Gvermi5217.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5217.t1
Unique NameGvermi5217.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length293
Homology
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 8.370e-66
Identity = 137/305 (44.92%), Postives = 187/305 (61.31%), Query Frame = 0
Query:   14 SVLMFHAHAKGGNLDPCRMSSDCATSRTCRVFKLDIGKAILQVF--GKGIDLGN--------IITSITPTCNANDNYCMCLPSSDNAFKCSTSSSCLRGEVCTSERYCISEMQQRWFQEARKC-------ISNSACGS------NQQCAKFVLDAAGFCLARM---GTSNIGNXXXXXXXXXXXXXXNGGQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            S L   A A GGNL PCR  S+CA  R+CR F LD+  +I  +F   +  DL N        I+ SIT +C   D YC+C+P+ ++   CS+ S C  GE C ++  C+++ Q    +E + C       + ++ C        +     F  +  GFCLAR     TS     XXXXXXXXXXXXX      ++CI+   L H+  H+L+Y+ H+TARVLCD++GSCATAGH+VR+RG+AMMMKSYC + G+C+  I  VNSPRY RAL IPS++ D++FTAFAAR+ T  EE++LR AVH+GL
Sbjct:   14 SALAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLS-SISTIFQSAQSEDLENPDSGTVLAILQSITQSCRDED-YCLCVPTDEDLIGCSSDSDCSDGEECLADN-CVADSQLEAAKEPKSCXXXXXXTVPDTICAKLTAGLLDSLAETFGFEDNGFCLARFKESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 3.950e-33
Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 0
Query:  182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            VCI A  L H+  H+L+Y  H+++RVLCD++GSCAT GHIVRY GKAMMMK+YC +   C+ +I+ VNSPRY   + +PS T  + +T+FAAR+ +  EE  + AAV MGL
Sbjct:   44 VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYCRIV-ECEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153          
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 1.550e-32
Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 0
Query:  178 QAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            Q  DVCI+A  L+H+    L+Y  H  ARVLCDS GSCAT GHIV + G  MMM SYC  A SC  KIM VNSPRY RA+ +PS T  + FTAFAAR+ T TEE++L  A+ +GL
Sbjct:  140 QTSDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCE-AVSCVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLS2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLS2_CHOCR)

HSP 1 Score: 124 bits (310), Expect = 8.560e-31
Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 0
Query:  182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            VCI A  L H+    L++ NH+   VLCD YGSCAT GHIV YRG AMMM++YC + G C  + + VNSPRY R L +PS T  + FT+ AAR+ T+ EE +L   VH+GL
Sbjct:  102 VCIDAAALDHVARQDLVFSNHVLKAVLCDMYGSCATDGHIVEYRGHAMMMRTYCDLVG-CSKREVEVNSPRYRRRLRVPSRTEGLEFTSLAARYSTRVEERMLAIVVHIGL 211          
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IFS2_9FLOR (U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS2_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 1.610e-30
Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 0
Query:  182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            VCI AN L+H P + LLY NH  ARVLCD+Y SCAT GH+V Y GK MMM SYC +   C  ++M VNSPRY RAL IPSN+  + FTA AAR+ T  EE ++  A+ +GL
Sbjct:  421 VCIDANALAHFPRNSLLYANHQMARVLCDTYASCATHGHMVYYLGKPMMMSSYCRLT-QCTQQLMYVNSPRYSRALRIPSNSPQLQFTALAARYATDIEENLMSLAIRLGL 530          
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7Q9R8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R8_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 2.250e-29
Identity = 60/116 (51.72%), Postives = 79/116 (68.10%), Query Frame = 0
Query:  177 GQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            G  + VCI AN L H+   +L++++H  ARVLCD YGSCATAGH+V+  GKAMMM ++C   G C  K M VNSP+Y R  +I S T  + +TAFAAR+ ++ EE I+ AAV  GL
Sbjct:  209 GDPESVCIDANALKHVAPRELIFESHRWARVLCDEYGSCATAGHMVKSEGKAMMMGTFCRYVG-CVEKAMMVNSPKYRRGASIRSKTKGLVYTAFAARYQSRVEELIIAAAVRWGL 323          
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR)

