Gvermi13662.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi13662.t1
Unique Name	Gvermi13662.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	613

Homology

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MH56_MELHR (Phycobiliprotein ApcE n=1 Tax=Melanothamnus harveyi TaxID=397005 RepID=A0A1Z1MH56_MELHR)

HSP 1 Score: 871 bits (2250), Expect = 1.650e-309
Identity = 449/458 (98.03%), Postives = 453/458 (98.91%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKS 458
            MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQ+YVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPN   +V + +KS
Sbjct:   16 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQSYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPN--SKVGLKSKS 471

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MBJ6_9FLOR (Phycobiliprotein ApcE n=1 Tax=Polysiphonia elongata TaxID=159753 RepID=A0A1Z1MBJ6_9FLOR)

HSP 1 Score: 735 bits (1897), Expect = 6.400e-256
Identity = 363/447 (81.21%), Postives = 414/447 (92.62%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPN 447
            +YTTASL+SILQAEQQDRFLQL ELNQLV+FF+SG QRI+IA+LIS NADFLV+QAANKIFVGGSPLSYLERPQ SFL+N+L  ++S  QQ  GNSSTNFF+NISSSLFD +ESLPPGFKPISVV YG+DRMKKSLRDLDWFLRYLTY+I+AGDTNILS NIRGLRELIDNACSSAAA+V+LREMRK+CLSLF+EN ++Q LVA+YFN+LINEFE+SKL DKIRKR S DLQGLRLPQVYSKAG SNQRF MK SLS++EKQLVI+ACYRQIFQRDI KAY +NFQDLESQVSTGQLS+KEFIR LGK+ +Y  +F++++V+TRVIEL+FRHFLGRG+SS+EEFQ+YFGI+S+VGI+GL+DSL+NSQEYSDYFGEETVPYLR LGEEPQESRNWGPQLRLFNYSSPFKK PDFLTLFADYK+K+ N H YGL+NDPL +QFGAIFPN
Sbjct:   16 LYTTASLSSILQAEQQDRFLQLSELNQLVSFFTSGSQRIRIAQLISTNADFLVSQAANKIFVGGSPLSYLERPQASFLNNDLPSNNSTSQQLSGNSSTNFFENISSSLFDASESLPPGFKPISVVRYGSDRMKKSLRDLDWFLRYLTYAIIAGDTNILSVNIRGLRELIDNACSSAAAIVSLREMRKSCLSLFNENPEDQNLVAEYFNILINEFEASKLGDKIRKRFSKDLQGLRLPQVYSKAGNSNQRFVMKNSLSTSEKQLVIKACYRQIFQRDIAKAYSLNFQDLESQVSTGQLSIKEFIRLLGKSTVYINQFNKSFVNTRVIELAFRHFLGRGISSIEEFQKYFGIISRVGISGLVDSLLNSQEYSDYFGEETVPYLRDLGEEPQESRNWGPQLRLFNYSSPFKKIPDFLTLFADYKAKVSNQHAYGLSNDPLTIQFGAIFPN 462

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MSW6_9FLOR (Phycobiliprotein ApcE n=1 Tax=Kapraunia schneideri TaxID=717899 RepID=A0A1Z1MSW6_9FLOR)

