVLCSRMNKTPLALKTLPTATTFGIFESKHLLVDPTSFEEPLLESTVTVVLCGSEAISVSQVGLGRETSPSGQS-STSLYTECIELAQKRQAEILRAVS 275          
The following BLAST results are available for this feature:
BLAST of Gvermi5999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJN1_9FLOR3.450e-13668.71Exosome complex component RRP43 n=1 Tax=Gracilario... [more]
R7QL29_CHOCR1.660e-9753.55Ribosomal RNA-processing protein 43 n=1 Tax=Chondr... [more]
A9RPF4_PHYPA1.080e-4136.64Ribosomal RNA-processing protein 43 n=1 Tax=Physco... [more]
A0A0L0HN85_SPIPD2.180e-4031.53Ribosomal RNA-processing protein 43 n=2 Tax=Spizel... [more]
UPI0014589AD73.130e-4034.52exosome complex component RRP43-like n=2 Tax=Pecti... [more]
UPI001D0900353.360e-4032.99exosome complex component RRP43-like n=1 Tax=Chrys... [more]
A0A7M5X903_9CNID4.420e-4033.92Ribosomal RNA-processing protein 43 n=1 Tax=Clytia... [more]
A0A8B8DAH1_CRAVI5.750e-4032.65Ribosomal RNA-processing protein 43 n=1 Tax=Crasso... [more]
R7TKM0_CAPTE3.420e-3932.74Ribosomal RNA-processing protein 43 n=1 Tax=Capite... [more]
G4TI07_SERID5.070e-3932.78Ribosomal RNA-processing protein 43 n=1 Tax=Serend... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 218..281
e-value: 1.3E-5
score: 25.2
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 35..165
e-value: 1.4E-16
score: 61.2
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 3..292
e-value: 1.7E-68
score: 233.0
IPR033196Exosome complex component Rrp43PANTHERPTHR11097:SF9EXOSOME COMPLEX COMPONENT RRP43coord: 8..290
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 8..290
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 6..240
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 212..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1746853..1747737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5999.t1Gvermi5999.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1746853..1747737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5999.t1 ID=Gvermi5999.t1|Name=Gvermi5999.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=295bp
MINEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGS
ALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRT
EDALVLTEFLRTLISPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDS
VVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESA
VAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVL
RPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVISGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015847ExoRNase_PH_dom2
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR033196Rrp43
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf