Gvermi5217.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR) HSP 1 Score: 217 bits (553), Expect = 8.370e-66 Identity = 137/305 (44.92%), Postives = 187/305 (61.31%), Query Frame = 0
Query: 14 SVLMFHAHAKGGNLDPCRMSSDCATSRTCRVFKLDIGKAILQVF--GKGIDLGN--------IITSITPTCNANDNYCMCLPSSDNAFKCSTSSSCLRGEVCTSERYCISEMQQRWFQEARKC-------ISNSACGS------NQQCAKFVLDAAGFCLARM---GTSNIGNXXXXXXXXXXXXXXNGGQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
S L A A GGNL PCR S+CA R+CR F LD+ +I +F + DL N I+ SIT +C D YC+C+P+ ++ CS+ S C GE C ++ C+++ Q +E + C + ++ C + F + GFCLAR TS XXXXXXXXXXXXX ++CI+ L H+ H+L+Y+ H+TARVLCD++GSCATAGH+VR+RG+AMMMKSYC + G+C+ I VNSPRY RAL IPS++ D++FTAFAAR+ T EE++LR AVH+GL
Sbjct: 14 SALAVSAFAAGGNLAPCRSDSNCAGERSCRAFALDLS-SISTIFQSAQSEDLENPDSGTVLAILQSITQSCRDED-YCLCVPTDEDLIGCSSDSDCSDGEECLADN-CVADSQLEAAKEPKSCXXXXXXTVPDTICAKLTAGLLDSLAETFGFEDNGFCLARFKESSTSGKPGSXXXXXXXXXXXXXXXXXXSEICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7Q4J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J5_CHOCR) HSP 1 Score: 128 bits (321), Expect = 3.950e-33 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 0
Query: 182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
VCI A L H+ H+L+Y H+++RVLCD++GSCAT GHIVRY GKAMMMK+YC + C+ +I+ VNSPRY + +PS T + +T+FAAR+ + EE + AAV MGL
Sbjct: 44 VCIDAAALQHLQTHELVYSRHVSSRVLCDAFGSCATQGHIVRYAGKAMMMKNYCRIV-ECEERIIKVNSPRYSIGMRVPSKTDGLEYTSFAARYESVVEEAAIAAAVRMGL 153
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR) HSP 1 Score: 129 bits (325), Expect = 1.550e-32 Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 0
Query: 178 QAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
Q DVCI+A L+H+ L+Y H ARVLCDS GSCAT GHIV + G MMM SYC A SC KIM VNSPRY RA+ +PS T + FTAFAAR+ T TEE++L A+ +GL
Sbjct: 140 QTSDVCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCE-AVSCVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLS2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLS2_CHOCR) HSP 1 Score: 124 bits (310), Expect = 8.560e-31 Identity = 58/111 (52.25%), Postives = 74/111 (66.67%), Query Frame = 0
Query: 182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
VCI A L H+ L++ NH+ VLCD YGSCAT GHIV YRG AMMM++YC + G C + + VNSPRY R L +PS T + FT+ AAR+ T+ EE +L VH+GL
Sbjct: 102 VCIDAAALDHVARQDLVFSNHVLKAVLCDMYGSCATDGHIVEYRGHAMMMRTYCDLVG-CSKREVEVNSPRYRRRLRVPSRTEGLEFTSLAARYSTRVEERMLAIVVHIGL 211
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IFS2_9FLOR (U1 small nuclear ribonucleoprotein 70 kDa n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS2_9FLOR) HSP 1 Score: 129 bits (325), Expect = 1.610e-30 Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 0
Query: 182 VCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
VCI AN L+H P + LLY NH ARVLCD+Y SCAT GH+V Y GK MMM SYC + C ++M VNSPRY RAL IPSN+ + FTA AAR+ T EE ++ A+ +GL
Sbjct: 421 VCIDANALAHFPRNSLLYANHQMARVLCDTYASCATHGHMVYYLGKPMMMSSYCRLT-QCTQQLMYVNSPRYSRALRIPSNSPQLQFTALAARYATDIEENLMSLAIRLGL 530
