Gvermi13670.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13670.t1
Unique NameGvermi13670.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length514
Homology
BLAST of Gvermi13670.t1 vs. uniprot
Match: PSBB_PORPU (Photosystem II CP47 reaction center protein n=204 Tax=Eukaryota TaxID=2759 RepID=PSBB_PORPU)

HSP 1 Score: 1011 bits (2614), Expect = 0.000e+0
Identity = 475/513 (92.59%), Postives = 498/513 (97.08%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            M LPWYRVHTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFM R+GVTDSWGGWS+TGESVSNPGLWS EGVA+THIVLSGMLFLA+IWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFH TGLFGPG+W+SDGYG+TGKV P+APAWGP+GFNPFNP GVASHHIAAGTVGILAG+FHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAF+TCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIE+RVEN++ +GA P EAWS+IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDG+AEAWLGHP+FQDKEGREL+VRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVT +FYGGKLNG+ FNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGLWSLEGVALTHIVLSGMLFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHVTGLFGPGMWVSDGYGVTGKVLPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFITCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIEKRVENAIADGAAPSEAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGVAEAWLGHPVFQDKEGRELSVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTASFYGGKLNGQVFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: A0A1C9CAR4_9FLOR (Photosystem II CP47 reaction center protein n=16 Tax=Florideophyceae TaxID=2806 RepID=A0A1C9CAR4_9FLOR)

HSP 1 Score: 999 bits (2583), Expect = 0.000e+0
Identity = 470/513 (91.62%), Postives = 494/513 (96.30%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            M LPWYRVHTVVLNDPGRLISVHLMHTALV+G    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFM R+GVTDSWGGWS+TGES+SNPGLWSFEGVAITHIVLSG+LFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLL+SLLCF FGAFH TGLFGPGIWISD YGITGKVQ +AP WGPDGFNPFNP G+ASHHIAAGTVGILAG+FHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAF+TCGTMWYGSATTP+ELFGPTRYQWDSGYFQQEIE+RVE+SL EG+   EAWS+IPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAE WLGHPIFQDKEGREL VRRMPAFFETFPVIL+DKDGIIRADIPFRRAESKYSIEQVGVT +FYGGKLNGK+F+DAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVT+QVEFGAFQKLGD++SKKQGAV
Sbjct:    1 MGLPWYRVHTVVLNDPGRLISVHLMHTALVSG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESISNPGLWSFEGVAITHIVLSGLLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLASLLCFSFGAFHITGLFGPGIWISDAYGITGKVQAVAPEWGPDGFNPFNPGGIASHHIAAGTVGILAGIFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFITCGTMWYGSATTPLELFGPTRYQWDSGYFQQEIEKRVESSLGEGSNQFEAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAETWLGHPIFQDKEGRELNVRRMPAFFETFPVILIDKDGIIRADIPFRRAESKYSIEQVGVTASFYGGKLNGKTFSDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTDQVEFGAFQKLGDKTSKKQGAV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: PSBB_TRICV (Photosystem II CP47 reaction center protein n=91 Tax=Sar TaxID=2698737 RepID=PSBB_TRICV)

HSP 1 Score: 976 bits (2523), Expect = 0.000e+0
Identity = 453/513 (88.30%), Postives = 490/513 (95.52%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            MALPWYRVHTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTR+G+TDSWGGWS+TGESVSNPG+WSFEGVA++HI+LSGM FLA+IWHWVYWDLELFRDPRTGEPALDLPKIFGIHL LS LLCFGFGAFH TGLFGPGIW+SD YG+TGKVQP+APAWG DGFNPFNP G+A+HHIAAG  GI AG+FHLTVRPPQRLYRALRMGNIETVLSSSI+AVFF+AFVT GTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S++EG +  +AWS+IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIF+DK+GRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTV+FYGGKLNG++F DAP+VKK+ARKAQLGEVFEFDRT+LESDGVFRSSPRGW+TFGHANFAL+FFFGHLWHG RTIFRDVF GIGAEVTEQVEFGAFQKLGD+S+KKQGAV
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSITGESVSNPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEGLSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKSTKKQGAV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: PSBB_GUITH (Photosystem II CP47 reaction center protein n=12 Tax=Cryptophyceae TaxID=3027 RepID=PSBB_GUITH)