HSP 1 Score: 733 bits (1892), Expect = 2.800e-255
Identity = 369/447 (82.55%), Postives = 405/447 (90.60%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPN 447
            +YTTASL+SILQAEQQDRFLQLGELNQLVTFF SG+QRI+IA+LIS NADFLVAQAA KIFVGGSP+SYLERPQ SFLD+    + SM QQ  GNSS N F +ISSS+F+ +ESLPPGFKPISVVLYGN+RMKKSLRDLDWFLRYLTYSIVAGDTNILS NIRGLRELIDNACSSAAALVALREMRKACLSLF+ NF +QELVAQYFN+LI+EFE+SKL DKIRKRSS DLQGLRLPQ+YSKAG   QRF MKTS S NEKQLVI+ACYRQIFQRDI KAY INFQDLES+V TGQLS+KEFIRSLGK+  Y+K+F +N+V+TRVIELSFRHFLGRG+ SLEEFQ+ F ILSKVG+NGLIDSL+NSQEYSDYFGEETVPYLR LGEEPQESRNWGPQLRLFNYSSPFKK  DFLTLFA Y++KIPN HPYGL+NDPL LQFGAIFP+
Sbjct:   16 LYTTASLSSILQAEQQDRFLQLGELNQLVTFFGSGNQRIQIAKLISVNADFLVAQAAKKIFVGGSPISYLERPQASFLDDKSITNISMSQQISGNSSVNLFQDISSSVFNASESLPPGFKPISVVLYGNERMKKSLRDLDWFLRYLTYSIVAGDTNILSVNIRGLRELIDNACSSAAALVALREMRKACLSLFNNNFADQELVAQYFNLLISEFEASKLGDKIRKRSSKDLQGLRLPQIYSKAGFLTQRFVMKTSFSRNEKQLVIRACYRQIFQRDIAKAYNINFQDLESKVFTGQLSIKEFIRSLGKSSFYRKQFSENFVNTRVIELSFRHFLGRGIGSLEEFQKSFAILSKVGLNGLIDSLVNSQEYSDYFGEETVPYLRCLGEEPQESRNWGPQLRLFNYSSPFKKTSDFLTLFAQYRAKIPNQHPYGLSNDPLTLQFGAIFPS 462

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MAQ6_9FLOR (Phycobiliprotein ApcE n=1 Tax=Leptosiphonia brodiei TaxID=2608611 RepID=A0A1Z1MAQ6_9FLOR)

HSP 1 Score: 725 bits (1871), Expect = 4.960e-252
Identity = 369/483 (76.40%), Postives = 425/483 (87.99%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKS-IVNADAE---ARYLSPGELDRIKS 479
            +Y TASL+SILQAEQQDRFLQ  ELNQL++FFSSG  RI+IA+LISANADFLV+QAANKIFVGGSPLSYLE+PQ SFL+++ + ++SM QQ +GNSSTNFF+NI SSLFD +ESLPPGFKPISVV YG +RMKKSLRDLDWFLRYLTYSIVAGDTNILS NIRGLRELIDNACSSAA +VALREMRKACLSLF++N  +Q+LVA+YFN LINEFE+SKL DKIRKR   +LQGLRLPQ+YSKAGISNQRF +KTSLSS+EKQ+VI+ACYRQ+FQRDI KAY I FQDLESQV TG+LS+KEFIR LGK+ +Y  +F+Q++V+TRV+ELSFRHFLGRG SSLEEFQ+YFGI+SK+GI GLIDSLINSQEYSDYFGEETVPYLR LGEEPQES+NWGPQLRLFNYSSPFKKDPDFLTLFADYKSK+ N HPYGL+NDPL +QFGAIFP+ +  + + +KS  V  D      RY  PG  ++I S
Sbjct:   16 LYITASLSSILQAEQQDRFLQSSELNQLMSFFSSGTNRIQIAQLISANADFLVSQAANKIFVGGSPLSYLEKPQASFLNDDFASNTSMSQQVLGNSSTNFFENIFSSLFDASESLPPGFKPISVVRYGPERMKKSLRDLDWFLRYLTYSIVAGDTNILSVNIRGLRELIDNACSSAAVIVALREMRKACLSLFTQNVDDQDLVAEYFNTLINEFEASKLGDKIRKRDFKNLQGLRLPQIYSKAGISNQRFVLKTSLSSSEKQVVIKACYRQVFQRDISKAYSIRFQDLESQVMTGKLSIKEFIRLLGKSNVYINQFNQSFVNTRVVELSFRHFLGRGPSSLEEFQKYFGIISKLGIKGLIDSLINSQEYSDYFGEETVPYLRVLGEEPQESKNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKLSNQHPYGLSNDPLSIQFGAIFPSNI--IGLNSKSSFVTRDTRRILVRY-GPGIYNQISS 495

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A8E6L5T1_9FLOR (Phycobilisome linker polypeptide n=1 Tax=Erythrocystis saccata TaxID=2822695 RepID=A0A8E6L5T1_9FLOR)

