Gvermi3787.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi3787.t1
Unique NameGvermi3787.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length274
Homology
BLAST of Gvermi3787.t1 vs. uniprot
Match: R7QJI9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJI9_CHOCR)

HSP 1 Score: 186 bits (471), Expect = 1.260e-53
Identity = 105/193 (54.40%), Postives = 139/193 (72.02%), Query Frame = 0
Query:   81 PAHMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLGTGLLSLLSDSRRSPVPTDDDVGR 273
            P   P     ++ LRSRGL D LVV L+SALP VELR GIPVGF+L + PL+T LL+V+GN+ P++P++ +LR+  VQ +A+ VLDRARKKA +V N++S+A ALALFVGVPLPGTGAWTG LVAFVL MPF  +F +L  GVV AA I+T LC +G+ G  +A ++L+G G+ S+     R  V   +D G+
Sbjct:  132 PEKKPLSQRISDKLRSRGLPDELVVFLVSALPAVELRAGIPVGFVLNMHPLKTLLLAVLGNLAPILPLMLILRVRFVQALAARVLDRARKKAAAVGNANSRAVALALFVGVPLPGTGAWTGSLVAFVLGMPFGQSFAALAAGVVMAASIMTVLCALGKVGALVAGTLLVGMGVSSVF----RGGVGASEDEGK 320          
BLAST of Gvermi3787.t1 vs. uniprot
Match: UPI001E1D94F8 (uncharacterized protein LOC123544149 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D94F8)

HSP 1 Score: 169 bits (427), Expect = 3.750e-47
Identity = 102/200 (51.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query:   65 LPLGSQAAAPRVAFHTPA-------HMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLGTGLLSLL 257
            LP+   A APR   H P        H P G   A  L+ RG+SD  VV  +SA+PVVELRGGIP+GFL G+ P++ F L+V GNMLPV  ++A LRL +V+R+A P+L+RARK A S+ +S S A ALALFVGVPLPGTGA+TG  +A +LDM   ++  S+  GV+ AA I+T L  MG+TG A+A   +L  G+ S+L
Sbjct:   96 LPVPCTAIAPRA--HPPVSSAQVIKHEPIGQRIATALKLRGISDEAVVFTVSAMPVVELRGGIPLGFLFGMHPVKVFALAVAGNMLPVFAILAFLRLAIVRRLAEPLLNRARKLASSLGDSRSLATALALFVGVPLPGTGAFTGTFIACILDMSIMTSLISVGAGVLMAACIMTLLSSMGKTGAAVAVIAMLVVGIASIL 293          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A7S1UC67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC67_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.790e-44
Identity = 85/163 (52.15%), Postives = 122/163 (74.85%), Query Frame = 0
Query:   87 GHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLL 249
            G + A  L S GL   ++++LISA+PVVELRGG+PVG  +G+P  +T LL V GNMLP++P++A LRLPLV++I SP+L RA+ KAE+ ++ S+Q + LALFVG+PLPGTGAWTG + A++LDMP ++A  ++  GVV AA I++ + + G TGG +A   L+
Sbjct:  120 GQKVAMALESTGLPQEVILMLISAMPVVELRGGVPVGIWMGLPIWKTALLCVTGNMLPILPLLAALRLPLVRKIMSPILKRAQSKAEAFADKSTQVRGLALFVGIPLPGTGAWTGAMGAYLLDMPIKTALGAIFAGVVLAAGIMSLVTVTGTTGGIVATLALI 282          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A7S0EDQ4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDQ4_9EUKA)

HSP 1 Score: 156 bits (394), Expect = 1.770e-42
Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 0
Query:   68 GSQAAAPRVAFH----TPAHMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGG--AIAASVLLGTGLL-SLLSDSR--RSPVPTDDDV 271
            GS  A P +A      T  H+  G + A F +  GL D  V+LLIS  P VELRGG+PVG  LG+ PL TF++ V+GNMLP++P +  LR   V+++A+P+L RA  K  ++ +  S++ ALALFVGVP PGTGAWTG ++A +LDMP + A  S+L GVV A  I+T L L G+TG   A+AA    G G + S LS  +  ++P PTD + 
Sbjct:   73 GSVVAMPTLALASATATGEHLHLGQKIALFFKRTGLPDWAVLLLISMAPAVELRGGVPVGNWLGLSPLTTFVICVVGNMLPILPTLLALRSDAVKKVAAPLLKRAESKLAALPSGQSRSLALALFVGVPAPGTGAWTGAIIASLLDMPLQEAMGSILAGVVLAGGIMTVLTLAGKTGALLALAAMCAAGVGAIRSALSKEKAAQAPAPTDAET 285          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A7S0ZJT6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJT6_9RHOD)

