Gvermi5865.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5865.t1
Unique NameGvermi5865.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length211
Homology
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A2V3IRM9_9FLOR (DeSI-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRM9_9FLOR)

HSP 1 Score: 357 bits (915), Expect = 1.400e-123
Identity = 175/210 (83.33%), Postives = 188/210 (89.52%), Query Frame = 0
Query:    1 MLRSDNLSSLPLPPGPGVPVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTAERAREEQQLRQLMEGALTDDDDDYEHQNRPDPDHDQ 210
            M  S  +  +PLPPGPGVPVELNVYDLQHP++PD VSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHP AHTGVF TPPKKAPDARFRQTLLIGFTRL+ D V ELV AMS +W+GNTYNLLTRNCNHFASDLCERLTGK+APEWVNR AWLGEKAKFLLPKGFDTPTAAPVTAERARE QQL +LMEG LTD+D+ Y+ +N  DPDHDQ
Sbjct:    1 MSPSTTVPHIPLPPGPGVPVELNVYDLQHPDNPDAVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPSAHTGVFTTPPKKAPDARFRQTLLIGFTRLSPDDVAELVQAMSVIWVGNTYNLLTRNCNHFASDLCERLTGKAAPEWVNRAAWLGEKAKFLLPKGFDTPTAAPVTAERARE-QQLTELMEGPLTDEDE-YQSENHTDPDHDQ 208          
BLAST of Gvermi5865.t1 vs. uniprot
Match: UPI001E1D3C40 (deubiquitinase DESI2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3C40)

HSP 1 Score: 191 bits (486), Expect = 4.720e-58
Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 0
Query:   17 GVPVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTAERAREE 180
            G+PV LNVYD+ +P  P  +  +N ++   G+G++HSGV + G E+ +GGHP   TGVF   P+ APDA+FRQ + +G   L    + +L+   S+ W GN YNLLTRNCNHFA +LC+ LTG S P W+NR+AW+GEKAKFLLP GFDTP AAPVTA  A  E
Sbjct:    7 GLPVILNVYDIANPTDPALIPNINSWMIIGGMGVFHSGVELLGREFCFGGHPTDATGVFEVTPRCAPDAKFRQAIPMGLCYLDPQSLDQLISNFSAHWTGNRYNLLTRNCNHFAGELCQALTGNSPPAWINRLAWVGEKAKFLLPAGFDTPMAAPVTAAAAERE 170          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A7S0ZGJ5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGJ5_9RHOD)

HSP 1 Score: 169 bits (428), Expect = 9.220e-50
Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 0
Query:   20 VELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAA 170
            V LNVYDL+ PE P  V   N YLY  G+GLYHSGV V+G EYA+GG   + TGVF+  P+ AP A FR++LL+G+T +   QV  L+  +++ + GN+YNLL RNCNHFA +L   LTG  AP W+NRMAWLG + K +LP+GFD P  A
Sbjct:    6 VYLNVYDLKIPEDPTAVGRWNSYLYWGGLGLYHSGVQVHGKEYAFGGSACSETGVFSVRPRNAPAAVFRESLLVGYTEMPAAQVDSLLLDLAAAYPGNSYNLLQRNCNHFADELSVLLTGNHAPYWINRMAWLGSQLKCVLPEGFDDPFGA 156          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A5J4Z2M6_PORPP (DeSI-like protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2M6_PORPP)

HSP 1 Score: 171 bits (432), Expect = 1.120e-49
Identity = 80/160 (50.00%), Postives = 111/160 (69.38%), Query Frame = 0
Query:   20 VELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAA--PVTAERA 177
            V +NVYDL+ P+ PD ++  N +LY  G+GL+HSGV V+  EYA+GGH    TG+F T P+ AP+A FR +  +G+T +  D +  ++DA++  + G +YNLL RNCNHFA +LC  LTG+ AP W+NRMAWLG + + +LP+GFD P AA  P  AE A
Sbjct:   66 VHINVYDLRMPQDPDAITRWNSWLYWGGLGLFHSGVQVHDKEYAFGGHMYDTTGIFTTAPRDAPEAVFRSSHFMGYTSVDEDTLAGMIDALNETYKGISYNLLRRNCNHFADELCFLLTGRHAPAWINRMAWLGTQVQCVLPEGFDNPVAAITPSAAEEA 225          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A1X6NLA1_PORUM (PPPDE domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLA1_PORUM)