HSP 1 Score: 723 bits (1867), Expect = 2.200e-251
Identity = 354/447 (79.19%), Postives = 406/447 (90.83%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPN 447
            +YTTASL+SILQAEQQDRFLQL ELNQLV+FFSSG++R++IA+LIS+NADFLVAQAANKIFVGGSPLSYLERPQ SFL+++   S  + Q+  GNSSTN F+NISSSLFD +ESLPPGFKPISV  YG DRMKKSLRDLDWFLRYLTYSIVAGDTNILS NIRGLRELIDNACSSAA +VALREMRK CLSLF+E+ ++Q+LVA+YFN+LINEFE+SKL DKIRKR S D QGLR+PQ+Y+ AG SNQRF MK SLSSNEKQLVI+ACYRQIFQRDI KAY +NF+DLESQV TGQLS+KEF+R +GK+  Y  +FHQN+V+TRV+ELSFRHFLGRG+SSLEEFQ+YFGI+S++GINGL+DSL+NSQEYSDYFGEETVPYLR LGEEPQES+NWGPQLRLFNYSSPFKK  DFLTLFADYK+K+ N HPYG++NDP P+QFGAIFPN
Sbjct:   16 LYTTASLSSILQAEQQDRFLQLSELNQLVSFFSSGNKRLQIAQLISSNADFLVAQAANKIFVGGSPLSYLERPQASFLNDDFKNSIPLSQKISGNSSTNLFENISSSLFDASESLPPGFKPISVTRYGPDRMKKSLRDLDWFLRYLTYSIVAGDTNILSVNIRGLRELIDNACSSAAVIVALREMRKFCLSLFTESLEDQDLVAEYFNILINEFEASKLGDKIRKRYSKDSQGLRIPQIYTNAGFSNQRFVMKASLSSNEKQLVIKACYRQIFQRDIAKAYSVNFKDLESQVITGQLSIKEFVRLIGKSKFYIDQFHQNFVNTRVVELSFRHFLGRGISSLEEFQKYFGIISRLGINGLVDSLVNSQEYSDYFGEETVPYLRFLGEEPQESKNWGPQLRLFNYSSPFKKTSDFLTLFADYKTKLSNQHPYGISNDPYPIQFGAIFPN 462

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MEU1_9FLOR (Phycobiliprotein ApcE n=1 Tax=Polysiphonia infestans TaxID=2006978 RepID=A0A1Z1MEU1_9FLOR)

HSP 1 Score: 717 bits (1852), Expect = 2.340e-249
Identity = 361/446 (80.94%), Postives = 399/446 (89.46%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFP 446
            +YTTAS +SILQAEQQDRFLQL EL+QLV+FF SG  RIKIA+LISANADFLV+QAANKIFVGGSPLSYL+RPQ +FL ++++      Q  +GNSST FFDNISSSLFD +ESLPPGFKPISVV YG+DRMKKSLRDLDWFLRYLTYSI+AGDTNILS NIRGLRELIDNACSSAA LVALREMRKACLSLF +N   Q LVA+YFN LINEFE+SKL DKIRKRSS DLQGLRLPQ+YSKAG S QRF MKTSLS+NEKQLVI+ACYRQIFQRDI KAY INF+ LESQV TGQLS+KEFIR LGK+ +Y  +F++N+V+TRVIELSFRHFLGRGLSSLEEFQRYFGI+SKVG+NGL+DSL+NSQEYSDYFGEETVPYLR LGEEPQES+NWGPQLRLFNYSS  KK PDFLTLF DYKSK+ N HPYGL NDPLP+QFGAIFP
Sbjct:   16 LYTTASFSSILQAEQQDRFLQLSELSQLVSFFISGSSRIKIAQLISANADFLVSQAANKIFVGGSPLSYLQRPQAAFLSDSVNS-----QDMLGNSSTKFFDNISSSLFDASESLPPGFKPISVVRYGSDRMKKSLRDLDWFLRYLTYSIIAGDTNILSVNIRGLRELIDNACSSAAVLVALREMRKACLSLFEDNADNQRLVAKYFNTLINEFEASKLGDKIRKRSSKDLQGLRLPQIYSKAGTSIQRFVMKTSLSNNEKQLVIKACYRQIFQRDIAKAYNINFESLESQVITGQLSIKEFIRFLGKSNVYLDQFNKNFVNTRVIELSFRHFLGRGLSSLEEFQRYFGIISKVGLNGLVDSLVNSQEYSDYFGEETVPYLRGLGEEPQESKNWGPQLRLFNYSSACKKIPDFLTLFLDYKSKLSNQHPYGLTNDPLPIQFGAIFP 456

