Gvermi13660.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13660.t1
Unique NameGvermi13660.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length164
Homology
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MGX1_MELHR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Melanothamnus harveyi TaxID=397005 RepID=A0A1Z1MGX1_MELHR)

HSP 1 Score: 323 bits (829), Expect = 3.320e-109
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED
Sbjct:  188 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A0B5VUT5_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=4 Tax=Vertebrata TaxID=1261581 RepID=A0A0B5VUT5_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 1.000e-93
Identity = 138/163 (84.66%), Postives = 153/163 (93.87%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLP+IFVVENNQWAIGMAHHRSTS PEI++KA+VFGLPGFEVDGMDVLAVREVAQKAI+RARSG+GPTLIEALTYRFRGHSLADPDELRSRKEK+AWLVRDPIKN+K Y+L + L + N+L  IE KVK NIEEAVNFALSSPEP++K+LKKYLFVED
Sbjct:  188 MAVLWKLPVIFVVENNQWAIGMAHHRSTSYPEIHQKAEVFGLPGFEVDGMDVLAVREVAQKAIIRARSGNGPTLIEALTYRFRGHSLADPDELRSRKEKDAWLVRDPIKNLKSYILENSLTEINILNDIEVKVKKNIEEAVNFALSSPEPDIKELKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MEI0_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Polysiphonia infestans TaxID=2006978 RepID=A0A1Z1MEI0_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 1.330e-91
Identity = 137/163 (84.05%), Postives = 151/163 (92.64%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPIIFVVENNQWAIGMAHHRSTS PEI+KKAQVFGLPGFEVDGMDVLAVR+VA+KAI+RAR G+GPTLIE LTYRFRGHSLADPDELRSR+EK AWLVRDPIKNIK Y++NS LV  +VL++IE KVK NIE +VNFALSSPEP+VK+LKKYLF ED
Sbjct:  188 MAVLWKLPIIFVVENNQWAIGMAHHRSTSLPEIHKKAQVFGLPGFEVDGMDVLAVRQVAEKAIIRARLGNGPTLIETLTYRFRGHSLADPDELRSRQEKNAWLVRDPIKNIKQYIINSSLVSSDVLKNIEIKVKKNIENSVNFALSSPEPDVKELKKYLFAED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MVD8_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Tolypiocladia glomerulata TaxID=860646 RepID=A0A1Z1MVD8_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 2.760e-91
Identity = 132/162 (81.48%), Postives = 153/162 (94.44%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVE 162
            M+VLWKLP+IFVVENNQWAIGMAHHRSTSSPEIY+KA+VFGLPG+EVDGMDVLAVR++AQKAI RARSGDGPTLIEALTYRFRGHSLADPDELRSR+EK AWLVRDPI+N+K+Y+L + L D +VL+++E KVK NIE++VNFALSSPEPN+KDLKKYLF +
Sbjct:  188 MSVLWKLPVIFVVENNQWAIGMAHHRSTSSPEIYQKAKVFGLPGYEVDGMDVLAVRKIAQKAIDRARSGDGPTLIEALTYRFRGHSLADPDELRSRQEKNAWLVRDPIRNLKNYILKNSLTDSDVLKTVEVKVKKNIEDSVNFALSSPEPNIKDLKKYLFTD 349          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MBM4_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Polysiphonia elongata TaxID=159753 RepID=A0A1Z1MBM4_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 6.190e-90
Identity = 134/163 (82.21%), Postives = 153/163 (93.87%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPIIFVVENNQWAIGMAHHR+TSSPEI+KKA VFGLPGFEVDGMDVLAVR+V++KAI RAR G GPTLIE LTYRFRGHSLADPDELRSRKEK+AWLVRDPIKNIK YML+S +VD +VL++IE KVK +I+++V+FALSSPEP++K+LKKYLFVED
Sbjct:  188 MAVLWKLPIIFVVENNQWAIGMAHHRATSSPEIHKKAAVFGLPGFEVDGMDVLAVRQVSEKAITRARLGHGPTLIETLTYRFRGHSLADPDELRSRKEKDAWLVRDPIKNIKQYMLDSSIVDISVLKNIEKKVKKDIDDSVSFALSSPEPDIKELKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MSJ9_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Kapraunia schneideri TaxID=717899 RepID=A0A1Z1MSJ9_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 6.190e-90
Identity = 137/163 (84.05%), Postives = 149/163 (91.41%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPIIFVVENNQWAIGMAHHRSTS PEIYKKAQVFGLPGFEVDGMDVLAVR+VAQ AI RAR G GPTLIEALTYRFRGHSLADPDELRS KEK+AWLVRDPIKN+K Y+L+S L + + L +IETKVKN I+ +VNFALSSPEPN+K+LKKYLFVED
Sbjct:  188 MAVLWKLPIIFVVENNQWAIGMAHHRSTSYPEIYKKAQVFGLPGFEVDGMDVLAVRDVAQDAISRARLGHGPTLIEALTYRFRGHSLADPDELRSVKEKDAWLVRDPIKNLKHYILDSSLANLDTLNTIETKVKNCIKNSVNFALSSPEPNIKELKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1M9C6_RHOCN (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Rhodomela confervoides TaxID=35163 RepID=A0A1Z1M9C6_RHOCN)