HSP 1 Score: 168 bits (426), Expect = 7.960e-49
Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 0
Query:    2 LRSDNLSSLPLPPGPGV--PVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTAERAR 178
            +R   +  +PLPP P     V LNVY+L  P  P ++ T    L + G+GL+HSGV V   EYA+GGH    TGVF   P++AP A FR+++ +G    +  +V+E+V A+   W G  YNLL+RNCNHFA  LC RLTG  AP WVNR+A +GE  K+ LP+GFDTP AAPV  +  R
Sbjct:   47 VRGGRVVPVPLPPSPATRPTVYLNVYNLTMPSPPPSLVTFTSMLASTGLGLHHSGVQVGTTEYAFGGHCEGGTGVFEVRPRRAPGAEFRESIELGACVYSAAEVKEIVRALGVAWPGAGYNLLSRNCNHFADQLCRRLTGVGAPPWVNRLAGVGEAFKWALPEGFDTPMAAPVVPDEMR 225          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A7S1T7Z9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7Z9_9RHOD)

HSP 1 Score: 164 bits (415), Expect = 8.490e-48
Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0
Query:   19 PVELNVYDLQ-HPESPDTVSTLNGYLYTF--GVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPV 172
            PV LNVY+L   PE       L G +     G+G+YHSGV VYG+EYA+GGH    TGVF   P++APDA+FR+++ +G T  T ++V  L++ +S  + G +YNLL RNCNHFA+DLC RLTG  AP W+NR+AW+G K +  LP+GFD+P AAPV
Sbjct:   10 PVHLNVYELSLEPEE-----GLMGKVVWLVEGLGVYHSGVEVYGMEYAFGGHQEDSTGVFTVEPRQAPDAKFRESISVGTTDRTPEEVTHLIELLSEEYKGPSYNLLDRNCNHFANDLCFRLTGAYAPGWINRLAWIGSKLRCFLPEGFDSPAAAPV 161          
BLAST of Gvermi5865.t1 vs. uniprot
Match: M2VTG0_GALSU (PPPDE domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTG0_GALSU)

HSP 1 Score: 164 bits (414), Expect = 7.810e-47
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 0
Query:   19 PVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTAER 176
            PV LNVYDL  PE+P+  + +N YL   GVG YHSGV VYGVE+ +GG     TGVF+  P++A  A +RQ++ +G T L+ ++V  +V  ++  + GNT++LL RNCNHF+  LC  LTGK AP+W+NR+  +G K K+LLPK  D P+A+P+ A++
Sbjct:   65 PVYLNVYDLIDPENPERFTAMNAYLRKIGVGFYHSGVEVYGVEFCFGGSESCDTGVFHVEPRRAQGASYRQSIYMGNTPLSPNEVFLVVQILADSFRGNTFSLLRRNCNHFSDLLCLYLTGKRAPKWINRLCSIGMKVKWLLPKSLDNPSASPLPADK 222          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A7S0T6M0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6M0_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 5.300e-45
Identity = 81/157 (51.59%), Postives = 104/157 (66.24%), Query Frame = 0
Query:   20 VELNVYDLQ-HPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDA-MSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTA 174
            V LN+YDL+   + P  +S  N YLY  G+GLYHSGV VY  EYA+GG     TGVF   P+ AP A+FRQ + +G+T L  D + E V   +++ + GN+YNLL RNCNHFA  LC+ LTG++AP WVNR+AWLG + K +LP GFD P  A   A
Sbjct:   43 VYLNIYDLETQSDDPQAISRWNSYLYYTGLGLYHSGVEVYDKEYAFGGSALPSTGVFVVEPRNAPCAKFRQQVFMGYTELAPDALHEFVMGDVAAGFAGNSYNLLKRNCNHFADALCQMLTGRAAPVWVNRLAWLGTQMKCVLPTGFDDPFGAAADA 199          
BLAST of Gvermi5865.t1 vs. uniprot
Match: R7QHA1_CHOCR (PPPDE domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHA1_CHOCR)

