Gvermi5966.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5966.t1
Unique NameGvermi5966.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length182
Homology
BLAST of Gvermi5966.t1 vs. uniprot
Match: A0A2V3J3J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J0_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 9.300e-90
Identity = 147/181 (81.22%), Postives = 168/181 (92.82%), Query Frame = 0
Query:    1 MQVPNLLSMDVRSTCGDMIAALSSLGAIVYLNSCKELRQRVSLFVMMAPISALNSVTFSISSMLIAGTDFSVSDHGALGWMQSDRLLLGLYLGGVVGFLGTVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAVLLYGVLVIADATRQSEVTVVLNEHVTADVRS 181
            MQ+PNL+S+DVRS CGD+IAA SSLGAIV+LN CKELRQR+ LF+MMAPISALNSVTFS++SM I GTDFSV+DHGALGWMQ++RL+LGLYLGGVVGFLGTV CIAALKYLP+VVVGSVQTMMPVVGT+VAV+MG +RLPD+ TTLGGA LLYGVLVIADATRQSEVTVVLN+H+ +D  S
Sbjct:  523 MQIPNLISLDVRSLCGDLIAATSSLGAIVFLNVCKELRQRIPLFLMMAPISALNSVTFSMASMAIGGTDFSVTDHGALGWMQTERLILGLYLGGVVGFLGTVCCIAALKYLPSVVVGSVQTMMPVVGTLVAVMMGTDRLPDVCTTLGGAALLYGVLVIADATRQSEVTVVLNDHIASDSAS 703          
BLAST of Gvermi5966.t1 vs. uniprot
Match: A0A2D9NF18_9EURY (EamA domain-containing protein n=4 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A2D9NF18_9EURY)

HSP 1 Score: 79.0 bits (193), Expect = 3.550e-14
Identity = 46/154 (29.87%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   16 GDMIAALSSLGAIVYLNSCKELRQRVSLFVMMAPISALNSVTFSISSMLIAGTDFS-VSDHGALGWMQSDRLLLGLYLGGVVGFLGTVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAVLLYGVLVIADATRQSEVT 168
            GD+ A   ++  + YL + +ELR  + LF+   P++ + ++  +ISSMLI  +D++ +      GW+    +    YL    G +G       LK+LP +V+     + P++GT + ++MG  + PD+WT +GG+++L G+ ++  A  Q E T
Sbjct:  159 GDLAAFGGAVAIVGYLMAGRELRSWMPLFLYAFPVTTIAAILLTISSMLIESSDWNQLRSISTFGWVDMIWIPAIGYLAIGPGLIGHTGINGVLKWLPPIVISVSVLIEPILGTFIGIIMGTAQYPDIWTLIGGSIILLGLYLVISAENQLEST 312          
BLAST of Gvermi5966.t1 vs. uniprot
Match: A0A2E1I8Z7_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E1I8Z7_9EURY)

HSP 1 Score: 72.4 bits (176), Expect = 7.520e-12
Identity = 40/155 (25.81%), Postives = 85/155 (54.84%), Query Frame = 0
Query:   16 GDMIAALSSLGAIVYLNSCKELRQRVSLFVMMAPISALNSVTFSISSMLIAGTDFSV--SDHGALGWMQSDRLLLGLYLGGVVGFLGTVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAVLLYGV-LVIADATRQSEV 167
            GD+ A L +   + Y  + ++LRQ + LF  + P++ + ++  ++ S+++  +  S+  S+H   GW+    L   LYL    G +G       L++ P ++V       P++G+I+   +G   +P++WT +GG +LL G+ +V+ +++ + E+
Sbjct:  160 GDLAAVLGAFAVVGYFLAGRKLRQWMPLFTYIFPVTLIAAIQLALISIILEDSTLSLVNSNHSIFGWISITWLPYVLYLALFPGIVGHAGISMVLRWFPPIIVSVAYLFEPLIGSIIGWYLGTTDIPEIWTWIGGIILLIGMGIVVTNSSEEREI 314          
BLAST of Gvermi5966.t1 vs. uniprot
Match: A0A2E8RDN3_9EURY (EamA domain-containing protein n=3 Tax=Archaea TaxID=2157 RepID=A0A2E8RDN3_9EURY)

