Gvermi5999.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A2V3IJN1_9FLOR (Exosome complex component RRP43 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN1_9FLOR) HSP 1 Score: 395 bits (1016), Expect = 3.450e-136 Identity = 202/294 (68.71%), Postives = 242/294 (82.31%), Query Frame = 0
Query: 1 MINEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRTEDALVLTEFLRTLISPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANG-FENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVISGG 293
MI+E+ YRK+H +EYLKRFIDKDVRPDGRA++TAR +LT SINTAVGSALVR+G+TTVLAGV ATL+RP++ANPDKGIV +SVELL T+ ESRNVR E+A+VL EFLRTLI PHID+S CVE KLVW + LTVYCIDHDGNLEDSVVLAAVAALR+VRLP+VR+ D G ENG EN M NE E NES +A+VS++RTESLE+D++PLTVSFQ+FCEKALIDPSAEEE VC SRVTF+++P+G +RGILK GGH S +LY SCL QS++R EY++ + G
Sbjct: 1 MISEDVYRKVHPKEYLKRFIDKDVRPDGRAVSTARYLRLTIGSINTAVGSALVRLGNTTVLAGVNATLIRPNNANPDKGIVEVSVELLPTASGESRNVRGEEAVVLAEFLRTLIIPHIDVSTLCVEADKLVWCLSLTVYCIDHDGNLEDSVVLAAVAALRNVRLPTVRMVDGDEGGDIENGIENTRMIDADNEAEEGNESIMAVVSSKRTESLELDNFPLTVSFQLFCEKALIDPSAEEEVVCVSRVTFIMKPTGDMRGILKEGGHILSPKLYNSCLAQSKERVKEYMKKLQAG 294
BLAST of Gvermi5999.t1 vs. uniprot
Match: R7QL29_CHOCR (Ribosomal RNA-processing protein 43 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL29_CHOCR) HSP 1 Score: 297 bits (761), Expect = 1.660e-97 Identity = 151/282 (53.55%), Postives = 211/282 (74.82%), Query Frame = 0
Query: 2 INEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRT-EDALVLTEFLRTLISPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKR 282
+++E ++K+H REYL RF++KDVRPDGR+LT AR +T SSI TAVGSA+++MG TT +AGV ATLV+P PD+GI++++VELL + ++ R+ E+A+ LTE+LR+LISPHI++SK CVE G LVW + LTVYC+D+DGNLED+++LA VAA+R+V LPSVR+ E+ + + ++ K + E ES +A+ + ERT SLE+D+YPL +SF +F K LIDPS EE VC SR+TF+ RP+G LRG+LKPGG N E LY+SCLT +++R
Sbjct: 1 MDQEVFQKVHPREYLARFLNKDVRPDGRSLTKARRVNITVSSIATAVGSAMLKMGKTTAVAGVHATLVQPAPGAPDQGILDVAVELLPMASPNYKSGRSSEEAICLTEYLRSLISPHINMSKLCVEAGLLVWQLRLTVYCVDNDGNLEDAILLAGVAAMRNVLLPSVRIIGEEVDEGRDAQMVEV-KTENEEGXXXAESIIAVATVERTNSLEIDTYPLPISFILFDGKVLIDPSVAEESVCDSRITFLFRPTGELRGVLKPGGKNVPENLYQSCLTMAKER 281
BLAST of Gvermi5999.t1 vs. uniprot
Match: A9RPF4_PHYPA (Ribosomal RNA-processing protein 43 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RPF4_PHYPA) HSP 1 Score: 155 bits (392), Expect = 1.080e-41 Identity = 107/292 (36.64%), Postives = 166/292 (56.85%), Query Frame = 0
Query: 5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVR-TEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTD-------EQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALIDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGH-NFSEELYKSCLTQSQKRAAE 285