HSP 1 Score: 975 bits (2520), Expect = 0.000e+0
Identity = 452/513 (88.11%), Postives = 488/513 (95.13%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            M LPWYRVHTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGM+VMPFM RIGVTDSWGGWS+TGESVSNPG WSFEGVA+ HI LSG+LFLA++WHWVYWDLELFRDPRTG PALDLPKIFGIHL+L+ LLCFGFGAFH TG +GPGIW+SD YGITGKVQP+AP WGP+GFNPFNPSGVASHHIAAG +G +AG+FH+ VRPPQRLYRALRMGNIETVLSSSI+AVFF+AF+T GTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEG +  EAWS+IPDKLAFYDY+GNNPAKGGLFRAGPM+KGDGIAEAWLGHP+FQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYS+EQVGVTV+FYGGKLNG+++ DAP+VKKYARKAQLGEV EFDRTTLESDGVFRSSPRGW+TFGHANFAL+FF GHLWHGSRT+FRDVF+GIGAEVTEQVEFGAFQKLGDRS+KKQGAV
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMYVMPFMARIGVTDSWGGWSITGESVSNPGFWSFEGVALAHIGLSGLLFLAAVWHWVYWDLELFRDPRTGNPALDLPKIFGIHLVLAGLLCFGFGAFHVTGAWGPGIWVSDAYGITGKVQPVAPTWGPEGFNPFNPSGVASHHIAAGILGFIAGIFHIAVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITTGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGLSLSEAWSRIPDKLAFYDYVGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSVEQVGVTVSFYGGKLNGQTYTDAPTVKKYARKAQLGEVLEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGSRTLFRDVFSGIGAEVTEQVEFGAFQKLGDRSTKKQGAV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: Q4G3C5_EMIHU (Photosystem II CP47 reaction center protein n=20 Tax=Eukaryota TaxID=2759 RepID=Q4G3C5_EMIHU)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 453/513 (88.30%), Postives = 488/513 (95.13%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            MALPWYRVHTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFM R+GVTDSWGGWS+TGESVSNPG+WSFEGVA+THIVLSGM FLA+IWHWVYWDLELFRDPRTGEPALDLPKIFGIHL LSSLLCFGFGAFH TG FGPGIW+SD YGITG+VQ +APAWG +GFNPFNP G+ASHHIAAG +G+LAG+FHLT+RPPQRLYRALRMGNIETVLSSSISAVFF+AF+T GTMWYG+ATTPIELFGPTRYQWDSGYFQQEIERRVE+SL+EG +  +AWS+IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHP+FQDKEGRELTVRRMPAFFETFPVILVDKDGI+RADIPFRRAESKYSIEQVGV+ NFYGGKLNG+ F DAP+VKKYARK+QLGEVFEFDRTTLESDGVFRSSPRGW+TFGHANFAL+FF GHLWHG RT+FRDVFAGIGAEV EQVEFGAFQKLGD+S+KKQG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSSLLCFGFGAFHVTGTFGPGIWVSDAYGITGRVQAVAPAWGAEGFNPFNPGGIASHHIAAGILGLLAGVFHLTIRPPQRLYRALRMGNIETVLSSSISAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVESSLSEGLSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIVRADIPFRRAESKYSIEQVGVSCNFYGGKLNGQVFTDAPTVKKYARKSQLGEVFEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTLFRDVFAGIGAEVLEQVEFGAFQKLGDKSTKKQGIV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: A0A1C9CDW4_PORSO (Photosystem II CP47 reaction center protein n=1 Tax=Porphyridium sordidum TaxID=28024 RepID=A0A1C9CDW4_PORSO)

