Gvermi5278.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5278.t1 vs. uniprot
Match: R7Q8B2_CHOCR (RT_RNaseH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8B2_CHOCR) HSP 1 Score: 78.6 bits (192), Expect = 9.810e-15 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0
Query: 45 NVHLALWNFQIPKDAIWIEECTRYVPRSGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFFF 128
+V AL P A+W EEC RY+P KW+ L Y+DDVIIYS++V EHF H++ LL DAG++ KL KC FF
Sbjct: 51 DVCAALRVVPFPPHAVWFEECPRYLPAGRRYYTVACKWETALVYLDDVIIYSKTVTEHFAHVREFSGLLPDAGVSLKLSKCAFF 134
BLAST of Gvermi5278.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38) HSP 1 Score: 68.6 bits (166), Expect = 6.010e-11 Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 71 RSGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFFF 128
RS II S+VKWK L Y+DDVI++SR++EEHF H++ V LL+ AG+T K KC FF
Sbjct: 496 RSLDIILSRVKWKSCLVYLDDVIVFSRTIEEHFGHLQEVFSLLERAGITLKFSKCHFF 553
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A821XC55_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821XC55_9BILA) HSP 1 Score: 56.6 bits (135), Expect = 3.670e-8 Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0
Query: 80 VKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
+KW L Y+DD+I+YS S ++H H++LVLQ ++ +GLT K+ KC F
Sbjct: 8 LKWSCALVYLDDIIVYSTSFDDHLYHLELVLQHIQQSGLTLKIDKCHF 55
BLAST of Gvermi5278.t1 vs. uniprot
Match: UPI00142D7D55 (uncharacterized protein LOC117131303 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D7D55) HSP 1 Score: 59.7 bits (143), Expect = 7.440e-8 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
Query: 72 SGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
G+I PS W P+ +IDD++IYSRS EEH H+++VL+ L+D L KL KC F
Sbjct: 448 KGFIRPSSSPWGAPVLFIDDILIYSRSEEEHKEHLRMVLERLRDRKLFAKLSKCRF 503
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A4Y2IJI1_ARAVE (RNA-directed DNA polymerase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2IJI1_ARAVE) HSP 1 Score: 59.7 bits (143), Expect = 7.730e-8 Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 0
Query: 80 VKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
+KWK+ L Y+DDVI+Y+ ++EEH +++VLQ ++ AGLT +KCFF
Sbjct: 56 MKWKHCLCYLDDVIVYAATIEEHLRRLRMVLQCIRSAGLTLNNEKCFF 103
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A816EKY2_9BILA (RNA-directed DNA polymerase n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A816EKY2_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 8.080e-8 Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 47 HLALWNFQIPKDAIWIEECTRYVPRSGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
H L+ F++ + T R ++ +KW L Y+DD+I+YS S E+H H++LVLQ L+++GLT K+ KC F
Sbjct: 852 HAGLFRFRVMPFGLTNAPAT--FQRLMDLVLGGLKWSCALVYLDDIIVYSSSFEDHLNHLELVLQQLQNSGLTLKINKCHF 930
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A818PVW9_9BILA (RNA-directed DNA polymerase n=6 Tax=Rotaria sordida TaxID=392033 RepID=A0A818PVW9_9BILA) HSP 1 Score: 59.7 bits (143), Expect = 8.190e-8 Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 47 HLALWNFQIPKDAIWIEECTRYVPRSGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
H L+ F++ + T R ++ +KW L Y+DD+I+YS S E+H H++LVLQ L+++GLT K+ KC F
Sbjct: 1145 HAGLFRFRVMPFGLTNAPAT--FQRLMDLVLGGLKWSCALVYLDDIIVYSSSFEDHLNHLELVLQQLQNSGLTLKINKCHF 1223
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A821M5X5_9BILA (Hypothetical protein n=2 Tax=Rotaria socialis TaxID=392032 RepID=A0A821M5X5_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 9.350e-8 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 0
Query: 47 HLALWNFQIPKDAIWIEECTRYVPRSGYIIPSKVKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCFF 127
H L+ F++ + T R ++ +KW L Y+DD+I+YS S ++H H++LVLQ ++ +GLT K+ KC F
Sbjct: 25 HAGLFRFRVMPFGLTNAPAT--FQRLMDLVLGGLKWSCALVYLDDIIVYSTSFDDHLYHLELVLQQIQQSGLTLKIDKCHF 103
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A4Y2F7G7_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2F7G7_ARAVE) HSP 1 Score: 56.2 bits (134), Expect = 9.720e-8 Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 80 VKWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKCF 126
+KWK+ L Y+DDVI+Y+ + EEH +++VLQ ++ AGLT +KCF
Sbjct: 56 MKWKHCLCYLDDVIVYAATFEEHLRRLRMVLQCIRSAGLTLNHEKCF 102
BLAST of Gvermi5278.t1 vs. uniprot
Match: A0A820Y3L9_9BILA (Hypothetical protein n=2 Tax=Rotaria socialis TaxID=392032 RepID=A0A820Y3L9_9BILA) HSP 1 Score: 57.4 bits (137), Expect = 1.280e-7 Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query: 81 KWKYPLGYIDDVIIYSRSVEEHFMHMKLVLQLLKDAGLTFKLKKC 125
+WKYPL YIDD+IIYS++ EEH +H+ + +LKDA KC
Sbjct: 86 RWKYPLAYIDDIIIYSKTFEEHLLHLNEICTILKDARFPLNPDKC 130 The following BLAST results are available for this feature:
BLAST of Gvermi5278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5278.t1 ID=Gvermi5278.t1|Name=Gvermi5278.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=129bpback to top |