EAY++++ ++ +R +D DVRPDGR LT AR + SI TA GSALV++G+TT+LAGV ++ P A+P++G V + ++ S R R E A V++E L + S ++L + C+ PGK W + VYC+D DG+L D+ +LAAVAAL ++LP+V++T+ + NG + G E D + A++NE + + S +R LE S P+ ++ + L DPSAEEE + +T ++ SG L KPGG + K C+ ++KR AE
Sbjct: 20 EAYKRLYPLQFYERHLDSDVRPDGRPLTRARPTSVNLGSIATADGSALVKIGNTTMLAGVKLEVITPSTASPNQGQVAVDFQMPSICSPLVRPGRPAEAAWVVSEQLSNALVSSNFVNLQQLCIVPGKAAWIAYVDVYCLDADGSLLDAALLAAVAALTHLQLPAVKVTETGRVVPLKNHNG-DAGQEVDSI-------AKKNEDQI-VKSRQR---LERSSMPIALTCVSHRKHLLADPSAEEESILQMSLTVIMDTSGRLISFYKPGGAVAATSATVKDCIELTKKRVAE 299
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A0L0HN85_SPIPD (Ribosomal RNA-processing protein 43 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN85_SPIPD) HSP 1 Score: 151 bits (382), Expect = 2.180e-40 Identity = 93/295 (31.53%), Postives = 160/295 (54.24%), Query Frame = 0
Query: 2 INEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVISG 292
++ E ++KIH EY +RF+ + VRPDGR L+ R K+T +I TA GSA+ R+G TTV+ G+ A + P P G + + +L + + +E + ++E++ ++ S ++LS C+E G+ VW + + C++++GN D+ +LA VAAL+ VRLP+ T E ++AV V +RT L++ P++V+F +F + ++ DP EEE +S++T ++ +G L G+LKPGG +E SCL ++ RA + ++ G
Sbjct: 30 LDSETFKKIHPTEYHRRFLSQGVRPDGRTLSRFRKAKITVGAITTAHGSAMARLGETTVVCGIKAEITEPKTGAPRDGFIVPNFDLPPLCSPQFKPGPPSELSQSISEYINRVLESSKLLNLSDLCIEEGRAVWVLYADIVCLNYEGNAMDAAMLALVAALKHVRLPTA-------------------------TFYEADNAVR-VKEQRTIPLKLSRTPISVTFGVFDGQFILADPDIEEEPHLSSQLTVIIEQNGGLCGMLKPGGSALGQETLTSCLEAARTRATHILGILEG 298
BLAST of Gvermi5999.t1 vs. uniprot
Match: UPI0014589AD7 (exosome complex component RRP43-like n=2 Tax=Pectinidae TaxID=6566 RepID=UPI0014589AD7) HSP 1 Score: 152 bits (383), Expect = 3.130e-40 Identity = 97/281 (34.52%), Postives = 147/281 (52.31%), Query Frame = 0
Query: 14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
EY K+F++KDVRPDGR L R L + TA GSALV++G+TT++ G+ A L P A PD+G + +V+L R +E A VL++F+ +I S +D CV PGKLVW + + C+D+DGN+ D+ +LA +AA R+ RLP V +E V V+ E+T L + S+P++ +F IF ++ L +DP+ EEE + VT V + + KPGG E +C ++ R+ E +R+I
Sbjct: 72 EYYKKFLEKDVRPDGRELGEFRRTVLNIGCVTTAEGSALVKLGNTTIMCGIKAELAAPKPAEPDRGFIVPNVQLTPLCSPHFRPGPPSEQAQVLSQFVAEVIKNSGCVDCKNLCVVPGKLVWVLNCDLMCLDYDGNVFDTAILALLAAFRNTRLPLVEEKEE----------------------------VTEVTMEKTAPLTVSSHPVSCTFSIFDDRILFVDPTVEEEGLATGMVTVVTVGEKICM-VHKPGGSPLKSEQLLTCFDRAFDRSREVLRLI 323
BLAST of Gvermi5999.t1 vs. uniprot