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7Q9R8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R8_CHOCR) HSP 1 Score: 123 bits (308), Expect = 2.250e-29 Identity = 60/116 (51.72%), Postives = 79/116 (68.10%), Query Frame = 0
Query: 177 GQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
G + VCI AN L H+ +L++++H ARVLCD YGSCATAGH+V+ GKAMMM ++C G C K M VNSP+Y R +I S T + +TAFAAR+ ++ EE I+ AAV GL
Sbjct: 209 GDPESVCIDANALKHVAPRELIFESHRWARVLCDEYGSCATAGHMVKSEGKAMMMGTFCRYVG-CVEKAMMVNSPKYRRGASIRSKTKGLVYTAFAARYQSRVEELIIAAAVRWGL 323
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR) HSP 1 Score: 126 bits (317), Expect = 2.450e-29 Identity = 61/112 (54.46%), Postives = 80/112 (71.43%), Query Frame = 0
Query: 181 DVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
++CI ++LSH+ L+Y +H ARVLCD SCAT GHIV Y+G+AMMM+ YC + C KIM VNSPRY RA + S+T D+SFTAFAAR+ + EE++LRA V +GL
Sbjct: 441 EICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCTIT-RCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLH8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLH8_CHOCR) HSP 1 Score: 120 bits (302), Expect = 2.060e-27 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 0
Query: 177 GQAQDVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
G ++ CI A L H+P+ L++K H +RVLCD SCAT GH+V + G AM M +YC G CK ++ VNSPR+ R + I SNT ++ +T FAARH T+ EE ++R AV +GL
Sbjct: 394 GNDEEACIDARALGHLPSDALVFKKHAVSRVLCDENNSCATRGHMVLFHGHAMRMSTYCDSVG-CKQAVVEVNSPRFSRGMRIESNTKELEYTVFAARHDTRAEESMIRIAVQLGL 508
BLAST of Gvermi5217.t1 vs. uniprot
Match: R7QLR2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLR2_CHOCR) HSP 1 Score: 119 bits (298), Expect = 1.690e-26 Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 0
Query: 181 DVCISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
++CI A LSH+ L++KNH A VLCD GSCATAGH+V + G+AM MK+YC + C ++M VNSPRY R L + S+T + F AFAAR+ T+ EE +L AV GL
Sbjct: 634 EICIDARALSHLSKKDLVFKNHKWANVLCDDMGSCATAGHMVNFNGRAMRMKTYCILV-KCVERVMQVNSPRYSRGLQVDSSTEGLRFHAFAARYNTRVEEAVLAFAVRAGL 744
BLAST of Gvermi5217.t1 vs. uniprot
Match: A0A2V3IWJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWJ3_9FLOR) HSP 1 Score: 105 bits (263), Expect = 2.020e-24 Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 0
Query: 183 CISANYLSHIPAHKLLYKNHITARVLCDSYGSCATAGHIVRYRGKAMMMKSYCAMAGSCKTKIMPVNSPRYHRALAIPSNTTDMSFTAFAARHGTKTEEYILRAAVHMGL 292
CI+ L++ +Y++H ARVLCD+ GSCAT GHI Y G MMMKSYC M C I VNSPRY L + S + +SFTA AAR+G++ EE +L + V GL
Sbjct: 56 CIAVEVLNNFERDDFVYESHRLARVLCDASGSCATGGHIFEYEGNVMMMKSYCEMQW-CTEAIRKVNSPRYRVGLRVESRSMALSFTAHAARYGSRIEEIVLTSLVRFGL 164 The following BLAST results are available for this feature:
BLAST of Gvermi5217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5217.t1 ID=Gvermi5217.t1|Name=Gvermi5217.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=293bpback to top |