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MFD4_9FLOR (Phycobiliprotein ApcE n=1 Tax=Vertebrata isogona TaxID=2006944 RepID=A0A1Z1MFD4_9FLOR)

HSP 1 Score: 700 bits (1807), Expect = 1.930e-242
Identity = 362/509 (71.12%), Postives = 428/509 (84.09%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKSIVNADAEARYL---SPGELDRIKSFVLSGQRRLRIAQIL--TDNRELIVKQ 504
            +Y TASL+SILQAEQQDRFL+LGELNQLV+FFSSG++R++IA+LIS+NA+FLV+QAANKIFVGGS +SYLERPQ SFL+ +      M QQ  GN+STNFF+NI+SSLFD  E+LPPGFKPISVV YG +RMKKSLRDLDWFLRYLTY+IVAGDTNILS NIRGLRELIDNACSSAA +VALREMRK+CL+LF+++   Q+LVA+YFN+LI EFESSKL DKIRKR S+DLQGLRLPQVY+KAG SNQRF MK+SLS+ EKQLVI+ACYRQ+F+RDI+KAY + F+DLESQV TGQLSVKEFIR LGK+ IY+ +F+Q +V++RVIELSF+HFLGRG+SSLEEFQ+YF I+S+VGINGLID+LINSQEYSDYFGEETVPYLR LGEE QESRNWGPQLRLFNYS+PFKK PDFLTLFADYKSK+ N HPYGL+NDPL +QFGAIF +   +V + TKS        R L    PG  ++I S  L   R   I   +    N++  +KQ
Sbjct:   16 LYKTASLSSILQAEQQDRFLELGELNQLVSFFSSGNRRLEIAQLISSNANFLVSQAANKIFVGGSTISYLERPQASFLNTDSLSEIPMSQQLSGNASTNFFNNITSSLFDAGETLPPGFKPISVVKYGPERMKKSLRDLDWFLRYLTYAIVAGDTNILSVNIRGLRELIDNACSSAAVIVALREMRKSCLTLFNDDLDNQQLVARYFNILILEFESSKLGDKIRKRQSTDLQGLRLPQVYNKAGASNQRFIMKSSLSNAEKQLVIRACYRQVFERDIKKAYSLTFKDLESQVVTGQLSVKEFIRLLGKSSIYRDQFNQTFVNSRVIELSFKHFLGRGISSLEEFQKYFAIISQVGINGLIDNLINSQEYSDYFGEETVPYLRILGEEAQESRNWGPQLRLFNYSTPFKKIPDFLTLFADYKSKVSNQHPYGLSNDPLTIQFGAIFTDN--KVGLKTKSSFLTRDTRRLLVRYGPGIYNQISSPNLRNIRSNVITPFVFSATNKDFDIKQ 522

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A0B5VQR2_9FLOR (Phycobiliprotein ApcE n=1 Tax=Vertebrata lanosa TaxID=1261582 RepID=A0A0B5VQR2_9FLOR)

