Gvermi5763.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5763.t1
Unique NameGvermi5763.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length97
Homology
The following BLAST results are available for this feature:
BLAST of Gvermi5763.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 37..62
e-value: 0.018
score: 24.2
coord: 73..96
e-value: 0.3
score: 20.2
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 38..62
e-value: 0.011
score: 16.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 75..96
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 39..62
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 37..67
score: 9.452469
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 73..96
score: 9.306988
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 74..96
e-value: 4.4E-4
score: 20.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 8..96
e-value: 1.4E-10
score: 43.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1527267..1527709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5763.t1Gvermi5763.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1527267..1527709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5763.t1 ID=Gvermi5763.t1|Name=Gvermi5763.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=97bp
MSPRALRRDDHIRISANTKSMSAQGSGSQNRNTDEQIVCPVSGCAKSFKS
NQSYSRHRNAIHRGGSGTEKGNISCPHCVNTFDTPSGLSNHVKKNH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type