HSP 1 Score: 274 bits (701), Expect = 8.780e-90
Identity = 133/163 (81.60%), Postives = 152/163 (93.25%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            M+VLWKLPIIFVVENNQWAIGMAHHRSTSSPEI+KKAQ FGLPG EVDGMDVLAVR+VA+KAI RAR+G+GPTLIEALTYRFRGHSLADPDELRSR EK AWL RDPIKN K +++++KLV  ++L++IE KVKNNI+EAVNFALSSPEP+VK+LK+YLFVED
Sbjct:  188 MSVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIHKKAQAFGLPGIEVDGMDVLAVRDVAEKAIARARAGEGPTLIEALTYRFRGHSLADPDELRSRDEKNAWLARDPIKNFKKHIIDNKLVSLDILKNIELKVKNNIDEAVNFALSSPEPDVKELKRYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MAS7_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Leptosiphonia brodiei TaxID=2608611 RepID=A0A1Z1MAS7_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 1.760e-89
Identity = 133/163 (81.60%), Postives = 150/163 (92.02%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPI+FVVENNQWAIGMAHHRSTSSPEI+KKAQVFGLPGFEVDGMDVLAVR+VA++AI RAR G GPTLIEALTYRFRGHSLADPDELRSRKEK+AWLVRDPIKNIK Y++   + D +VL+ IE KVK ++E +VNFALSSPEP++K+LKKYLFVED
Sbjct:  188 MAVLWKLPILFVVENNQWAIGMAHHRSTSSPEIHKKAQVFGLPGFEVDGMDVLAVRQVAEQAISRARLGHGPTLIEALTYRFRGHSLADPDELRSRKEKDAWLVRDPIKNIKQYIIELSIADVSVLKDIEIKVKKDVENSVNFALSSPEPDIKELKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A8E6NXF2_9FLOR (Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Erythrocystis saccata TaxID=2822695 RepID=A0A8E6NXF2_9FLOR)

HSP 1 Score: 270 bits (691), Expect = 2.880e-88
Identity = 132/163 (80.98%), Postives = 148/163 (90.80%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MAVLWKLPI+FVVENNQWAIGMAHHRSTSSPEI+KKAQVFGLPGFEVDGMDVLAVR VA KAI RAR G GPTLIE LTYRFRGHSLADPDELRS+KEKEAWL+RDPIKNIK+Y+LN   +D +VL++IE KVK  I+ +V+FALSSPEP++ +LKKYLFVED
Sbjct:  188 MAVLWKLPILFVVENNQWAIGMAHHRSTSSPEIHKKAQVFGLPGFEVDGMDVLAVRAVADKAITRARLGYGPTLIETLTYRFRGHSLADPDELRSKKEKEAWLIRDPIKNIKEYILNFSTIDSSVLKTIEIKVKKTIKNSVDFALSSPEPDINELKKYLFVED 350          
BLAST of Gvermi13660.t1 vs. uniprot
Match: A0A1Z1MGH3_9FLOR (Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Polysiphonia sertularioides TaxID=945028 RepID=A0A1Z1MGH3_9FLOR)

HSP 1 Score: 270 bits (689), Expect = 5.780e-88
Identity = 132/163 (80.98%), Postives = 150/163 (92.02%), Query Frame = 0
Query:    1 MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGMDVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEPNVKDLKKYLFVED 163
            MA LWKLP+IFVVENNQWAIGMAHHRSTSSPEI+KKA+ FGLPG EVDGMDVLAVR+VA KAI RARSG+GPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKN+K+Y+LN K+V+ +VL +IE +VK  I+ +V FALSSPEP+VKD+KKYLFVE+
Sbjct:  188 MAALWKLPVIFVVENNQWAIGMAHHRSTSSPEIHKKAEAFGLPGIEVDGMDVLAVRKVALKAISRARSGEGPTLIEALTYRFRGHSLADPDELRSRKEKEAWLVRDPIKNLKNYILNKKVVNSDVLDAIEKRVKILIQNSVEFALSSPEPSVKDIKKYLFVEE 350          
The following BLAST results are available for this feature:
BLAST of Gvermi13660.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z1MGX1_MELHR3.320e-109100.00Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A0B5VUT5_9FLOR1.000e-9384.66Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1MEI0_9FLOR1.330e-9184.05Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1MVD8_9FLOR2.760e-9181.48Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1MBM4_9FLOR6.190e-9082.21Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1MSJ9_9FLOR6.190e-9084.05Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1M9C6_RHOCN8.780e-9081.60Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A1Z1MAS7_9FLOR1.760e-8981.60Pyruvate dehydrogenase E1 component subunit alpha ... [more]
A0A8E6NXF2_9FLOR2.880e-8880.98Pyruvate dehydrogenase E1 component alpha subunit ... [more]
A0A1Z1MGH3_9FLOR5.780e-8880.98Pyruvate dehydrogenase E1 component subunit alpha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 1..152
e-value: 2.9E-47
score: 161.1
NoneNo IPR availableGENE3D3.40.50.970coord: 1..163
e-value: 4.0E-55
score: 189.3
NoneNo IPR availablePANTHERPTHR11516PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLARcoord: 1..162
NoneNo IPR availablePANTHERPTHR11516:SF60PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHAcoord: 1..162
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_59contigScGOVlb_59:11279..11770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13660.t1Gvermi13660.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_59 11279..11770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13660.t1 ID=Gvermi13660.t1|Name=Gvermi13660.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=164bp
MAVLWKLPIIFVVENNQWAIGMAHHRSTSSPEIYKKAQVFGLPGFEVDGM
DVLAVREVAQKAILRARSGDGPTLIEALTYRFRGHSLADPDELRSRKEKE
AWLVRDPIKNIKDYMLNSKLVDKNVLQSIETKVKNNIEEAVNFALSSPEP
NVKDLKKYLFVED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR029061THDP-binding