Gvermi1884.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi1884.t1
Unique NameGvermi1884.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
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BLAST of Gvermi1884.t1 vs. uniprot
Match: UPI000B796AE7 (uncharacterized protein LOC110660948 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B796AE7)

HSP 1 Score: 57.4 bits (137), Expect = 2.480e-6
Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 0 
Query:    9 VALKRSNWITWRDLMLTLLKSQSLHQFLYE--GEDAPAEEHDDEAKASFLMK---KNIAPELYYLVRNLSRPHEIWAALRRHYGSTSKRNIQTCKRALRDITIESCSFDITTYLQKKADAIDALLDLDVNIDDNEMSDHILKGLEKDFR 152
            + L  SN++ W+  ++ LL   S HQ ++   G   P +  D   K   ++     +++  +   V   +  H  W  L+  Y S S+  I+T K AL  +T ++ S  I TY+       D L  LD  I ++++ DHIL+GL  ++R
Sbjct:   25 IKLTSSNYLLWKTQIIPLL---SRHQLIHHINGSKPPPKYTDRYIKDQIMLGWLLSSLSKSVLSQVVGATTMHSAWTCLQTIYASGSRAQIRTLKNALHSLTRDNNS--IATYMDHAKRLFDQLPALDAPISEDDLVDHILRGLGLEYR 168
The following BLAST results are available for this feature:
BLAST of Gvermi1884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000B796AE72.480e-628.19uncharacterized protein LOC110660948 n=1 Tax=Hevea... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 49..152
e-value: 1.0E-12
score: 48.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1622contigScGOVlb_1622:1191966..1192628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi1884.t1Gvermi1884.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1622 1191966..1192628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi1884.t1 ID=Gvermi1884.t1|Name=Gvermi1884.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MASEGTKIVALKRSNWITWRDLMLTLLKSQSLHQFLYEGEDAPAEEHDDE
AKASFLMKKNIAPELYYLVRNLSRPHEIWAALRRHYGSTSKRNIQTCKRA
LRDITIESCSFDITTYLQKKADAIDALLDLDVNIDDNEMSDHILKGLEKD
FRLTDFLFFKSTQDNSDYHRLISDIQVYVNSHSFKMKHGRKNKSHRANDT
KRFQKRKKNSYHCDFCNKSG*
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