HSP 1 Score: 972 bits (2513), Expect = 0.000e+0
Identity = 452/505 (89.50%), Postives = 489/505 (96.83%), Query Frame = 0
Query:    9 HTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            HTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTR+GVTDSWGGWS+TGESVSNPG+WSFEGVA+THIVLSG+LFLA+IWHW+YWDLELFRDPRTGEPALDLPKIFGIHLLL+S+LCFGFGAFH TGLFGPGIW+SD YGITGKVQP+APAWGP+GFNPFNP GVASHHIAAGTVGILAG+FHL++RPPQRLYRALRMGNIETVLSSSI+AVFF+AF+T GTMWYGSATTPIELFGPTRYQWDSGYFQQEIER+VENSL+EG +  +AWS+IPDKLAFYDYIGNNPAKGGLFR+GPMDKGDGIAEAWLGHP+F+DKEGRELTVRRMPAFFETFPVILVD+DGIIRADIPFRRAESKYSIEQVGVT++FYGGKLNG+SF DAP+VKKYARKAQLGEVFEFDR TLESDGVFRSSPRGW+TFGHANFAL+FFFGHLWHGSRT+FRDVFAGIGAEVTEQ EFGAF KLGDR++KKQG V
Sbjct:    8 HTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGLLFLAAIWHWIYWDLELFRDPRTGEPALDLPKIFGIHLLLASILCFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLSIRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERQVENSLSEGLSLNDAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMDKGDGIAEAWLGHPVFKDKEGRELTVRRMPAFFETFPVILVDQDGIIRADIPFRRAESKYSIEQVGVTIDFYGGKLNGQSFTDAPTVKKYARKAQLGEVFEFDRITLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFAGIGAEVTEQAEFGAFTKLGDRTTKKQGIV 508          
BLAST of Gvermi13670.t1 vs. uniprot
Match: B7T1V1_VAULI (Photosystem II CP47 reaction center protein n=11 Tax=Ochrophyta TaxID=2696291 RepID=B7T1V1_VAULI)

HSP 1 Score: 968 bits (2502), Expect = 0.000e+0
Identity = 453/513 (88.30%), Postives = 482/513 (93.96%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            M LPWYRVHTVVLNDPGRLISVHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTR+GVTDSWGGWS+TGESVSNPG+WSFEGVA+THIVLSG+ FLA+IWHWVYWDLELFRD RTGEP LDLPKIFGIHL LS LLCFGFGAFH TGLFGPGIW+SD YGITGK+QP+APAWGP+GFNPFNP G+ASHHIAAGT GILAG+FHLT+RPPQRLYRALR+GNIETVLSSSISAVFF+AF+T GTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SLNEG +  E W+ IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIF+DKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAES YSIEQVGV V+FYGGKLNG+SF DA +VKK+ARKAQLGEVFEFDRT+LESDGVFRSSPRGW+TFGH NF L+FF GHLWHGSRTIFRDVF GIGAEVTEQVEFGAFQKLGD S++KQG V
Sbjct:    1 MGLPWYRVHTVVLNDPGRLISVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDLRTGEPTLDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGITGKIQPVAPAWGPEGFNPFNPGGIASHHIAAGTFGILAGVFHLTIRPPQRLYRALRIGNIETVLSSSISAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNEGLSESETWANIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESXYSIEQVGVNVSFYGGKLNGQSFKDAQTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHVNFGLLFFLGHLWHGSRTIFRDVFTGIGAEVTEQVEFGAFQKLGDESTRKQGIV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: Q85FZ5_CYAM1 (Photosystem II CP47 reaction center protein n=4 Tax=Cyanidiaceae TaxID=265316 RepID=Q85FZ5_CYAM1)

HSP 1 Score: 961 bits (2484), Expect = 0.000e+0
Identity = 449/513 (87.52%), Postives = 486/513 (94.74%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            MALPWYRVH VVLNDPGRLISVHLMHTALVAG    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFM R+GVTDSWGGWSVTGE+V NPGLWSFEGVA+THIVLSG+LFLASIWHWVYWDLELFRD RTGEPALDLPKIFGIHLLL+SLLCFGFGAFH TG+FGPGIW+SD YG+TGKVQP+APAWGP+GFNP+NP GVASHHIAAGTVGILAG+FHL VRPPQRLYRALRMGNIETVLSSSI+AVFF+AFV  GTMWYGSATTPIELFGPTRYQWDSGYFQQE+ERRV+ ++++GA+  EAWSKIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIA+AWLGH +FQDK+GRELTVRRMPAFFETFPVILVDKDGI+RADIPFRRAESKYSIEQVGVT  FYGGK NG+ F DA SVK+YARKAQLGEVFEFDR++L+SDGVFR+SPRGWFTF HANFAL+FFFGHLWHG+RTIFRDVFAGIGAEVTEQVEFG FQK+GDRS+KKQ +V
Sbjct:    1 MALPWYRVHIVVLNDPGRLISVHLMHTALVAG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSVTGENVVNPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDLELFRDARTGEPALDLPKIFGIHLLLASLLCFGFGAFHVTGVFGPGIWVSDAYGLTGKVQPVAPAWGPEGFNPYNPGGVASHHIAAGTVGILAGVFHLNVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSGYFQQEMERRVQANVSQGASLAEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAQAWLGHAVFQDKQGRELTVRRMPAFFETFPVILVDKDGIVRADIPFRRAESKYSIEQVGVTCQFYGGKFNGQKFTDAASVKRYARKAQLGEVFEFDRSSLDSDGVFRTSPRGWFTFAHANFALLFFFGHLWHGARTIFRDVFAGIGAEVTEQVEFGVFQKVGDRSTKKQASV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: PSBB_CYACA (Photosystem II CP47 reaction center protein n=1 Tax=Cyanidium caldarium TaxID=2771 RepID=PSBB_CYACA)

