Gvermi1312.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi1312.t1
Unique NameGvermi1312.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length280
Homology
BLAST of Gvermi1312.t1 vs. uniprot
Match: A0A519CVQ4_9EURY (J domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A519CVQ4_9EURY)

HSP 1 Score: 64.7 bits (156), Expect = 2.140e-9
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  224 KGDAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            + D Y+ LGV + AS +EI RA+R LAK +HPDK D P A + MKRINAAY ++
Sbjct:    6 ESDPYEVLGVKKDASDKEITRAYRRLAKRFHPDKNDDPAAEDRMKRINAAYEKI 59          
BLAST of Gvermi1312.t1 vs. uniprot
Match: A0A7J3G5J0_CALS0 (DUF1294 domain-containing protein n=1 Tax=Caldiarchaeum subterraneum TaxID=311458 RepID=A0A7J3G5J0_CALS0)

HSP 1 Score: 67.8 bits (164), Expect = 2.260e-9
Identity = 32/52 (61.54%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D Y  LGVGR ASQ+EIKRA+R L K +HPD   HP A E MK +N AYR L
Sbjct:    9 DYYSILGVGRNASQEEIKRAYRSLVKKYHPDISSHPHAEEIMKVVNEAYRVL 60          
BLAST of Gvermi1312.t1 vs. uniprot
Match: A0A5C9C3M2_9RHOO (Chaperone protein DnaJ n=3 Tax=Rhodocyclales TaxID=206389 RepID=A0A5C9C3M2_9RHOO)

HSP 1 Score: 67.4 bits (163), Expect = 3.130e-9
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D ++ LGV   A+  E+KRA+R LA  WHPD+ DHP+ATE  K+INAAY +L
Sbjct:    7 DPHEILGVSPGAAPAELKRAYRRLAMRWHPDRSDHPQATERFKQINAAYEQL 58          
BLAST of Gvermi1312.t1 vs. uniprot
Match: E6N6U3_CALS0 (J domain-containing protein n=1 Tax=Caldiarchaeum subterraneum TaxID=311458 RepID=E6N6U3_CALS0)

HSP 1 Score: 67.4 bits (163), Expect = 4.820e-9
Identity = 32/52 (61.54%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D Y  LGVGR ASQ+EIKRA+R L K +HPD   HP A E MK +N AYR L
Sbjct:    9 DYYSILGVGRHASQEEIKRAYRNLVKKYHPDISPHPHAEEIMKIVNEAYRVL 60          
BLAST of Gvermi1312.t1 vs. uniprot
Match: A0A5C7ZR57_9RHOO (Chaperone protein DnaJ n=2 Tax=Rhodocyclales TaxID=206389 RepID=A0A5C7ZR57_9RHOO)

HSP 1 Score: 66.6 bits (161), Expect = 5.790e-9
Identity = 31/52 (59.62%), Postives = 34/52 (65.38%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D Y  LGV   +   E KRAFR LA  WHPD+ DHPEATE  K INAAY +L
Sbjct:    4 DPYAVLGVSPESGPVEWKRAFRRLAMRWHPDRNDHPEATERFKEINAAYEQL 55          
BLAST of Gvermi1312.t1 vs. uniprot
Match: UPI001AEA4099 (molecular chaperone DnaJ n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AEA4099)

HSP 1 Score: 66.6 bits (161), Expect = 6.800e-9
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  223 PKGDAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            P GD Y+TLGV R A ++EIK+A+R LA+ +HPD C  P A E  K+IN AY+ L
Sbjct:    2 PSGDYYETLGVPRNADEKEIKKAYRNLARKYHPDVCKEPGAEEKFKQINEAYQVL 56          
BLAST of Gvermi1312.t1 vs. uniprot
Match: B4LE75_DROVI (DnaJ homolog subfamily C member 16 n=7 Tax=Drosophila TaxID=7215 RepID=B4LE75_DROVI)

HSP 1 Score: 67.0 bits (162), Expect = 7.730e-9
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D YK LGV   ASQQEI+RA+++LAK WHPDK  HPEA     +I  AY  L
Sbjct:   26 DPYKELGVSHTASQQEIRRAYKQLAKEWHPDKSSHPEAERKFVQIKKAYELL 77          
BLAST of Gvermi1312.t1 vs. uniprot
Match: UPI001CF86321 (J domain-containing protein n=1 Tax=Ferribacterium limneticum TaxID=76259 RepID=UPI001CF86321)