HSP 1 Score: 70.5 bits (171), Expect = 3.620e-11
Identity = 41/152 (26.97%), Postives = 83/152 (54.61%), Query Frame = 0
Query:   16 GDMIAALSSLGAIVYLNSCKELRQRVSLFVMMAPISALNSVTFSISSMLIAGTDFSVSDH-GALGWMQSDRLLLGLYLGGVVGFLGTVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAVLLYGVLVIADATRQSE 166
            GD +A L ++  + YL   + +R  + LF+   P++ ++++  S  ++L  G  F++ D  GA GW+    +L   YL    G LG     A L+++P + +  +  M PV+G+I+  ++G + +P +WT +GG +++ G+ ++   +   E
Sbjct:  158 GDFLAFLGAVTVVGYLAIGRMVRGWMPLFLYAFPVTLVSAIALSAWAILSEGLTFNLDDMTGAFGWISVTWILYVGYLALGPGLLGHTGINAVLRWIPPLTISMMLIMEPVIGSIIGWIVGVDSIPQIWTLIGGVLMVSGLALVTFDSESEE 309          
BLAST of Gvermi5966.t1 vs. uniprot
Match: A0A519CXC6_9EURY (EamA domain-containing protein n=3 Tax=Archaea TaxID=2157 RepID=A0A519CXC6_9EURY)

HSP 1 Score: 65.9 bits (159), Expect = 1.390e-9
Identity = 47/167 (28.14%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   16 GDMIAALSSLGAIVYLNSCKELR-QRVSLFVMMAPISALNSVTFSISSMLIAGT-DFSVSDH-GALGWMQSDRLLLGLYLGGVVGFLGTVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAVLLYGVLVIADATRQSEVTVVLNEHVTADV 179
            GD+ A   ++  + Y+   ++LR Q + +F+   P++A+ ++  +I ++L  G   FS  D  G+ GW     LL  ++L  V G +G  S  A+L++LP +++     M P +G ++   +G E++PD+WT +GG +++ G  +++ +  Q       NE  +A V
Sbjct:  115 GDLAAFAGAVFVVGYMVISRKLRTQGMPIFLYSFPVTAIGALLLTILAVLYEGALPFSTLDGIGSFGWFGVS-LLAVIFLALVPGLMGHNSINASLRWLPTILISVTLLMEPFLGGLIGWFIGVEQMPDMWTWIGGPIMIIGTALVSISVGQQN-----NEIASAQV 275          
The following BLAST results are available for this feature:
BLAST of Gvermi5966.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J3J0_9FLOR9.300e-9081.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2D9NF18_9EURY3.550e-1429.87EamA domain-containing protein n=4 Tax=unclassifie... [more]
A0A2E1I8Z7_9EURY7.520e-1225.81Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]
A0A2E8RDN3_9EURY3.620e-1126.97EamA domain-containing protein n=3 Tax=Archaea Tax... [more]
A0A519CXC6_9EURY1.390e-928.14EamA domain-containing protein n=3 Tax=Archaea Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..66
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 77..159
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 15..32
NoneNo IPR availableTMHMMTMhelixcoord: 142..159
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:1537175..1537720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5966.t1Gvermi5966.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 1537175..1537720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5966.t1 ID=Gvermi5966.t1|Name=Gvermi5966.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=182bp
MQVPNLLSMDVRSTCGDMIAALSSLGAIVYLNSCKELRQRVSLFVMMAPI
SALNSVTFSISSMLIAGTDFSVSDHGALGWMQSDRLLLGLYLGGVVGFLG
TVSCIAALKYLPNVVVGSVQTMMPVVGTIVAVLMGAERLPDLWTTLGGAV
LLYGVLVIADATRQSEVTVVLNEHVTADVRS*
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