HSP 1 Score: 958 bits (2477), Expect = 0.000e+0
Identity = 447/513 (87.13%), Postives = 483/513 (94.15%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            MALPWYRVHTVVLNDPGRLISVHLMHTALV+G    WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFM R+GVTDSWGGWS+TGESVSNPGLWSFEGVA+THIVLSG+LFLASIWHWVYWDL+LFRDPRT EPALDLPK+FGIHL+LSSLLCFGFGAFH TGLFGPGIWISD YG+TG++Q +APAWGP+GFNPFNP G+ASHHIAAGTVGILAG+FHL VRPPQRLYRALRMGNIETVLSSSI+AVFF++FV  GTMWYG+A+TPIELFGPTRYQWDSGYFQQEIE+RVE SL+ G +  EAWS IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHP+FQDKEG EL VRRMPAFFE FP+ILVDKDGIIRADIPFRRAESKYSIEQVGVT +FYGGKLN +SF DA +VKKYARKAQ GEVFEFDRT L+SDGVFRSSPRGWFTFGHANFAL+FFFGHLWHGSRT+FRDVFAGIGAEVTEQVEFG FQK+GD+++KKQG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVSG----WAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDLDLFRDPRTLEPALDLPKVFGIHLVLSSLLCFGFGAFHVTGLFGPGIWISDAYGLTGRIQSVAPAWGPEGFNPFNPGGIASHHIAAGTVGILAGVFHLNVRPPQRLYRALRMGNIETVLSSSIAAVFFASFVVSGTMWYGAASTPIELFGPTRYQWDSGYFQQEIEKRVEESLSNGLSLPEAWSNIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGHELIVRRMPAFFENFPIILVDKDGIIRADIPFRRAESKYSIEQVGVTCSFYGGKLNNQSFKDASTVKKYARKAQFGEVFEFDRTILDSDGVFRSSPRGWFTFGHANFALLFFFGHLWHGSRTLFRDVFAGIGAEVTEQVEFGVFQKVGDKTTKKQGYV 509          
BLAST of Gvermi13670.t1 vs. uniprot
Match: A0A7S2V2W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W1_9STRA)

