Gvermi5180.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5180.t1
Unique NameGvermi5180.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length196
Homology
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A2V3J7B9_9FLOR (Eukaryotic translation initiation factor 4E type 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7B9_9FLOR)

HSP 1 Score: 380 bits (976), Expect = 2.420e-133
Identity = 185/191 (96.86%), Postives = 187/191 (97.91%), Query Frame = 0
Query:    1 MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNTDQ 191
            MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQI+NIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDANNKQLL RVE+IARR LNLE KIVLRDWSFK HNTDQ
Sbjct:    1 MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIKNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDANNKQLLGRVEAIARRVLNLEAKIVLRDWSFKPHNTDQ 191          
BLAST of Gvermi5180.t1 vs. uniprot
Match: R7QML7_CHOCR (Translation initiation factor eIF4, subunit E, type 2 (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QML7_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 5.240e-73
Identity = 114/167 (68.26%), Postives = 130/167 (77.84%), Query Frame = 0
Query:    7 SWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNL 173
            S LAA  AP       GHLLHRTY FSYV R+ ++K E+Y  QI+ IA V TVEEFW VYTHL RV+KL P TDY+LFQ+GVQPMWEDDANKRGGRL +R+QK ASPRAFEDLCLA+IGEQF+TDDICGIACSVR  EN LSIW++DA NK  +  VE+ AR  L L
Sbjct:   28 SALAAKNAPPSVP--AGHLLHRTYHFSYVRRTFEKKAENYGAQIKRIAAVATVEEFWGVYTHLQRVSKLPPMTDYYLFQEGVQPMWEDDANKRGGRLLLRVQKHASPRAFEDLCLAVIGEQFDTDDICGIACSVRFQENYLSIWVRDAKNKPAIAAVENKARGILKL 192          
BLAST of Gvermi5180.t1 vs. uniprot
Match: L8H0E9_ACACA (Eukaryotic initiation factor 4E n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H0E9_ACACA)

HSP 1 Score: 161 bits (407), Expect = 3.330e-46
Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = 0
Query:   15 PVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            P    P+GGH L   Y F +V RS  R  E+Y N I+ I    ++E FW  Y HL R + L   +DY LF++G++PMWEDDANKRGG+  IRL+K  + + +EDL LA++GEQF+  D+ICGI CS+R  E+ LS+W K A+NKQ  +++    +  LNL P   +    +K H+
Sbjct:   55 PAGVDPEGGHFLSSGYTFWFVRRSGARSQENYANAIKRIGGFRSIEGFWKYYNHLVRPHDLPNTSDYHLFKEGIKPMWEDDANKRGGKWIIRLKKGLATKYWEDLLLAIVGEQFQVGDEICGIVCSIRFNEDILSVWNKSADNKQARLKIHETLKTVLNLPPNTPME---YKCHD 226          
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A7S0BL84_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL84_9RHOD)

HSP 1 Score: 155 bits (392), Expect = 1.800e-44
Identity = 72/170 (42.35%), Postives = 111/170 (65.29%), Query Frame = 0
Query:   19 QPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQF-ETDDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAH 187
            +P G H L+  + FS++ RS   +NE Y + I+ I + G+VE+FW+ YTHL R N L  NTDY++F++ ++P+WED  NK GGR TIRL+K  + RAFED+ + L+GEQF E + + G+A SVR  E+ LS+W + ++ +  L  +  +A+ A+   P +   DW +K H
Sbjct:   16 RPVGRHQLNSRFHFSFMKRSATSRNETYGSSIKEIGSFGSVEDFWSFYTHLTRPNDLPVNTDYYVFREPIKPLWEDPENKHGGRWTIRLKKGIANRAFEDMSICLMGEQFDEYETVNGLALSVRYQEDILSLWTRTSDEQPRLDSIRDVAQAAMEYLPTMKNTDWEYKRH 185          
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A1X2G7J4_9FUNG (Eukaryotic translation initiation factor 4E n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G7J4_9FUNG)