HSP 1 Score: 698 bits (1801), Expect = 1.560e-241
Identity = 358/509 (70.33%), Postives = 427/509 (83.89%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKSIVNADAEARYL---SPGELDRIKSFVLSGQRRLRIAQIL--TDNRELIVKQ 504
            +Y TASL+SILQAEQQDRFL+LGELNQLV+FFSSG++R+++A++IS NA++LV+QAANKIFVGGS +SYLERPQ SFL+  +S   S  QQ  GN+STNFF NISSSLFD  E+LPPGFKPISVV YG  RMKKSLRDLDWFLRYLTY+IVAGDTNILS NIRGLRELIDNACSSAA +VALREMRK+C++LF++N   ++LVA+YFN+LI EFESSKL DKIRKR S DLQGLRLPQVY+KAG  NQRF MK+SLS+ EKQLVI+ACYRQ+F+RDI+KAY + F+DLESQV TG+LSVKEFIR LGK+ IYK +F+Q +V++RVIELSF+HFLGRG+SSLEEFQ+YF I+S++GINGL+DSLINSQEYSDYFGEETVPYLR+LGEE QESRNWGPQLRLFNYS+PFKK PDF+TLFADYKSK+PN HPYGL+NDP+ +QFGAIF +    + + TKS        R L    PG  ++I S  L   +   IA  +  T N+ L +KQ
Sbjct:   16 LYKTASLSSILQAEQQDRFLELGELNQLVSFFSSGNRRLEVAQVISNNANYLVSQAANKIFVGGSAISYLERPQASFLNTEISSEISTSQQLSGNASTNFFSNISSSLFDAGEALPPGFKPISVVKYGPGRMKKSLRDLDWFLRYLTYAIVAGDTNILSVNIRGLRELIDNACSSAAVIVALREMRKSCVTLFNDNLDNKQLVAKYFNILIIEFESSKLGDKIRKRQSKDLQGLRLPQVYNKAGSPNQRFIMKSSLSNAEKQLVIRACYRQVFERDIKKAYSLAFKDLESQVITGKLSVKEFIRLLGKSSIYKGQFNQTFVNSRVIELSFKHFLGRGISSLEEFQKYFSIISQIGINGLVDSLINSQEYSDYFGEETVPYLRTLGEEAQESRNWGPQLRLFNYSTPFKKIPDFITLFADYKSKVPNQHPYGLSNDPINIQFGAIFIDNT--IGLKTKSSFLTRDTRRLLVRYGPGIYNQISSPNLRNVKPNVIAPFIFSTKNKNLNIKQ 522

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BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1MJ74_9FLOR (Phycobiliprotein ApcE n=1 Tax=Vertebrata australis TaxID=2006943 RepID=A0A1Z1MJ74_9FLOR)

HSP 1 Score: 690 bits (1780), Expect = 2.180e-238
Identity = 351/482 (72.82%), Postives = 412/482 (85.48%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKSIVNADAEARYL---SPGELDRIKS 479
            +Y TASL+SILQAEQQDRFL LGELNQLV+FFSSG+ R++IA+LIS+NA+FLV+QAANKIFVGGS LSYLERPQ SFL+ N+S    M QQ  GN+STNF +NISSSLFD  E+LPPGFKPISVV YG +RMKKSLRDLDWFLRYLTY+IVAGDTNILS NIRGLRELIDNACSSAA +VALREMRK CL+LF +N   ++LVA+YFN+LI EFESSKL DKIRKR S DLQGLRLPQ+Y+KAG  +QRF MKTSLS+ EK++VI+A YRQ+F+RDI+KAY + F+DLESQV TGQ+SVKEFIR LGK+ IY+ +F+QN+V++RVIELSF+HFLGRG+ SLEEFQ+YF ++S++GINGL+DSLINSQEYSDYFGEETVPYLR+LGEE QESRNWGPQLRLFNYS+PFKK PDFLTLFADYKSK+ N HPYGL+NDPL +QFGAIF +    V + TKS        R L    PG  ++I S
Sbjct:   16 LYKTASLSSILQAEQQDRFLDLGELNQLVSFFSSGNIRLEIAQLISSNANFLVSQAANKIFVGGSTLSYLERPQASFLNTNISDEVPMSQQLSGNASTNFLNNISSSLFDAGETLPPGFKPISVVKYGPERMKKSLRDLDWFLRYLTYAIVAGDTNILSVNIRGLRELIDNACSSAAVIVALREMRKLCLTLFEDNLSNKQLVAKYFNILILEFESSKLGDKIRKRQSKDLQGLRLPQIYNKAGAFSQRFIMKTSLSNAEKEIVIRASYRQVFERDIKKAYSLTFKDLESQVVTGQISVKEFIRLLGKSSIYRDQFNQNFVNSRVIELSFKHFLGRGIGSLEEFQKYFSVVSQLGINGLVDSLINSQEYSDYFGEETVPYLRTLGEEAQESRNWGPQLRLFNYSTPFKKVPDFLTLFADYKSKVSNQHPYGLSNDPLSIQFGAIFIDNT--VGLKTKSSFLTRDTRRLLVRYGPGIYNQISS 495