HSP 1 Score: 126 bits (317), Expect = 2.450e-29
Identity = 61/112 (54.46%), Postives = 80/112 (71.43%), Query Frame = 0
Query:  181 DVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            ++CI  ++LSH+    L+Y +H  ARVLCD   SCAT GHIV Y+G+AMMM+ YC +   C  KIM VNSPRY RA  + S+T D+SFTAFAAR+ +  EE++LRA V +GL
Sbjct:  441 EICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCTIT-RCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551          
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLH8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLH8_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 2.060e-27
Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 0
Query:  177 GQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            G  ++ CI A  L H+P+  L++K H  +RVLCD   SCAT GH+V + G AM M +YC   G CK  ++ VNSPR+ R + I SNT ++ +T FAARH T+ EE ++R AV +GL
Sbjct:  394 GNDEEACIDARALGHLPSDALVFKKHAVSRVLCDENNSCATRGHMVLFHGHAMRMSTYCDSVG-CKQAVVEVNSPRFSRGMRIESNTKELEYTVFAARHDTRAEESMIRIAVQLGL 508          
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLR2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLR2_CHOCR)

HSP 1 Score: 119 bits (298), Expect = 1.690e-26
Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 0
Query:  181 DVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            ++CI A  LSH+    L++KNH  A VLCD  GSCATAGH+V + G+AM MK+YC +   C  ++M VNSPRY R L + S+T  + F AFAAR+ T+ EE +L  AV  GL
Sbjct:  634 EICIDARALSHLSKKDLVFKNHKWANVLCDDMGSCATAGHMVNFNGRAMRMKTYCILV-KCVERVMQVNSPRYSRGLQVDSSTEGLRFHAFAARYNTRVEEAVLAFAVRAGL 744          
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IWJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWJ3_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 2.020e-24
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 0
Query:  183 CISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
            CI+   L++      +Y++H  ARVLCD+ GSCAT GHI  Y G  MMMKSYC M   C   I  VNSPRY   L + S +  +SFTA AAR+G++ EE +L + V  GL
Sbjct:   56 CIAVEVLNNFERDDFVYESHRLARVLCDASGSCATGGHIFEYEGNVMMMKSYCEMQW-CTEAIRKVNSPRYRVGLRVESRSMALSFTAHAARYGSRIEEIVLTSLVRFGL 164          
The following BLAST results are available for this feature:
BLAST of Gvermi5217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3IDX8_9FLOR8.370e-6644.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4J5_CHOCR3.950e-3353.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IQ05_9FLOR1.550e-3257.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLS2_CHOCR8.560e-3152.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IFS2_9FLOR1.610e-3056.76U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=... [more]
R7Q9R8_CHOCR2.250e-2951.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J1H7_9FLOR2.450e-2954.46Early nodulin-12A n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QLH8_CHOCR2.060e-2747.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLR2_CHOCR1.690e-2650.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IWJ3_9FLOR2.020e-2448.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:626566..627444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5217.t1Gvermi5217.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 626566..627444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5217.t1 ID=Gvermi5217.t1|Name=Gvermi5217.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=293bp
MLATNVFTGITLFSVLMFHAHAKGGNLDPCRMSSDCATSRTCRVFKLDIG
KAILQVFGKGIDLGNIITSITPTCNANDNYCMCLPSSDNAFKCSTSSSCL
RGEVCTSERYCISEMQQRWFQEARKCISNSACGSNQQCAKFVLDAAGFCL
ARMGTSNIGNGTSNPDSNSTNTDGNGGQAQDVCISANYLSHIPAHKLLYK
NHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNS
PRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL*
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