Gvermi5672.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A2V3IX65_9FLOR (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX65_9FLOR) HSP 1 Score: 188 bits (478), Expect = 6.490e-60 Identity = 108/118 (91.53%), Postives = 114/118 (96.61%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQSSGRIGKGXXXXXXXXXXXSRR 118
MKLVSFLVKLRSETV+VELKNG+TAHGTVTGVDHSMN+HLK VTL VRGRNP KLQALS+RGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDR ++GRIGKGXXXXXXXXXXXSRR
Sbjct: 1 MKLVSFLVKLRSETVSVELKNGTTAHGTVTGVDHSMNIHLKGVTLDVRGRNPVKLQALSVRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRPAAGRIGKGXXXXXXXXXXXSRR 118
BLAST of Gvermi5672.t1 vs. uniprot
Match: R7QN78_CHOCR (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN78_CHOCR) HSP 1 Score: 173 bits (438), Expect = 9.490e-54 Identity = 89/107 (83.18%), Postives = 96/107 (89.72%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQ---SSGRIGKG 104
MKLV FLVKLRSETVTVELKNG+ AHGTV GVDHSMN+HLK V L +RGRNP KLQALSIRGSTVRYV+LPDSLALD+LLVDDGLRPRRTTNPDR +SGRIG+G
Sbjct: 1 MKLVRFLVKLRSETVTVELKNGTVAHGTVVGVDHSMNIHLKGVKLELRGRNPTKLQALSIRGSTVRYVLLPDSLALDSLLVDDGLRPRRTTNPDRAPGVASGRIGRG 107
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A7S3ECE2_9RHOD (Small nuclear ribonucleoprotein Sm D1 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECE2_9RHOD) HSP 1 Score: 132 bits (332), Expect = 9.910e-38 Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQSSGR 100
MKLV FL KLRSETVT+ELKNG+ HGTVTGVDH+MNVHL +V + +RG+NP+ L +LS+RGS++RYVILPDSL +DALLVDD +R R ++GR
Sbjct: 1 MKLVRFLTKLRSETVTIELKNGTVIHGTVTGVDHAMNVHLSTVKMTLRGKNPSTLDSLSVRGSSIRYVILPDSLNIDALLVDDSIRQRGVPGKPEAAAGR 100
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A1X6NTQ2_PORUM (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTQ2_PORUM) HSP 1 Score: 124 bits (312), Expect = 2.290e-34 Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQSS 98
MKLV+FL+KLR+E VTVELKNGS A GTV+ VDH+MN+HL V L RG +P L +L +RG++VRYV+LPDSL+LDALLVDDGLRP +T P R S
Sbjct: 1 MKLVTFLMKLRNEPVTVELKNGSCAAGTVSSVDHAMNIHLTGVRLTARGGSPIALGSLCVRGASVRYVLLPDSLSLDALLVDDGLRPPPSTPPTRSWS 98
BLAST of Gvermi5672.t1 vs. uniprot
Match: M2XXL6_GALSU (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXL6_GALSU) HSP 1 Score: 119 bits (298), Expect = 1.860e-32 Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPR 88
MKL FL+KL SETVTVELKNG+ GTVTGVDH+MN LK+V + RG+NP L A+S+RGST+RY ILP+SL +D+LLVDD +RPR
Sbjct: 1 MKLTRFLMKLNSETVTVELKNGTVVQGTVTGVDHNMNTTLKAVKMTPRGKNPVTLDAMSLRGSTIRYFILPESLNVDSLLVDDSIRPR 88
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A6G0SID1_9STRA (Small nuclear ribonucleoprotein Sm D1 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SID1_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.710e-32 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTT 91
MKLV FL+KL +ETVT+ELKNG+ HGT+TGVD SMN HLK+V + V+G+NP L +LSIRG+ +RY ILPDSL LD LL+DD R + +T
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKAVKMTVKGKNPVNLDSLSIRGNNIRYYILPDSLNLDTLLIDDTPREKHST 91
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A3G2SCJ1_9BASI (Small nuclear ribonucleoprotein Sm D1 n=6 Tax=Malassezia TaxID=55193 RepID=A0A3G2SCJ1_9BASI) HSP 1 Score: 117 bits (294), Expect = 5.940e-32 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQSSGRIGKG 104
MKLV FL+KL +E+VT+ELKNG+ HGTVTGVD MN HLK+V + VRG P L LSIRG+ RY ILPD+L LD LLVDD RP+ D + GR +G
Sbjct: 1 MKLVRFLMKLNNESVTIELKNGTVVHGTVTGVDVQMNTHLKAVKMTVRGGEPMSLDTLSIRGNNTRYWILPDALPLDTLLVDDAPRPKGKRRDDASARGRADRG 104
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A5J4YYK7_PORPP (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYK7_PORPP) HSP 1 Score: 117 bits (294), Expect = 7.970e-32 Identity = 57/88 (64.77%), Postives = 72/88 (81.82%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPR 88
MKLV FL+KL+SETVTVELKNG+ HGTV VD+SMN+H++ V + +G+NP + +S+RGSTVRYVILPDSL LDALL+D +RPR
Sbjct: 1 MKLVRFLMKLKSETVTVELKNGTKVHGTVILVDYSMNIHMRGVKMTYKGQNPVHVDFMSVRGSTVRYVILPDSLNLDALLIDYSMRPR 88
BLAST of Gvermi5672.t1 vs. uniprot
Match: K3WSY3_GLOUD (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY3_GLOUD) HSP 1 Score: 118 bits (295), Expect = 7.980e-32 Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDGLRPRRTTNPDRQSSGRIGKG 104
MKLV FL+KL +ETVT+ELKNG+ HGT+TGVD SMN HLKSV + V+G+NP L +LSIRG+ +RY ILPDSL LD LL++D PR ++G G+G
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKSVKMTVKGKNPVSLDSLSIRGNNIRYYILPDSLNLDTLLIED--TPREKVKAGAPAAGGRGRG 102
BLAST of Gvermi5672.t1 vs. uniprot
Match: A0A7J6PIK9_PEROL (Small nuclear ribonucleoprotein Sm D1 n=4 Tax=Alveolata TaxID=33630 RepID=A0A7J6PIK9_PEROL) HSP 1 Score: 117 bits (293), Expect = 8.430e-32 Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0
Query: 1 MKLVSFLVKLRSETVTVELKNGSTAHGTVTGVDHSMNVHLKSVTLHVRGRNPAKLQALSIRGSTVRYVILPDSLALDALLVDDG 84
MKLV FL KL SETVTVELKNG+ HGTVTGVD SMN H+K+V + VRGRNP + L+IRGST+RY ILPD + LD LL+DDG
Sbjct: 1 MKLVRFLQKLNSETVTVELKNGTVVHGTVTGVDVSMNTHMKNVKVTVRGRNPVGMDHLTIRGSTIRYFILPDHIPLDTLLIDDG 84 The following BLAST results are available for this feature:
BLAST of Gvermi5672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5672.t1 ID=Gvermi5672.t1|Name=Gvermi5672.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=119bpback to top |