HSP 1 Score: 149 bits (375), Expect = 9.800e-40
Identity = 75/159 (47.17%), Postives = 114/159 (71.70%), Query Frame = 0
Query:   94 LRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSS--SQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLG 250
            LRS  + D  ++++IS+LP++ELR GIP+GF L + P+ TF L ++GN LP++P++ LLR+P ++ +ASP+L RAR K   + +++  S   AL++F+G+PLPGTGAWTG  +A VL  P + +FF++L G+V +A IV SLCL+G  G AI    L+G
Sbjct:  107 LRSYSIPDEFILIIISSLPILELRAGIPLGFYLNIHPISTFFLCILGNTLPMLPILFLLRIPFLESLASPLLSRARNKMHEIQSNTRFSPYAALSVFIGIPLPGTGAWTGVTIAHVLGFPIKESFFAILAGIVMSAVIVQSLCLLGWIGAAIVGLTLVG 265          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A6H5K120_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K120_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.380e-39
Identity = 86/170 (50.59%), Postives = 114/170 (67.06%), Query Frame = 0
Query:   82 AHMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSA---FFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVL 248
            AH+  G + A F R  GL D   ++ ISA+PVVELRGG+PVG  +G+P  + F L V GNM+P+  ++  LR   VQ++A PVLDRAR+KA    +  SQA AL LFVG+PLPGTGAWTG + AF+L MPF+ A     S+ +GVVSA  I++ L L G+ G  +A +VL
Sbjct:  165 AHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASKAMLSIFLGVVSAGVIMSCLTLAGKAGALVATAVL 334          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A7S0IW87_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW87_9EUKA)

HSP 1 Score: 147 bits (370), Expect = 5.960e-39
Identity = 88/201 (43.78%), Postives = 129/201 (64.18%), Query Frame = 0
Query:   58 PLHSQST---LPLGSQAAAPRVAFHTPA--HMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLGTGL 253
            PL S +T   L LG    +P +A  +    H+  G + A F +  GL +  V++LISA P VELRGG+PVG  +G+ P  TFL+ V+GNMLP+ P +  LR   V+++A+P+L RA KK   +    S+  ALALFVG+P PGTGAWTG ++A++LDMPF ++  ++L GV+ A  I+T L ++G+ G  +A S L+  G+
Sbjct:   83 PLSSATTSAALTLGLVLLSPALALASGGAEHLHLGQKVALFFQQTGLPNWAVLMLISATPAVELRGGVPVGNWMGISPAATFLICVLGNMLPIAPTLLALRSAFVKKLAAPLLTRAEKKLAGLPKGQSRTLALALFVGIPAPGTGAWTGAIIAYLLDMPFTTSMGAILAGVLLAGVIMTVLTVLGKFGALLALSGLIFFGV 283          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A1E7FFY0_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFY0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.540e-39
Identity = 94/200 (47.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:   72 AAPRVAFHTPAHMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAES--VSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLGTGLLSLLSDSRRSPVPTDD 269
            AA +    T  H+ +G + ANF  S GL    V+  ISA+PVVELRG IPVG  +G+P  Q  L  VIGNM+P++P++ LL+ P ++++ SP+L+RA KKA    V +   Q  +LA FVG+PLPGTGAWTG + +F+L MP   A  S+  GVVSA  I+T+L L GRTGG IA SVL+      +L   ++S  PT +
Sbjct:  119 AAKKAVVETVEHLHTGQKIANFFMSFGLPKWAVLATISAMPVVELRGAIPVGVWMGLPIQQVLLTCVIGNMIPIVPLLFLLKNPSLKKLMSPILNRAEKKAAGLGVGSLEKQWVSLAAFVGIPLPGTGAWTGAMGSFLLGMPTLFALSSIFAGVVSAGLIMTALTLAGRTGGLIAISVLIAFAANEVLF--KKSSTPTQE 316          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A7S2Y2N1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2N1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.330e-37
Identity = 85/183 (46.45%), Postives = 125/183 (68.31%), Query Frame = 0
Query:   66 PLGSQAA-APRVAFHTPAHMPSGHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASV 247
            PL + AA A   A     H+  G + AN  R  GL D +V+++ISA+PVVELRGGIPVG  +G+P L    L V+GN++P+IP++A L+   +Q++  PVLDRA +K++ + +  +++ A+ALFVG+PLPGTGAWTG + AF+L M FR +  ++  GV+ A  I++ L   G+TG AIAA+V
Sbjct:  142 PLSASAAEALSTAVSAEEHLHLGQKIANQFRKTGLPDEVVLMIISAMPVVELRGGIPVGQWMGLPLLNVLALCVVGNLIPIIPLLAALKNKTIQKVMKPVLDRAAEKSKGLGSEKNRSLAVALFVGIPLPGTGAWTGAMGAFLLGMGFRESASAISAGVLLAGIIMSILVKAGKTG-AIAATV 323          
BLAST of Gvermi3787.t1 vs. uniprot
Match: A0A6U3YD80_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YD80_9STRA)