Match: UPI001D090035 (exosome complex component RRP43-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D090035) HSP 1 Score: 150 bits (380), Expect = 3.360e-40 Identity = 96/291 (32.99%), Postives = 154/291 (52.92%), Query Frame = 0
Query: 5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
+ Y+ I+ +Y K ++ ++RPDGR T R L SI+TA GSA+V++G+TTV+ G+ A L +P PDKG + +V+L S S R ++ A V + + +I + IDL K C+ P +L W + + C+D+DG + D+ V+A V+AL+ V+LP V +E V V E E LE+ + P+ +F IF ++ LI DP+AEEE +C +T V+ V R + KPGG S ++C+ +++K+A V +I+
Sbjct: 3 KQYKAINPVKYYKDYLSNNIRPDGRNFTKFRSIALNVDSISTADGSAIVKLGNTTVVCGIKAELCKPKAEEPDKGFLVPNVDLSPLSSSRFRPGPPSDQAQVFSRLVADIIIDTECIDLKKLCIHPDQLAWVLYCDIICLDYDGGVVDAAVIALVSALKTVKLPKVDFDEELFT-------------------------VKCVDVENKELLEVHAVPVANTFVIFDDEQLIVDPTAEEEDLCNGSITVVIVDDHV-RSVHKPGGVPISNINIEACIAETKKQAKYVVNLIN 267
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A7M5X903_9CNID (Ribosomal RNA-processing protein 43 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X903_9CNID) HSP 1 Score: 150 bits (378), Expect = 4.420e-40 Identity = 96/283 (33.92%), Postives = 149/283 (52.65%), Query Frame = 0
Query: 14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVR--TEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKALI-DPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
E+ K F+ ++VRPDGR L R L SINTA GSALVR+G T V+ G++A L P PDKG +V+L SCS ++DA +L++F+ + S + L C+ KL W I + CI HDGNL+D+++ A AALR+ +LP+V +E A+ +Q V ++ L + + P++ +F +F ++ L+ DP+ EEE++ +T V+ G L + KPGG EE K C+ + KR AE + +++
Sbjct: 12 EFYKHFLKENVRPDGRELLKFRDALLNIGSINTARGSALVRLGHTMVICGISAELAEPKATTPDKGFFVPNVDL-PPSCSNKYRPGPPSDDAQILSQFVLDVATNSEVLKLENLCIATKKLAWVIYADIQCISHDGNLKDAIIAALYAALRNTKLPTVEYNEETAD------------VQ--------------VKQDQLFQLPIQTCPVSSTFALFQDEILLADPTNEEEEISNGTITIVVNSEGKLCMVSKPGGAEMKEEKLKVCIRTALKRHAEVLSLVT 267
BLAST of Gvermi5999.t1 vs. uniprot
Match: A0A8B8DAH1_CRAVI (Ribosomal RNA-processing protein 43 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DAH1_CRAVI) HSP 1 Score: 149 bits (377), Expect = 5.750e-40 Identity = 95/291 (32.65%), Postives = 157/291 (53.95%), Query Frame = 0
Query: 5 EAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSES--RNVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
+ +R +EY ++F++++VRPDGR L R + ++TA GSALV++G+T V+ G+ A L +P P G + +VEL S CS + E A VL++F+ +I S ID+ K C+ GKLVW + + C+D+DGN+ D+ VL+ +AAL + LP V L +E + FE E+ +LE+ S P++ ++ IF ++ L +DP+AEEE + ++T V + + KPGG +++ C+ Q+ KR+ E +R+I
Sbjct: 3 DDFRTARPKEYFRKFLEQEVRPDGRELGETRTTVINVGCLSTANGSALVKIGNTAVMCGIKAELAKPKTEEPSSGFLVPNVEL-SPMCSPQFRPGLPGEQARVLSQFMLEVIKNSKCIDVQKLCIVSGKLVWTLYCDIVCLDYDGNVTDACVLSLLAALNNTTLPKVTL-NEDTDKFE-------------------------AFPEQPSALELQSNPVSSTYAIFDDEILFVDPTAEEENLATGQLTIVTIQDKLCM-VHKPGGTPLTDQQLSLCIKQAFKRSTEVLRLI 265