[Close]

BLAST of Gvermi13662.t1 vs. uniprot
Match: A0A1Z1M8S4_9FLOR (Phycobiliprotein ApcE n=1 Tax=Polysiphonia sertularioides TaxID=945028 RepID=A0A1Z1M8S4_9FLOR)

HSP 1 Score: 687 bits (1772), Expect = 4.020e-237
Identity = 341/458 (74.45%), Postives = 403/458 (87.99%), Query Frame = 0

Query:    1 MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANADFLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNFFDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSIVAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRFTMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVKEFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGILSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRLFNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLERVSIVTKS 458
            +YTTASL+SI+QAEQQDRFLQLGEL+QL  FFSSG++R+++AELISANADFL++QAA+KIFVGGS +SYLERPQ SFLDN++   +  +Q   G++STNF +N+SSSLFD+ ESLPPGFKPI+VV YG++RMKKSLRDLDWFLRYLTYSI+AGDTNILS NIRGLRELIDNACSSAAA+VALREMRKAC+SLF++N   Q+LVA YFN+LI+EFES+KL DKI KRS  DLQGLRLPQ+YSKAG   Q+F MK+SLS++EKQ+VI++CYRQIFQRDI KAY + F DLESQ+  GQLS+KEFIR LGK+ +Y  +F Q +VDTRV+ELSFR+FLGRGLSSLEEFQ++F I+SK GI+GL+D LINSQEYSDYFGEETVPYLRSLGEE Q+SRNWGPQLRLFNYSSPFKK PDFLTLFADYKSK+ N HPYGL+NDPL +QFGAIF +    V + TKS
Sbjct:   16 LYTTASLSSIMQAEQQDRFLQLGELSQLTAFFSSGNRRLEVAELISANADFLISQAASKIFVGGSTISYLERPQASFLDNDIIDKNLNIQSISGSASTNFLENVSSSLFDSGESLPPGFKPINVVKYGSNRMKKSLRDLDWFLRYLTYSIIAGDTNILSVNIRGLRELIDNACSSAAAIVALREMRKACISLFNDNLDSQKLVADYFNILISEFESAKLGDKIYKRSFKDLQGLRLPQIYSKAGTFTQKFVMKSSLSNSEKQMVIRSCYRQIFQRDIAKAYSLKFTDLESQLVIGQLSIKEFIRYLGKSSVYINQFSQGFVDTRVVELSFRNFLGRGLSSLEEFQKHFDIISKTGISGLVDVLINSQEYSDYFGEETVPYLRSLGEEAQQSRNWGPQLRLFNYSSPFKKVPDFLTLFADYKSKLTNQHPYGLSNDPLSIQFGAIFTSN--SVGLKTKS 471

The following BLAST results are available for this feature:

