Gvermi13201.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13201.t1
Unique NameGvermi13201.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length116
Homology
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A7Y2BKV8_9DELT (IS3 family transposase (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2BKV8_9DELT)

HSP 1 Score: 152 bits (384), Expect = 5.630e-44
Identity = 74/99 (74.75%), Postives = 85/99 (85.86%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            MVDFI++HRDE+GVEPIC VLPIAPSTY  HRA RL+PE   ARAKRDE L V++RRV +ESLGGVYG +KVW QLLREG+ VARCTV RLMR+MGL+G
Sbjct:    1 MVDFIDKHRDEYGVEPICAVLPIAPSTYYAHRACRLDPERRCARAKRDEALCVEVRRVHQESLGGVYGVKKVWRQLLREGIRVARCTVRRLMRQMGLRG 99          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A2Z6ACE9_9SPHN (HTH_21 domain-containing protein n=1 Tax=Sphingobium sp. YG1 TaxID=2082188 RepID=A0A2Z6ACE9_9SPHN)

HSP 1 Score: 139 bits (349), Expect = 2.350e-40
Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ FI+EHRD +GVEPICRVLPIAPSTY E  AKR +P L SARA+RDEEL+ ++ RV+ E+ G VYG RKVW Q+ REG DVARCTV+RLMR +GLQG
Sbjct:    1 MIAFIDEHRDAYGVEPICRVLPIAPSTYHERLAKRRDPALQSARARRDEELKPEVLRVFAENFG-VYGVRKVWRQMKREGFDVARCTVQRLMRDLGLQG 98          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A1H9VLH2_9SPHN (HTH-like domain-containing protein n=1 Tax=Sphingobium sp. YR768 TaxID=1884365 RepID=A0A1H9VLH2_9SPHN)

HSP 1 Score: 137 bits (346), Expect = 1.060e-39
Identity = 67/99 (67.68%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ FI+EHRD +GVEPICRVLPIAPSTY E  AKR +P L SARA++DEEL+ ++ RV+ E+ G VYG RKVW Q+ REG DVARCTV+RLMR +GLQG
Sbjct:    1 MIAFIDEHRDAYGVEPICRVLPIAPSTYHERLAKRRDPALQSARARKDEELKPEVLRVFAENFG-VYGVRKVWRQMKREGFDVARCTVQRLMRDLGLQG 98          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A0Q7V546_9HYPH (Transposase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A0Q7V546_9HYPH)

HSP 1 Score: 141 bits (355), Expect = 5.140e-39
Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ FI++HR+ HGVEPIC+VLPIAPSTY +H AKR++P   SARAKRDEEL V++RRV+EE+   VYG RKVW QL REG DVARCTV RLM+ MGL+G
Sbjct:    1 MIAFIDDHREAHGVEPICKVLPIAPSTYHDHVAKRIDPSRLSARAKRDEELRVEVRRVFEENFR-VYGVRKVWRQLQREGFDVARCTVARLMKAMGLEG 98          
BLAST of Gvermi13201.t1 vs. uniprot
Match: UPI001BC351AA (Hypothetical protein n=1 Tax=Acidocella sp. C78 TaxID=1671486 RepID=UPI001BC351AA)

HSP 1 Score: 136 bits (342), Expect = 1.230e-38
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ FI++HR  +GVEPICRVLPIAPSTY EH AKR  PE  S RA+RDE LE DIRRV+ E+   VYGARKVW QL REG  VARCTVERLMR +GLQG
Sbjct:    1 MISFIDDHRGAYGVEPICRVLPIAPSTYYEHVAKRANPERRSERARRDEALEADIRRVFAENFE-VYGARKVWRQLQREGCAVARCTVERLMRIIGLQG 98          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A158DJG6_9BURK (Integrase catalytic region n=1 Tax=Caballeronia temeraria TaxID=1777137 RepID=A0A158DJG6_9BURK)

HSP 1 Score: 134 bits (338), Expect = 1.750e-38
Identity = 68/111 (61.26%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQGACVQGYDHRGRR 111
            M+ FI+EHRD +G+EPICR+LPIAPSTY  H  +R +PE   ARA+RD EL+  IR VW+E+ G VYG RKVW QLLR+GV VARCTV RLM+ MGL+G        RGRR
Sbjct:    1 MIAFIDEHRDVYGIEPICRLLPIAPSTYHRHAGRRSDPEQWPARARRDAELKALIRAVWDENFG-VYGVRKVWRQLLRDGVKVARCTVARLMKVMGLEGV------RRGRR 104          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A443FIQ2_9HYPH (IS3 family transposase n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A443FIQ2_9HYPH)

