Gvermi13803.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13803.t1
Unique NameGvermi13803.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length138
Homology
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BLAST of Gvermi13803.t1 vs. uniprot
Match: A0A2V3IW47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW47_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 4.380e-44
Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 0 
Query:    1 MQVTAFTDQLADLRMRYQITYMKDSIMVWVQPTTDGSLGSLSCLSVCMGHKINEEALPSATTLFATNAQIASTSHGFAQKLSMRSGLAVYACVDIPDDAAVLEDIIFRRVLRELQSHGLTSPVEH 125
            M+V AFT+Q+ADLRMRYQ+T M DS+ VWVQPTTD S GSL  LS+ +G  +  E+LPSATT+FA     A+ S  FAQKL+ R+ LAVYACVD+PDDAAVLE+ IF RVL +LQ+        H
Sbjct:    1 MEVIAFTEQMADLRMRYQLTLMNDSVFVWVQPTTDSSQGSLPNLSISLGQALQNESLPSATTIFAAAPTAAAKSRAFAQKLAKRTSLAVYACVDLPDDAAVLENTIFTRVLTQLQTRNFVPAHNH 125
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BLAST of Gvermi13803.t1 vs. uniprot
Match: UPI001E1DDAE2 (uncharacterized protein LOC123543821 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDAE2)

HSP 1 Score: 62.4 bits (150), Expect = 7.200e-10
Identity = 42/114 (36.84%), Postives = 59/114 (51.75%), Query Frame = 0 
Query:    1 MQVTAFTDQLADLRMRYQITYMKDSIMVWVQPTTDGSLGSLSCLSVCMGHKINEEALPSATTLFATNAQIASTSHGFAQKLSMRSGLAVYACVDIPDDAAVLEDIIFRRVLREL 114
            M V   T+  AD+ +R Q+    +S+ VWV  +TD S  SL+  +   G +     L   +         A  S  FA+KLS RSGL VY CV +  DA +L+D I +RVL E+
Sbjct:    1 MLVVGLTETFADVSVRIQLIRFSESVHVWV--STDASAPSLAIATP--GRRAASSVLLGGSG--------AVDSLAFAEKLSFRSGLTVYTCVQLSPDAKLLKDSIMKRVLAEM 102
The following BLAST results are available for this feature:
BLAST of Gvermi13803.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW47_9FLOR4.380e-4459.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001E1DDAE27.200e-1036.84uncharacterized protein LOC123543821 n=1 Tax=Merce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 16..95
e-value: 1.3E-10
score: 41.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:196742..197155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13803.t1Gvermi13803.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 196742..197155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13803.t1 ID=Gvermi13803.t1|Name=Gvermi13803.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=138bp
MQVTAFTDQLADLRMRYQITYMKDSIMVWVQPTTDGSLGSLSCLSVCMGH
KINEEALPSATTLFATNAQIASTSHGFAQKLSMRSGLAVYACVDIPDDAA
VLEDIIFRRVLRELQSHGLTSPVEHENGTRVEAAAHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4