BLAST of Gvermi13662.t1 vs. uniprot

BLAST of Gvermi13662.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1Z1MH56_MELHR	1.650e-309	98.03	Phycobiliprotein ApcE n=1 Tax=Melanothamnus harvey...	[more]
A0A1Z1MBJ6_9FLOR	6.400e-256	81.21	Phycobiliprotein ApcE n=1 Tax=Polysiphonia elongat...	[more]
A0A1Z1MSW6_9FLOR	2.800e-255	82.55	Phycobiliprotein ApcE n=1 Tax=Kapraunia schneideri...	[more]
A0A1Z1MAQ6_9FLOR	4.960e-252	76.40	Phycobiliprotein ApcE n=1 Tax=Leptosiphonia brodie...	[more]
A0A8E6L5T1_9FLOR	2.200e-251	79.19	Phycobilisome linker polypeptide n=1 Tax=Erythrocy...	[more]
A0A1Z1MEU1_9FLOR	2.340e-249	80.94	Phycobiliprotein ApcE n=1 Tax=Polysiphonia infesta...	[more]
A0A1Z1MFD4_9FLOR	1.930e-242	71.12	Phycobiliprotein ApcE n=1 Tax=Vertebrata isogona T...	[more]
A0A0B5VQR2_9FLOR	1.560e-241	70.33	Phycobiliprotein ApcE n=1 Tax=Vertebrata lanosa Ta...	[more]
A0A1Z1MJ74_9FLOR	2.180e-238	72.82	Phycobiliprotein ApcE n=1 Tax=Vertebrata australis...	[more]
A0A1Z1M8S4_9FLOR	4.020e-237	74.45	Phycobiliprotein ApcE n=1 Tax=Polysiphonia sertula...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038719	Phycobilisome, alpha/beta subunit superfamily	GENE3D	1.10.490.20	Phycocyanins	coord: 452..612 e-value: 4.4E-56 score: 191.3
IPR038719	Phycobilisome, alpha/beta subunit superfamily	GENE3D	1.10.490.20	Phycocyanins	coord: 5..222 e-value: 2.3E-53 score: 182.2
IPR012128	Phycobilisome, alpha/beta subunit	PFAM	PF00502	Phycobilisome	coord: 126..213 e-value: 2.8E-15 score: 56.6 coord: 9..61 e-value: 1.4E-8 score: 34.9 coord: 458..611 e-value: 1.3E-55 score: 187.6
IPR001297	Phycobilisome linker domain	PFAM	PF00427	PBS_linker_poly	coord: 257..382 e-value: 1.4E-39 score: 135.0
IPR001297	Phycobilisome linker domain	PROSITE	PS51445	PBS_LINKER	coord: 230..410 score: 26.205044
IPR038255	Phycobilisome linker domain superfamily	GENE3D	1.10.3130.20	Phycobilisome linker domain	coord: 248..394 e-value: 3.0E-41 score: 142.3
None	No IPR available	PANTHER	PTHR34011:SF6	PHYCOBILIPROTEIN APCE	coord: 2..379
None	No IPR available	PANTHER	PTHR34011	PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED	coord: 2..379
None	No IPR available	PANTHER	PTHR34011:SF6	PHYCOBILIPROTEIN APCE	coord: 455..502
None	No IPR available	PANTHER	PTHR34011	PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED	coord: 455..502
None	No IPR available	CDD	cd12125	APC_alpha	coord: 453..611 e-value: 2.75309E-93 score: 281.864
IPR009050	Globin-like superfamily	SUPERFAMILY	46458	Globin-like	coord: 453..611
IPR009050	Globin-like superfamily	SUPERFAMILY	46458	Globin-like	coord: 2..214

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_59	contig	ScGOVlb_59:14811..18104 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi13662.t1	Gvermi13662.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_59 14811..18104 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi13662.t1 ID=Gvermi13662.t1|Name=Gvermi13662.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=613bp
MYTTASLTSILQAEQQDRFLQLGELNQLVTFFSSGDQRIKIAELISANAD
FLVAQAANKIFVGGSPLSYLERPQVSFLDNNLSMSSSMLQQAVGNSSTNF
FDNISSSLFDTAESLPPGFKPISVVLYGNDRMKKSLRDLDWFLRYLTYSI
VAGDTNILSTNIRGLRELIDNACSSAAALVALREMRKACLSLFSENFQEQ
ELVAQYFNVLINEFESSKLSDKIRKRSSSDLQGLRLPQVYSKAGISNQRF
TMKTSLSSNEKQLVIQACYRQIFQRDIRKAYGINFQDLESQVSTGQLSVK
EFIRSLGKTVIYKKEFHQNYVDTRVIELSFRHFLGRGLSSLEEFQRYFGI
LSKVGINGLIDSLINSQEYSDYFGEETVPYLRSLGEEPQESRNWGPQLRL
FNYSSPFKKDPDFLTLFADYKSKIPNLHPYGLNNDPLPLQFGAIFPNRLE
RVSIVTKSIVNADAEARYLSPGELDRIKSFVLSGQRRLRIAQILTDNREL
IVKQGGQQLFQKRTDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAG
DVTPIEEIGLVGVKEMYNSLGTPISGVAEGVRCMKNVACSLLSGEDSAEA
GFYFDYTLGAMQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038719	Phycobilisome_asu/bsu_sf
IPR012128	Phycobilisome_asu/bsu
IPR001297	PBS_linker_dom
IPR038255	PBS_linker_sf
IPR009050	Globin-like_sf