Gvermi13798.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13798.t1
Unique NameGvermi13798.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length280
Homology
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BLAST of Gvermi13798.t1 vs. uniprot
Match: A0A2V3IZ89_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ89_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 5.790e-72
Identity = 109/196 (55.61%), Postives = 136/196 (69.39%), Query Frame = 0 
Query:    9 ACLVLALLACALAQPPHDVVKFSPFDLSSISLYGPLAIYRPQWCPSSVSFAMRARALPELADDKIGLFTSDIYMDDQPCTSSTSMLLFTPIGRPPHLPPQWVFEDSAISGNAVNFTCGSSTYAIRYGYLNDVHTPSGFLDDTVVYLDFAVIPNTLPFSFCSYATRRNDNERPVDHAPFPTVQTWNKIRATNDLPPL 204
            AC +LA    ALAQ P   V+FS  D+S IS YG  A+YRP  CP+S+SF  R R L EL+ + +G++TS+I  D QPC+S TS++ F+PIGRP HLPPQWVFED+   G  VN TCG+  + +RYGYLNDV TP+G+LD    YLDFAV P T PF+FCSY   R D  R VD APFPT+ +WN  RA  +LPP+
Sbjct:   11 ACALLAAATRALAQHP---VQFSASDISQISFYGASAVYRPDSCPNSISFNARVRQLAELSPEALGMYTSEIAADGQPCSSPTSVISFSPIGRPEHLPPQWVFEDAVQKGMPVNLTCGTWAFTVRYGYLNDVKTPNGYLDANKAYLDFAVYPYTTPFAFCSYVAERTDQSRAVDLAPFPTLDSWNSARAAKNLPPV 203
The following BLAST results are available for this feature:
BLAST of Gvermi13798.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ89_9FLOR5.790e-7255.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:182857..183801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13798.t1Gvermi13798.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 182857..183801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13798.t1 ID=Gvermi13798.t1|Name=Gvermi13798.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=280bp
MFPHALLRACLVLALLACALAQPPHDVVKFSPFDLSSISLYGPLAIYRPQ
WCPSSVSFAMRARALPELADDKIGLFTSDIYMDDQPCTSSTSMLLFTPIG
RPPHLPPQWVFEDSAISGNAVNFTCGSSTYAIRYGYLNDVHTPSGFLDDT
VVYLDFAVIPNTLPFSFCSYATRRNDNERPVDHAPFPTVQTWNKIRATND
LPPLPEPDSQQDVEQMPVPSAEPVEPEMDAIPSPEDTEPVPMPPMLFPSP
EAAIPAPFTSRLVDALTSAVSRAIASIRL*
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