HSP 1 Score: 151 bits (382), Expect = 5.010e-43
Identity = 74/174 (42.53%), Postives = 113/174 (64.94%), Query Frame = 0
Query:   16 VRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            ++ QP   H LH  +   ++HRS   K  +Y++ +R IA+  TVEEFW+VYTHL R N+L   +DY LF+ G++PMWED AN +GG+  +RL+K  + R +EDL LA+IG+QF+  ++ICG   S+R  E+ +SIW K ANN ++ +++    +R LNL     +    +K+HN
Sbjct:    8 LQQQPMPQHALHYAWIVWFIHRSPRTKITNYEDSMRKIASFSTVEEFWSVYTHLTRPNELPAISDYHLFKNGIRPMWEDPANVQGGKWIVRLKKGLASRYWEDLVLAMIGDQFDVHNEICGAVLSIRNSEDIISIWNKSANNGKINLKIRDTMKRILNLPSDTPME---YKSHN 178          
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A8J6BDQ0_ELECQ (Uncharacterized protein n=3 Tax=Hyloidea TaxID=8417 RepID=A0A8J6BDQ0_ELECQ)

HSP 1 Score: 149 bits (377), Expect = 4.670e-42
Identity = 81/193 (41.97%), Postives = 116/193 (60.10%), Query Frame = 0
Query:    6 KSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDR--KNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNTDQSPSS 195
            +S +AA +  V   P G H L   Y F Y  R+  R     +Y+  IR   TV +VE+FW VY+HL R   LS  TD+ LF++G++PMWEDDANK GG+  IRL+K  + R +E++ LA++GEQF   ++ICG+  S+R  E+ LSIW K AN++   +R+    RR LNL P  ++    +K HN     +S
Sbjct:   15 ESKVAARSKEVAVAP-GEHPLQYRYTFWYSRRTPSRPASTHNYEQNIRQFGTVASVEQFWRVYSHLVRPGDLSGYTDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRFWENIILAMVGEQFMVGEEICGVVVSIRFQEDILSIWNKTANDQLSTIRIRDTLRRVLNLPPNTIME---YKTHNDSLKDNS 203          
BLAST of Gvermi5180.t1 vs. uniprot
Match: UPI001CF55DEA (eukaryotic translation initiation factor 4E type 2-like n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF55DEA)

HSP 1 Score: 149 bits (375), Expect = 1.640e-41
Identity = 76/179 (42.46%), Postives = 109/179 (60.89%), Query Frame = 0
Query:   20 PKGGHLLHRTYQFSYVHRSMDR--KNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNTDQSPSS 195
            P G H L   Y F Y  R+  R     +Y+  IR   TV TVE+FW VY+HL R   LS  +D+ LF++G++PMWEDDAN+ GG+  IRL+K  + R +E++ LA++GEQF   ++ICG+  S+R  E+ LSIW K AN++   +R+    RR LNL P  ++    +K HN     +S
Sbjct:   48 PHGEHPLQYRYTFWYSRRTPSRPASTHNYEQNIRQFGTVATVEQFWRVYSHLVRPGDLSGYSDFHLFKEGIKPMWEDDANRNGGKWIIRLRKGLASRFWENIILAMLGEQFMVGEEICGVVVSIRFQEDILSIWNKTANDQISTIRIRDTLRRVLNLPPNTIME---YKTHNDSLKDNS 223          
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A068RRF4_9FUNG (Eukaryotic translation initiation factor 4e type2 isoform 3 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RRF4_9FUNG)

HSP 1 Score: 146 bits (369), Expect = 4.450e-41
Identity = 76/180 (42.22%), Postives = 115/180 (63.89%), Query Frame = 0
Query:   10 AAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            AA AA V T     H L  T+ F ++HR    K +DY+  ++ IA+  TVEEFWAVY+HL R + L   +DY LF++GV+P+WEDDAN RGG+  +RL+K  + R +E L LA++GEQF+  D+ICG   S+R+ E+ +S+W K A N ++ +++    ++ LNL  +  +    +K HN
Sbjct:    6 AAPAASVGTH----HPLSSTWVFWFMHRMPKAKIKDYEGSMKRIASFSTVEEFWAVYSHLRRPSDLPTISDYHLFKQGVRPVWEDDANIRGGKWIVRLKKGLASRYWEQLLLAIVGEQFDVGDEICGAVLSIRSSEDIISVWNKTAANGRINLKIRDTIKKMLNLPAETTME---YKTHN 178          
BLAST of Gvermi5180.t1 vs. uniprot
Match: UPI001AADCE41 (eukaryotic translation initiation factor 4E type 2-like n=3 Tax=Ranoidea TaxID=30352 RepID=UPI001AADCE41)