HSP 1 Score: 151 bits (381), Expect = 9.670e-44
Identity = 71/108 (65.74%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   17 GVPVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTR 124
            G PVELNVYDLQHP++PD V T+N YLY  G+GLYHSGV +YG EY YGGH    TGVF   P+KAPDA+FRQT+ +G T L   QV ELV AM+ VW GN+YNLLTR
Sbjct:    6 GAPVELNVYDLQHPDNPDAVPTINWYLYGVGMGLYHSGVSIYGTEYCYGGHADDDTGVFEVVPRKAPDAKFRQTVFVGRTSLNPQQVSELVKAMAHVWSGNSYNLLTR 113          
BLAST of Gvermi5865.t1 vs. uniprot
Match: A0A0A0LPQ8_CUCSA (PPPDE domain-containing protein n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0LPQ8_CUCSA)

HSP 1 Score: 155 bits (391), Expect = 1.140e-43
Identity = 76/167 (45.51%), Postives = 109/167 (65.27%), Query Frame = 0
Query:   18 VPVELNVYDLQHPESPDTVSTLNGYLYTFGVGLYHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTTDQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMAWLGEKAKFLLPKGFDTPTAAPVTAERAREEQQLR 184
            VPV LNVYDL         + +NGY Y  G+G+YHSGV V+GVEYA+G H  A TG+F   PK  P   +R+++LIG T L+  +++  ++ ++  + GNTY+L+T+NCNHF +D+C RLTGK  P WVNR+A LG     +LP G +      V A++ RE+++LR
Sbjct:   17 VPVYLNVYDL---------TPINGYAYWLGLGVYHSGVQVHGVEYAFGAHEHASTGIFEVEPKHCPGFTYRKSILIGRTNLSPREIRSFMEKLAEEYSGNTYHLITKNCNHFCNDVCIRLTGKPIPRWVNRLARLGFLCNCVLPVGLNEMKVGEVKADQNREKKKLR 174          
The following BLAST results are available for this feature:
BLAST of Gvermi5865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRM9_9FLOR1.400e-12383.33DeSI-like protein n=1 Tax=Gracilariopsis chorda Ta... [more]
UPI001E1D3C404.720e-5853.66deubiquitinase DESI2-like n=1 Tax=Mercenaria merce... [more]
A0A7S0ZGJ5_9RHOD9.220e-5054.30Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z2M6_PORPP1.120e-4950.00DeSI-like protein n=1 Tax=Porphyridium purpureum T... [more]
A0A1X6NLA1_PORUM7.960e-4948.04PPPDE domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S1T7Z9_9RHOD8.490e-4852.23Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2VTG0_GALSU7.810e-4748.73PPPDE domain-containing protein n=1 Tax=Galdieria ... [more]
A0A7S0T6M0_9RHOD5.300e-4551.59Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
R7QHA1_CHOCR9.670e-4465.74PPPDE domain-containing protein n=1 Tax=Chondrus c... [more]
A0A0A0LPQ8_CUCSA1.140e-4345.51PPPDE domain-containing protein n=4 Tax=Benincasea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008580PPPDE peptidase domainSMARTSM01179DUF862_2acoord: 18..165
e-value: 3.5E-46
score: 169.4
IPR008580PPPDE peptidase domainPFAMPF05903Peptidase_C97coord: 19..154
e-value: 3.4E-37
score: 127.6
IPR008580PPPDE peptidase domainPANTHERPTHR12378DESUMOYLATING ISOPEPTIDASEcoord: 19..182
IPR008580PPPDE peptidase domainPROSITEPS51858PPPDEcoord: 18..164
score: 42.573551
IPR042266PPPDE peptidase domain superfamilyGENE3D3.90.1720.30PPPDE domainscoord: 16..170
e-value: 5.9E-44
score: 151.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..210
NoneNo IPR availablePANTHERPTHR12378:SF10IP06716P-RELATEDcoord: 19..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:430303..430935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5865.t1Gvermi5865.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 430303..430935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5865.t1 ID=Gvermi5865.t1|Name=Gvermi5865.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=211bp
MLRSDNLSSLPLPPGPGVPVELNVYDLQHPESPDTVSTLNGYLYTFGVGL
YHSGVCVYGVEYAYGGHPGAHTGVFNTPPKKAPDARFRQTLLIGFTRLTT
DQVQELVDAMSSVWLGNTYNLLTRNCNHFASDLCERLTGKSAPEWVNRMA
WLGEKAKFLLPKGFDTPTAAPVTAERAREEQQLRQLMEGALTDDDDDYEH
QNRPDPDHDQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008580PPPDE_dom
IPR042266PPPDE_sf