Gvermi5561.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5561.t1 vs. uniprot
Match: A0A2V3IY64_9FLOR (Sm protein F n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY64_9FLOR) HSP 1 Score: 152 bits (385), Expect = 8.170e-46 Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0
Query: 38 MATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIRPGLAAS 119
M +K TH+NP PFL SL GKPVIVKLKWGMEYRG+LKSVD YMNIQLEN+EEWVDGAMDG LGEILIRCNNVLYIRPGLAAS
Sbjct: 1 MTSKQTHVNPTPFLHSLIGKPVIVKLKWGMEYRGFLKSVDKYMNIQLENSEEWVDGAMDGHLGEILIRCNNVLYIRPGLAAS 82
BLAST of Gvermi5561.t1 vs. uniprot
Match: R7QKP6_CHOCR (Sm protein F n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKP6_CHOCR) HSP 1 Score: 146 bits (369), Expect = 2.100e-43 Identity = 68/88 (77.27%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 38 MATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIRPGLAASAASADD 125
M++KS+ I+PKPFL SLTGKPVIVKLKWG+EYRG+L SVDNYMN+QLEN+EEW+DGAM +LGEILIRCNNVLYIRPGLAA+A+ D
Sbjct: 1 MSSKSSVIHPKPFLASLTGKPVIVKLKWGLEYRGHLTSVDNYMNLQLENSEEWIDGAMADKLGEILIRCNNVLYIRPGLAATASEPAD 88
BLAST of Gvermi5561.t1 vs. uniprot
Match: UPI000521808D (small nuclear ribonucleoprotein F n=2 Tax=Archelosauria TaxID=1329799 RepID=UPI000521808D) HSP 1 Score: 127 bits (318), Expect = 1.950e-35 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 0
Query: 37 SMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
S TKS +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 20 SAKTKSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 96
BLAST of Gvermi5561.t1 vs. uniprot
Match: UPI0013F29DD5 (small nuclear ribonucleoprotein F-like n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=UPI0013F29DD5) HSP 1 Score: 126 bits (316), Expect = 4.430e-35 Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 0
Query: 26 ATRPGFPFPGVSMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
A RP P V+ A +S +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 14 APRPD-PAVVVTCAPQSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 100
BLAST of Gvermi5561.t1 vs. uniprot
Match: G3WG39_SARHA (Sm protein F n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WG39_SARHA) HSP 1 Score: 127 bits (319), Expect = 5.400e-35 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0
Query: 35 GVSMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
G TKS +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 64 GAVSTTKSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 142
BLAST of Gvermi5561.t1 vs. uniprot
Match: A0A811PTF8_9POAL (Sm protein F n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811PTF8_9POAL) HSP 1 Score: 126 bits (316), Expect = 6.940e-35 Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0
Query: 35 GVSMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIRPGLAASAASADDE 126
G + A K+ +NPKPFL +LTGKPVIVKLKWGMEY+GYL SVD+YMN+QL NTEE++DG G LGEILIRCNNVLY+R G+ A D E
Sbjct: 38 GRATAGKTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGEILIRCNNVLYLR-GVPEDAEIEDAE 128
BLAST of Gvermi5561.t1 vs. uniprot
Match: A0A8B9C1D5_9AVES (Sm protein F n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9C1D5_9AVES) HSP 1 Score: 127 bits (320), Expect = 9.270e-35 Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0
Query: 6 WPRVRFVDHIAAKLVYALKGATRPGFPFPGVSMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
W R R +L ++ + RP P + S +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 72 WKRPR------RRLPFSRRSRVRPALLGPRRAPVAMSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 173
BLAST of Gvermi5561.t1 vs. uniprot
Match: UPI00193AA6C8 (small nuclear ribonucleoprotein F-like n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193AA6C8) HSP 1 Score: 124 bits (310), Expect = 1.680e-34 Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 0
Query: 45 INPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
+NPKPF+ SLTGKPVIVKLKWGMEY+GYL SVD YMN+QL NTEE+VDGA+ G LGEILIRCNNVLYIR
Sbjct: 6 MNPKPFINSLTGKPVIVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALSGHLGEILIRCNNVLYIR 74
BLAST of Gvermi5561.t1 vs. uniprot
Match: UPI000549CEA6 (small nuclear ribonucleoprotein F n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI000549CEA6) HSP 1 Score: 125 bits (314), Expect = 2.050e-34 Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0
Query: 30 GFPFPGVSMATKSTHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
G P +++ +S +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGA+ G LGE+LIRCNNVLYIR
Sbjct: 45 GLRKPQPALSPQSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIR 128
BLAST of Gvermi5561.t1 vs. uniprot
Match: G1KPF7_ANOCA (Sm protein F n=16 Tax=Euteleostomi TaxID=117571 RepID=G1KPF7_ANOCA) HSP 1 Score: 123 bits (309), Expect = 2.240e-34 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
Query: 42 STHINPKPFLLSLTGKPVIVKLKWGMEYRGYLKSVDNYMNIQLENTEEWVDGAMDGELGEILIRCNNVLYIR 113
S +NPKPFL LTGKPV+VKLKWGMEY+GYL SVD YMN+QL NTEE++DGAM G LGE+LIRCNNVLYIR
Sbjct: 1 SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGAMSGHLGEVLIRCNNVLYIR 72 The following BLAST results are available for this feature:
BLAST of Gvermi5561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5561.t1 ID=Gvermi5561.t1|Name=Gvermi5561.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=133bpback to top |