HSP 1 Score: 146 bits (368), Expect = 9.990e-41
Identity = 77/179 (43.02%), Postives = 108/179 (60.34%), Query Frame = 0
Query:   20 PKGGHLLHRTYQFSYVHRSMDRKNE--DYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNTDQSPSS 195
            P G H L   Y F Y  R+  R     +Y   IR   TV TVE+FW VY+HL R   LS  +D+ LF++G++PMWED+ANK GG+  IRL+K  + R +E++ LA++GEQF   ++ICG+  S+R  E+ LSIW K AN++   VR+    RR LNL P  ++    +K HN     +S
Sbjct:   26 PLGEHPLQFRYTFWYSRRTPSRPASTLNYAENIRPFGTVATVEQFWRVYSHLVRPGDLSGYSDFHLFKEGIKPMWEDEANKNGGKWIIRLRKGLASRFWENIILAMVGEQFMVGEEICGVVVSIRFQEDILSIWNKTANDQLSTVRIRDTLRRVLNLPPNTIME---YKTHNDSLKDNS 201          
BLAST of Gvermi5180.t1 vs. uniprot
Match: A0A1X2IQP9_9FUNG (Translation initiation factor eIF 4e-like domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IQP9_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 2.520e-40
Identity = 69/176 (39.20%), Postives = 116/176 (65.91%), Query Frame = 0
Query:   14 APVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQIRNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRGGRLTIRLQKAASPRAFEDLCLALIGEQFET-DDICGIACSVRTYENNLSIWLKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHN 188
            +P + +    H LH ++ F ++HRS   K  +Y++Q++ IAT  ++EEFWAVY+H+NR + L   +DY LF+ GV+PMWED AN +GG+  +R++K  + R +E+L LA+IG+QF+  D+ICG   S+R  E+ +SIW K ++N ++ +++    ++ LNL     +    +K+HN
Sbjct:   18 SPSKDEEALQHPLHYSWVFWFMHRSPGSKITNYEDQMKRIATFSSIEEFWAVYSHINRPHDLPTISDYHLFKHGVRPMWEDAANIQGGKWIVRVKKGLASRYWENLVLAIIGDQFDVQDEICGAVLSIRNSEDIISIWNKTSSNGRINLKIRDTVKKVLNLPQDTTME---YKSHN 190          
The following BLAST results are available for this feature:
BLAST of Gvermi5180.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7B9_9FLOR2.420e-13396.86Eukaryotic translation initiation factor 4E type 2... [more]
R7QML7_CHOCR5.240e-7368.26Translation initiation factor eIF4, subunit E, typ... [more]
L8H0E9_ACACA3.330e-4644.57Eukaryotic initiation factor 4E n=1 Tax=Acanthamoe... [more]
A0A7S0BL84_9RHOD1.800e-4442.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X2G7J4_9FUNG5.010e-4342.53Eukaryotic translation initiation factor 4E n=1 Ta... [more]
A0A8J6BDQ0_ELECQ4.670e-4241.97Uncharacterized protein n=3 Tax=Hyloidea TaxID=841... [more]
UPI001CF55DEA1.640e-4142.46eukaryotic translation initiation factor 4E type 2... [more]
A0A068RRF4_9FUNG4.450e-4142.22Eukaryotic translation initiation factor 4e type2 ... [more]
UPI001AADCE419.990e-4143.02eukaryotic translation initiation factor 4E type 2... [more]
A0A1X2IQP9_9FUNG2.520e-4039.20Translation initiation factor eIF 4e-like domain-c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 9..194
e-value: 2.0E-52
score: 179.6
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 17..190
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 26..176
e-value: 6.2E-45
score: 152.8
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 19..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:539493..540080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5180.t1Gvermi5180.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 539493..540080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5180.t1 ID=Gvermi5180.t1|Name=Gvermi5180.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=196bp
MAATGKSWLAAAAAPVRTQPKGGHLLHRTYQFSYVHRSMDRKNEDYKNQI
RNIATVGTVEEFWAVYTHLNRVNKLSPNTDYFLFQKGVQPMWEDDANKRG
GRLTIRLQKAASPRAFEDLCLALIGEQFETDDICGIACSVRTYENNLSIW
LKDANNKQLLVRVESIARRALNLEPKIVLRDWSFKAHNTDQSPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like
IPR001040TIF_eIF_4E