HSP 1 Score: 142 bits (357), Expect = 2.430e-38
Identity = 69/100 (69.00%), Postives = 83/100 (83.00%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQGA 100
            M+ FI++HR+ HGVEPIC+VLPIAPSTY +H AKR +P   SARAKRDEEL+V++RRV+EE+   VYG RKVW QL REG DVARC V RLMR+MGL+GA
Sbjct:  109 MIAFIDDHREAHGVEPICKVLPIAPSTYHDHVAKRRDPSRLSARAKRDEELKVEVRRVFEENFR-VYGVRKVWRQLRREGFDVARCAVSRLMRQMGLEGA 207          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A7C5B1K9_9BACT (IS3 family transposase n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7C5B1K9_9BACT)

HSP 1 Score: 141 bits (355), Expect = 4.780e-38
Identity = 67/99 (67.68%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ F+++HR E+G+EPICRVLPIAPSTY EH A+R +PE  SARAKRDE L+++++RV++ + G VYG RKVW QLLREG  VARCTVERLMR MGLQG
Sbjct:  109 MIGFVDDHRKEYGIEPICRVLPIAPSTYHEHEAQRRDPERMSARAKRDEVLKIEVKRVYDANFG-VYGVRKVWWQLLREGFTVARCTVERLMRGMGLQG 206          
BLAST of Gvermi13201.t1 vs. uniprot
Match: X7EBB5_9RHOB (Transposase ISPsy21 n=1 Tax=Roseivivax halodurans JCM 10272 TaxID=1449350 RepID=X7EBB5_9RHOB)

HSP 1 Score: 135 bits (341), Expect = 5.990e-38
Identity = 70/108 (64.81%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQGACVQGYDHR 108
            MV FI+ HR EHGVEPIC VLP+APSTY +H AKR +P   S RA+RDE L  +IRRV+EE+   VYG RKVW QL REG+DVARCTV RLM  MGLQG  ++G  HR
Sbjct:    1 MVSFIDMHRGEHGVEPICNVLPVAPSTYYDHLAKRADPARLSDRARRDEALRPEIRRVFEENWR-VYGVRKVWRQLAREGIDVARCTVARLMSDMGLQGI-IRGKPHR 106          
BLAST of Gvermi13201.t1 vs. uniprot
Match: A0A1Q5SM63_9BRAD (Transposase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A1Q5SM63_9BRAD)

HSP 1 Score: 131 bits (329), Expect = 5.190e-37
Identity = 63/99 (63.64%), Postives = 78/99 (78.79%), Query Frame = 0
Query:    1 MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEELEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQG 99
            M+ FI++HR  HGVEPIC+VLPIAPSTY  H AKR +P   SARA++D  L++++RRV++++   VYG RKVW QL REG DVARCTV RLMR MGLQG
Sbjct:    1 MIAFIDDHRGAHGVEPICKVLPIAPSTYHAHVAKRRDPAKRSARARQDVALKIEVRRVFDQNFS-VYGVRKVWRQLKREGFDVARCTVSRLMRDMGLQG 98          
The following BLAST results are available for this feature:
BLAST of Gvermi13201.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2BKV8_9DELT5.630e-4474.75IS3 family transposase (Fragment) n=1 Tax=Myxococc... [more]
A0A2Z6ACE9_9SPHN2.350e-4068.69HTH_21 domain-containing protein n=1 Tax=Sphingobi... [more]
A0A1H9VLH2_9SPHN1.060e-3967.68HTH-like domain-containing protein n=1 Tax=Sphingo... [more]
A0A0Q7V546_9HYPH5.140e-3968.69Transposase n=6 Tax=Alphaproteobacteria TaxID=2821... [more]
UPI001BC351AA1.230e-3870.71Hypothetical protein n=1 Tax=Acidocella sp. C78 Ta... [more]
A0A158DJG6_9BURK1.750e-3861.26Integrase catalytic region n=1 Tax=Caballeronia te... [more]
A0A443FIQ2_9HYPH2.430e-3869.00IS3 family transposase n=1 Tax=Mesorhizobium sp. T... [more]
A0A7C5B1K9_9BACT4.780e-3867.68IS3 family transposase n=1 Tax=Nitrospirae bacteri... [more]
X7EBB5_9RHOB5.990e-3864.81Transposase ISPsy21 n=1 Tax=Roseivivax halodurans ... [more]
A0A1Q5SM63_9BRAD5.190e-3763.64Transposase n=2 Tax=unclassified Bradyrhizobium Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025948HTH-like domainPFAMPF13276HTH_21coord: 47..103
e-value: 2.2E-18
score: 66.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_4231contigScGOVlb_4231:615..962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13201.t1Gvermi13201.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_4231 615..962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13201.t1 ID=Gvermi13201.t1|Name=Gvermi13201.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=116bp
MVDFIEEHRDEHGVEPICRVLPIAPSTYDEHRAKRLEPELGSARAKRDEE
LEVDIRRVWEESLGGVYGARKVWEQLLREGVDVARCTVERLMRKMGLQGA
CVQGYDHRGRRRGPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025948HTH-like_dom