HSP 1 Score: 958 bits (2476), Expect = 0.000e+0
Identity = 443/513 (86.35%), Postives = 483/513 (94.15%), Query Frame = 0
Query:    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGVAITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPSGVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGATPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 513
            MALPWYRVHTVVLNDPGRLI+VHLMHTALVAG    WAGSMALYELA+FDPSDPVLNPMWRQGMFVMPFMTRIG+TDSWGGWS+TG+S SNPGLWS+EGVA+THIVLSG LFLA+IWHWVYWDLELFRDP++G+P LDLPKIFGIHL LS LLCFGFGAFH TGLFGPGIW+SD YG+TGKVQP AP+WGP+GFNPFNP GVA+HH+AAGTVG+LAG FHL VRPPQRLYRAL MGNIETVLSSSI+AVFF+AFVT GTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SL    +  EAWS+IPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIF+D+EGRELTVRRMPAFFETFPVILVD DG++RADIPFRRAESKYSIEQVGV V+FYGGKLNG+SF DAP+VKKYARKAQLGEVFEFD+T+LESDGVFRSSPRGW+TFGHANFAL+FFFGHLWHGSRT+FRDVF GIGAEVTEQVEFG FQKLGD ++++QGAV
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAG----WAGSMALYELAIFDPSDPVLNPMWRQGMFVMPFMTRIGITDSWGGWSITGDSTSNPGLWSYEGVALTHIVLSGTLFLAAIWHWVYWDLELFRDPKSGDPGLDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGLTGKVQPAAPSWGPEGFNPFNPGGVAAHHMAAGTVGVLAGTFHLVVRPPQRLYRALSMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEASLTGNLSENEAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFPVILVDSDGVVRADIPFRRAESKYSIEQVGVNVSFYGGKLNGQSFKDAPTVKKYARKAQLGEVFEFDKTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFTGIGAEVTEQVEFGVFQKLGDDTTRRQGAV 509          
The following BLAST results are available for this feature:
BLAST of Gvermi13670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PSBB_PORPU0.000e+092.59Photosystem II CP47 reaction center protein n=204 ... [more]
A0A1C9CAR4_9FLOR0.000e+091.62Photosystem II CP47 reaction center protein n=16 T... [more]
PSBB_TRICV0.000e+088.30Photosystem II CP47 reaction center protein n=91 T... [more]
PSBB_GUITH0.000e+088.11Photosystem II CP47 reaction center protein n=12 T... [more]
Q4G3C5_EMIHU0.000e+088.30Photosystem II CP47 reaction center protein n=20 T... [more]
A0A1C9CDW4_PORSO0.000e+089.50Photosystem II CP47 reaction center protein n=1 Ta... [more]
B7T1V1_VAULI0.000e+088.30Photosystem II CP47 reaction center protein n=11 T... [more]
Q85FZ5_CYAM10.000e+087.52Photosystem II CP47 reaction center protein n=4 Ta... [more]
PSBB_CYACA0.000e+087.13Photosystem II CP47 reaction center protein n=1 Ta... [more]
A0A7S2V2W1_9STRA0.000e+086.35Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017486Photosystem II CP47 reaction centre proteinTIGRFAMTIGR03039TIGR03039coord: 1..507
e-value: 7.4E-297
score: 982.8
IPR017486Photosystem II CP47 reaction centre proteinHAMAPMF_01495PSII_PsbB_CP47coord: 1..513
score: 61.359108
NoneNo IPR availableGENE3D3.10.680.10Photosystem II CP47 reaction center proteincoord: 276..448
e-value: 4.3E-99
score: 331.1
NoneNo IPR availablePANTHERPTHR33180:SF14PHOTOSYSTEM II CP47 REACTION CENTER PROTEINcoord: 1..509
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 263..513
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 241..262
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..240
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 202..221
IPR000932Photosystem antenna protein-likePFAMPF00421PSIIcoord: 1..504
e-value: 2.6E-260
score: 864.4
IPR000932Photosystem antenna protein-likePANTHERPTHR33180PHOTOSYSTEM II CP43 REACTION CENTER PROTEINcoord: 1..509
IPR036001Photosystem antenna protein-like superfamilySUPERFAMILY161077Photosystem II antenna protein-likecoord: 3..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_59contigScGOVlb_59:58913..60454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13670.t1Gvermi13670.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_59 58913..60454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13670.t1 ID=Gvermi13670.t1|Name=Gvermi13670.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=514bp
MALPWYRVHTVVLNDPGRLISVHLMHTALVAGXXXXWAGSMALYELAVFD
PSDPVLNPMWRQGMFVMPFMTRIGVTDSWGGWSVTGESVSNPGLWSFEGV
AITHIVLSGMLFLASIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLS
SLLCFGFGAFHTTGLFGPGIWISDGYGITGKVQPIAPAWGPDGFNPFNPS
GVASHHIAAGTVGILAGLFHLTVRPPQRLYRALRMGNIETVLSSSISAVF
FSAFVTCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGA
TPEEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIF
QDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVG
VTVNFYGGKLNGKSFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSS
PRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQ
KLGDRSSKKQGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017486PSII_PsbB
IPR000932PS_antenna-like
IPR036001PS_II_antenna-like_sf