BLAST of Gvermi5999.t1 vs. uniprot
Match: R7TKM0_CAPTE (Ribosomal RNA-processing protein 43 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TKM0_CAPTE) HSP 1 Score: 147 bits (372), Expect = 3.420e-39 Identity = 92/281 (32.74%), Postives = 145/281 (51.60%), Query Frame = 0
Query: 14 EYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESRNVRTED-ALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEKAL-IDPSAEEEKVCASRVTFVLRPSGVLRGILKPGGHNFSEELYKSCLTQSQKRAAEYVRVI 290
EY RF+++DVRPDGR L R L SI+TA GSALV++G+T +L G+ A +V + P++GIV+ SV LL S + R+ D A T F+ L+ S +DL C+E GK WN+ + C+D+DGN+ D+ LA +AAL++ LP V + +E S + + L +++ P++ + IF +K L +DP+ EEE + +T V + + KPGG + + C+ +SQ R E +++I
Sbjct: 12 EYYSRFLEQDVRPDGRDLGGIRPTTLNVGSIDTADGSALVKLGNTCILCGIKAEMVASNPETPEQGIVDSSVSLLPMSTPQFRDRPPVDLAPSCTHFIEQLLTCSGCLDLKDLCIEKGKHAWNLHCDLMCLDYDGNVLDACCLALIAALKNTVLPKVTIDEE--------------------------SGTVKLDAKEKHPLSVNAVPVSTTLAIFADKVLFVDPTQEEESLATGFITVVTKDDDHICMTYKPGGSSVQPSQMQDCIKRSQHRRPEVLQLI 266
BLAST of Gvermi5999.t1 vs. uniprot
Match: G4TI07_SERID (Ribosomal RNA-processing protein 43 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TI07_SERID) HSP 1 Score: 147 bits (371), Expect = 5.070e-39 Identity = 99/302 (32.78%), Postives = 154/302 (50.99%), Query Frame = 0
Query: 1 MINEEAYRKIHLREYLKRFIDKDVRPDGRALTTARVFKLTTSSINTAVGSALVRMGSTTVLAGVAATLVRPDHANPDKGIVNISVELLSTSCSESR-NVRTEDALVLTEFLRTLI--SPHIDLSKYCVEPGKLVWNICLTVYCIDHDGNLEDSVVLAAVAALRDVRLPSVRLTDEQANGFENGDENDLMKIQGNETAEENESAVAIVSTERTESLEMDSYPLTVSFQIFCEK-ALIDPSAEEEKVCASRVTFVLRPSGVLR----GI---LKPGGHNFSEELYKSCLTQSQKRAAEYVRVIS 291
M + ++++H R YL+RF+D+ +RPDGR R +LTT SI+TA GSALVR+G TT++ GV A + PD P +G + +VE+ + + + +E+A +++E L +I S + L C+EP K VW I + CI++DGN D+ +LA AL + +LP R D++ + + S L + + P +F IF K L+DP++ EE + S VT VL S + G+ P G + S LY C+ +QKR AE +R +S
Sbjct: 1 MSDISTFQRLHPRAYLQRFLDEHLRPDGRRPLDCRPLELTTGSISTADGSALVRLGETTIVCGVKAEIAEPDLDAPTRGFIVPNVEISAICAARFKPGPPSEEAQIISEQLNQIIAKSKCLPLDSLCIEPRKAVWTIYIDAVCINYDGNALDATLLAMTTALSNTQLPQARYDDDKK--------------------------MVLCSRMNKTPLALKTLPTATTFGIFESKHLLVDPTSFEEPLLESTVTVVLCGSEAISVSQVGLGRETSPSGQS-STSLYTECIELAQKRQAEILRAVS 275 The following BLAST results are available for this feature:
BLAST of Gvermi5999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5999.t1 ID=Gvermi5999.t1|Name=Gvermi5999.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=295bpback to top |