Gvermi13802.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi13802.t1
Unique Name	Gvermi13802.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	468

Homology

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BLAST of Gvermi13802.t1 vs. uniprot
Match: A0A2V3IV31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV31_9FLOR)

HSP 1 Score: 431 bits (1108), Expect = 4.540e-143
Identity = 251/469 (53.52%), Postives = 303/469 (64.61%), Query Frame = 0

Query:    2 RSASVDRFPFD-PFEPRFPFERRRALDDFPLGLDQH-PMHEPFMDELEPPFPHRHRRRSHFYEDFGAPQFSDQPPRFS-IDRAMRFPARTPNIVFMQQRSFVFNVGSPADSRVPWLQVMDEFDGRRVLYATGNCMQRASQVRLHDDYSGELLRLTPRKSSTKSRKYASLRVTTFNKYRDPVMTAVSMRDAIGPTNLQGAGPPXXXXXXXFAYAPNANPYYPPQGAYPYPXXXXMPSYGAPPTGYPGMPAGAPNAAQPDVTE-PQSAPDASGDPYSAPWDAAHQQPQGEVPDYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYANYMHGFAYQNNSGRPPFQRWETSDQPMVVAEFFGGEKSLDDIRRSSRDGRRKHPLFRLARNAGGEKEWVQTPTGRELASITYSSPGSDGFAVEGNSYRVVLQPGVDLTMITSAIVSRVVMWA-GTDA 465
            RS+S+ R PF+ PF PRFP++     DDFPL  D+H P+  P +D  EPPF   HRRR  F++D G P F D       ID AMRFPARTPNIVFM+ RSF+ NVGSPADSRVPWLQ+MDE++GRRVLYATGNCMQR SQVRL+DD+SGELLRL PRKSS+KSR+YASLRV TFNKYRDPVMT+VSMR A GP   QG  PP       +    +ANPYYPPQ AYPY     M    AP   YPGM  G  N   P      QS  + +G  Y  P++ + QQP+G VP YP                                              M A+ M+ F Y    GRP  Q W++ +  + VAEFFGGE+S+D+IR S RDGRRK+PLFRL R+A G KE++Q+ +GRELA+ITY+S GSD FAVEGNSYRV+L PGVDLTMI++A+VSR+++WA GT A
Sbjct:  125 RSSSLGRTPFEQPFNPRFPYQHPLEFDDFPLPFDEHHPLDGPPIDAFEPPFMPPHRRRPPFFDDHG-PDFPDXXXXXXXIDHAMRFPARTPNIVFMEPRSFLCNVGSPADSRVPWLQIMDEYEGRRVLYATGNCMQRNSQVRLNDDFSGELLRLVPRKSSSKSRRYASLRVITFNKYRDPVMTSVSMRRADGPITPQGP-PPPPFAFHAYPNTGSANPYYPPQPAYPYAGPYGM-XXXAPGPAYPGMQQGNVNPPPPPENPMQQSTANTNGTEYPGPFNNSQQQPEG-VPFYPQPDQTREPAQEYPGPQQQYQQWQGMYYQPPPNYSNQDCAQGFKPN-MNADQMYNFGYPGYGGRPQHQGWDSMNH-VTVAEFFGGERSMDEIRHSRRDGRRKNPLFRLVRSADGSKEFIQSSSGRELANITYASIGSDAFAVEGNSYRVMLHPGVDLTMISAALVSRIIIWAHGTGA 587

The following BLAST results are available for this feature:

BLAST of Gvermi13802.t1 vs. uniprot

BLAST of Gvermi13802.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IV31_9FLOR	4.540e-143	53.52	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..332

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_647	contig	ScGOVlb_647:195154..196557 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi13802.t1	Gvermi13802.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_647 195154..196557 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi13802.t1 ID=Gvermi13802.t1|Name=Gvermi13802.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=468bp
MRSASVDRFPFDPFEPRFPFERRRALDDFPLGLDQHPMHEPFMDELEPPF
PHRHRRRSHFYEDFGAPQFSDQPPRFSIDRAMRFPARTPNIVFMQQRSFV
FNVGSPADSRVPWLQVMDEFDGRRVLYATGNCMQRASQVRLHDDYSGELL
RLTPRKSSTKSRKYASLRVTTFNKYRDPVMTAVSMRDAIGPTNLQGAGPP
PPPPPPPFAYAPNANPYYPPQGAYPYPGPYPMPSYGAPPTGYPGMPAGAP
NAAQPDVTEPQSAPDASGDPYSAPWDAAHQQPQGEVPDYPQPDQSRQPGQ
EYPGPQPQYQHWQGTHYQPSSAYPNQTYPQPGQQPGMYANYMHGFAYQNN
SGRPPFQRWETSDQPMVVAEFFGGEKSLDDIRRSSRDGRRKHPLFRLARN
AGGEKEWVQTPTGRELASITYSSPGSDGFAVEGNSYRVVLQPGVDLTMIT
SAIVSRVVMWAGTDARF*