HSP 1 Score: 65.5 bits (158), Expect = 1.390e-8
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  228 YKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            ++ LGV   A+  E+KRA+R LA  WHPD+ DHP+ATE  K+INAAY +L
Sbjct:    6 HEILGVSPGAAPAELKRAYRRLAMRWHPDRSDHPQATERFKQINAAYEQL 55          
BLAST of Gvermi1312.t1 vs. uniprot
Match: A0A3L6LXN7_9RHOO (J domain-containing protein n=1 Tax=Rhodocyclales bacterium GT-UBC TaxID=2316108 RepID=A0A3L6LXN7_9RHOO)

HSP 1 Score: 65.5 bits (158), Expect = 1.470e-8
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D Y  L + R AS  E KRA+R LA  WHPD+ DHPEATE  K+I AAY +L
Sbjct:    4 DPYVVLDISRSASPAEWKRAYRRLAMRWHPDRNDHPEATERFKQIRAAYDQL 55          
BLAST of Gvermi1312.t1 vs. uniprot
Match: UPI001A9D94B5 (dnaJ protein homolog 1-like n=1 Tax=Ixodes scapularis TaxID=6945 RepID=UPI001A9D94B5)

HSP 1 Score: 62.0 bits (149), Expect = 1.860e-8
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  226 DAYKTLGVGRLASQQEIKRAFRELAKAWHPDKCDHPEATEAMKRINAAYREL 277
            D YK LGVGR A+Q +IK+A+R+LAK +HPDK   P+A E  K +  AY  L
Sbjct:    4 DFYKILGVGRTATQHDIKKAYRKLAKRYHPDKNKSPDAEEKFKELGKAYEVL 55          
The following BLAST results are available for this feature:
BLAST of Gvermi1312.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A519CVQ4_9EURY2.140e-955.56J domain-containing protein n=1 Tax=Euryarchaeota ... [more]
A0A7J3G5J0_CALS02.260e-961.54DUF1294 domain-containing protein n=1 Tax=Caldiarc... [more]
A0A5C9C3M2_9RHOO3.130e-955.77Chaperone protein DnaJ n=3 Tax=Rhodocyclales TaxID... [more]
E6N6U3_CALS04.820e-961.54J domain-containing protein n=1 Tax=Caldiarchaeum ... [more]
A0A5C7ZR57_9RHOO5.790e-959.62Chaperone protein DnaJ n=2 Tax=Rhodocyclales TaxID... [more]
UPI001AEA40996.800e-954.55molecular chaperone DnaJ n=1 Tax=Methanolinea meso... [more]
B4LE75_DROVI7.730e-957.69DnaJ homolog subfamily C member 16 n=7 Tax=Drosoph... [more]
UPI001CF863211.390e-856.00J domain-containing protein n=1 Tax=Ferribacterium... [more]
A0A3L6LXN7_9RHOO1.470e-857.69J domain-containing protein n=1 Tax=Rhodocyclales ... [more]
UPI001A9D94B51.860e-853.85dnaJ protein homolog 1-like n=1 Tax=Ixodes scapula... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 262..279
score: 29.49
coord: 228..246
score: 49.18
coord: 246..261
score: 40.37
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 225..279
e-value: 4.1E-15
score: 66.2
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 226..277
e-value: 4.1E-16
score: 58.9
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 226..279
score: 13.678316
IPR001623DnaJ domainCDDcd06257DnaJcoord: 226..277
e-value: 5.47854E-19
score: 76.4301
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 196..279
e-value: 9.0E-20
score: 72.4
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 202..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..220
NoneNo IPR availablePANTHERPTHR24074CO-CHAPERONE PROTEIN DJLAcoord: 207..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 110..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availableTMHMMTMhelixcoord: 120..142
NoneNo IPR availableTMHMMTMhelixcoord: 29..47
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 152..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_4738contigScGOVlb_4738:68..907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi1312.t1Gvermi1312.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_4738 68..907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi1312.t1 ID=Gvermi1312.t1|Name=Gvermi1312.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=280bp
MQDTMYLARHVFYQLVQSYMKLSELAKEVYAFLGFCLLLSLALALVISSS
LTTLAIRFPVTYRVFVFLWFVLSAVFKPQFEALMKSVGPVGCLAYWIAFV
CVTVIPIFNRLPSRMAGFIIQELCAFSAPLIPFAFLGWAMWLKSIGKSKP
VGHWMSSILFSLLAMAIQFHFCPDELRDPTHWYGWYLYAFLFGRNADNDA
RKDEAANDEEKETANAASPPFPPKGDAYKTLGVGRLASQQEIKRAFRELA
KAWHPDKCDHPEATEAMKRINAAYRELRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf