Gvermi5543.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5543.t1 vs. uniprot
Match: A0A2V3IJR3_9FLOR (U1-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJR3_9FLOR) HSP 1 Score: 181 bits (460), Expect = 3.250e-54 Identity = 114/224 (50.89%), Postives = 159/224 (70.98%), Query Frame = 0
Query: 1 MSPKTKQSRREQTQHLCKICNIWIADNKPQRDQHEAGAKHIANRQRVLREIAEQNEKKRAQERREGKRIPSQNQSRAMQQMMELAMQATQGEVKEVESTEDGKQETVIAAQQVDENGYPLPADSVFQWTTVAEEDGGTFQDGEGEEHTD----KLEQSETHRERAIGTLVSEKFKAGVKRV----QEIDETRDLVAEDAKERSLALAAFTKRKAAAGRKRRRKQ 216
M+PK KQ R+E TQHLC+ICNIWIADNK QRDQHE+GAKHIANRQ++LR+IAE+NEK RA+ R+EG+ ++ SRA+Q++ME+A+QATQG++ E E T+ K + + QQVDE GYP A+S+F+W VA+E+ G D G+E +LEQS +E + +++++ AGVKR + ++ EDA+ER+ AL++F KR AAGRKRRRK+
Sbjct: 1 MAPKAKQRRQETTQHLCRICNIWIADNKLQRDQHESGAKHIANRQKLLRQIAEKNEKARAEARKEGR--STEGGSRAVQELMEIALQATQGKILEPEKTDIDKSDVEQSDQQVDEKGYPTAANSLFEWIAVADENDG---DTNGQEXXXXXXGRLEQSA--QEAELHHVITQQV-AGVKRTLGREPVVSSVKEEDKEDAQERTDALSSFKKRPPAAGRKRRRKR 216
BLAST of Gvermi5543.t1 vs. uniprot
Match: R7QPY9_CHOCR (zf-U1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPY9_CHOCR) HSP 1 Score: 70.1 bits (170), Expect = 5.110e-11 Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 0
Query: 3 PKTKQSRREQTQHLCKICNIWIADNKPQRDQHEAGAKHIANRQRVLREIAEQNEKKRAQERRE-----GKRIPSQ---NQSRAMQQMMELAMQATQ-----------------GEVKEVESTEDGKQETVIAAQQVDENGYPLPADSVF-QWTTV 131
PK + R+ LCKICNIWIADNK QR QHE +KH R +L+ IA++NE+K +++R+ GK P+ N + QQ++E A+ G ++++ ++ + + +DENG+PLPA +++ QW +
Sbjct: 2 PKKPYANRK----LCKICNIWIADNKIQRLQHEEASKHKQARAALLKSIADKNERKAKEQKRDAALAAGKTAPATGGTNAATVTQQLLEKVASASSRRAASEKSRKRPRDDSHGASSDIKTDARSQENGQLQDEALDENGFPLPASAMYGQWQSA 152 The following BLAST results are available for this feature:
BLAST of Gvermi5543.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5543.t1 ID=Gvermi5543.t1|Name=Gvermi5543.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=217bpback to top |