HSP 1 Score: 140 bits (354), Expect = 7.680e-37
Identity = 77/140 (55.00%), Postives = 99/140 (70.71%), Query Frame = 0
Query:   87 GHEAANFLRSRGLSDSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIALLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWTGCLVAFVLDMPFRSAFFSLLVGVVSA 226
            G + A   + RGLSD +VV LISA+PVVELRG IPVG  +G+P  +   L ++GNMLP+ P++ LLR   VQR+  PVLDRA+ KA +  +  S+A  LA FVG+PLPGTGAWTG + AF+L MPF +A  S+  GVVSA
Sbjct:   92 GQKVARVFQGRGLSDEMVVCLISAMPVVELRGAIPVGAWMGLPLPKVLGLCIVGNMLPIAPILYLLRFGPVQRLLKPVLDRAQSKASAFKDERSRAMLLAAFVGIPLPGTGAWTGAMGAFLLGMPFPTAMASIFAGVVSA 231          
The following BLAST results are available for this feature:
BLAST of Gvermi3787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QJI9_CHOCR1.260e-5354.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D94F83.750e-4751.00uncharacterized protein LOC123544149 n=1 Tax=Merce... [more]
A0A7S1UC67_9STRA5.790e-4452.15Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S0EDQ4_9EUKA1.770e-4246.48Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0ZJT6_9RHOD9.800e-4047.17Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6H5K120_9PHAE2.380e-3950.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0IW87_9EUKA5.960e-3943.78Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A1E7FFY0_9STRA6.540e-3947.00Ferredoxin--NADP(+) reductase n=1 Tax=Fragilariops... [more]
A0A7S2Y2N1_9STRA1.330e-3746.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U3YD80_9STRA7.680e-3755.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009577Putative small multi-drug exportPFAMPF06695Sm_multidrug_excoord: 115..229
e-value: 3.0E-31
score: 108.6
IPR009577Putative small multi-drug exportPANTHERPTHR36007TRANSPORT PROTEIN-RELATEDcoord: 90..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 234..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..208
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..273
NoneNo IPR availableTMHMMTMhelixcoord: 241..258
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 215..237
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..35
score: 7.745604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:4281850..4282671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3787.t1Gvermi3787.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_41 4281850..4282671 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi3787.t1 ID=Gvermi3787.t1|Name=Gvermi3787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=274bp
MAASKTASRRRVARGIASIAAVGAVLTLCTARAHALAPPSPSPAITAVQQ
TKATLTNPLHSQSTLPLGSQAAAPRVAFHTPAHMPSGHEAANFLRSRGLS
DSLVVLLISALPVVELRGGIPVGFLLGVPPLQTFLLSVIGNMLPVIPVIA
LLRLPLVQRIASPVLDRARKKAESVSNSSSQAKALALFVGVPLPGTGAWT
GCLVAFVLDMPFRSAFFSLLVGVVSAAFIVTSLCLMGRTGGAIAASVLLG
TGLLSLLSDSRRSPVPTDDDVGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009577Sm_multidrug_ex
IPR006311TAT_signal