Gvermi12917.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12917.t1
Unique NameGvermi12917.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length192
Homology
BLAST of Gvermi12917.t1 vs. uniprot
Match: A0A2V3IR91_9FLOR (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR91_9FLOR)

HSP 1 Score: 193 bits (491), Expect = 2.760e-60
Identity = 93/140 (66.43%), Postives = 105/140 (75.00%), Query Frame = 0
Query:   50 LASLVVVPPVLAEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLAL-DGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSF 188
            +AS  V      +   LP+TE++WR  LT  QF VLR+ GTE PF+S LN EKR GTFCC+GC  P+F S AKF SGTGWPSF+  L   VR +QSL DR+LLRKEVSC RCGGHLGHVFEDGP PTGLRYCINGVALSF
Sbjct:    3 IASTSVFADTFGQGGSLPKTEEEWRQRLTAAQFRVLRQQGTEPPFTSALNDEKRVGTFCCSGCTAPLFPSVAKFNSGTGWPSFTYPLPQRVRAKQSLSDRLLLRKEVSCVRCGGHLGHVFEDGPPPTGLRYCINGVALSF 142          
BLAST of Gvermi12917.t1 vs. uniprot
Match: UPI001E44034E (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Roseomonas sp. CECT 9278 TaxID=2845823 RepID=UPI001E44034E)

HSP 1 Score: 184 bits (467), Expect = 1.110e-56
Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 0
Query:   68 RTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA 191
            RT+ +WRAAL+PE F VLR+ GTERP +SPLN EKR GTF CAGC TP+FD+ AKFESGTGWPSF   +DG    +S     + R EV C RCGGHLGHVF DGPRPTGLRYC+NGV+L+F PA
Sbjct:   17 RTDAEWRAALSPEAFRVLRQHGTERPGTSPLNDEKRPGTFLCAGCATPLFDAGAKFESGTGWPSFFAPIDGAVAEKSDRSFFMTRTEVHCARCGGHLGHVFPDGPRPTGLRYCMNGVSLAFQPA 140          
BLAST of Gvermi12917.t1 vs. uniprot
Match: UPI001BA74DD4 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Roseomonas soli TaxID=1081025 RepID=UPI001BA74DD4)

HSP 1 Score: 183 bits (464), Expect = 3.170e-56
Identity = 83/130 (63.85%), Postives = 100/130 (76.92%), Query Frame = 0
Query:   61 AEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSP 190
            AE   + +TE+ WRAALTPE F VLR+ GTERP +SPLNAEKR+GTF CAGCGTP+FD+A KFESG GWPSF   L+G    Q     ++ R EV C +CGGHLGHVF DGP+PTGLR+C+NGVA+ F+P
Sbjct:   10 AETFPVTKTEEDWRAALTPEAFRVLRQHGTERPGTSPLNAEKRAGTFTCAGCGTPLFDAATKFESGCGWPSFFAPLEGAVATQLDTSHMMRRIEVHCAQCGGHLGHVFPDGPQPTGLRFCMNGVAMGFAP 139          
BLAST of Gvermi12917.t1 vs. uniprot
Match: A0A2G8MQV6_9HYPH (Peptide-methionine (R)-S-oxide reductase n=4 Tax=Methylobacterium TaxID=407 RepID=A0A2G8MQV6_9HYPH)

HSP 1 Score: 182 bits (462), Expect = 5.260e-56
Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 0
Query:   68 RTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSP 190
            RT+ +WR +LTP+Q+ VLRE GTERP +SPLN EKR+GTF CAGCG P+FDSA KFESGTGWPSFS  LDG    Q+     + R EV C RC GHLGHVF+DGP PTGLRYC+NGVA+ F P
Sbjct:   12 RTDAEWRRSLTPQQYRVLREHGTERPGTSPLNHEKRTGTFVCAGCGQPLFDSATKFESGTGWPSFSAPLDGAVETQTDRSFFMTRTEVHCARCKGHLGHVFDDGPAPTGLRYCMNGVAMGFEP 134          
BLAST of Gvermi12917.t1 vs. uniprot
Match: UPI0010BF9039 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI0010BF9039)

HSP 1 Score: 181 bits (460), Expect = 1.280e-55
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 0
Query:   61 AEPRD---LPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA 191
            AEP +   + +T+ +WRAAL+PE F VLR+ GTERP +SPLNAEKR GTF CAGCG P+FD+AAKFESGTGWPSF   ++G    +S     + R EV C RCGGHLGHVF DGP PTGLRYC+NGV+L F PA
Sbjct:    7 AEPEETFPVAKTDAEWRAALSPEAFRVLRQHGTERPGTSPLNAEKRPGTFTCAGCGQPLFDAAAKFESGTGWPSFFAPVEGAVGTRSDRSFFMTRTEVHCARCGGHLGHVFPDGPAPTGLRYCMNGVSLGFDPA 140          
BLAST of Gvermi12917.t1 vs. uniprot
Match: A0A7T2LLE6_9SPHN (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Sphingosinicella flava TaxID=2771430 RepID=A0A7T2LLE6_9SPHN)

HSP 1 Score: 181 bits (460), Expect = 2.360e-55
Identity = 91/159 (57.23%), Postives = 107/159 (67.30%), Query Frame = 0
Query:   33 TIASLPRFTRRDAIPLLLASLVVVPPVLAEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA 191
            TI+S  R          LA     P   A   ++ RTEQ+WR  L P++F VLR++GTERP SSPLN EKR GTF CAGCG P+F SAAKF+SGTGWPSF  AL    V +S    +  R EV C RCGGHLGHVF DGP+PTGLRYC+NG+AL+F PA
Sbjct:    3 TISSFDRRRFMGCAISALALFARAPAKAAARFEVVRTEQEWRRRLGPQRFAVLRQAGTERPGSSPLNREKRRGTFACAGCGLPLFSSAAKFDSGTGWPSFYRALTNAVVTKSDRSMLAPRTEVLCRRCGGHLGHVFNDGPKPTGLRYCMNGLALNFRPA 161          
BLAST of Gvermi12917.t1 vs. uniprot
Match: UPI001C686DF6 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C686DF6)

HSP 1 Score: 179 bits (453), Expect = 1.860e-54
Identity = 87/125 (69.60%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   68 RTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILL-RKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA 191
            ++E +WRA LTPEQF VLR+ GTER  SSPLNAEKR GTF CAGCG  +FDS AKFESGTGWPSF   L+G  V  S+  R+L+ R EV C RCGGHLGHVF DGP PTGLRYC+NGVAL F PA
Sbjct:   24 KSEAEWRAQLTPEQFRVLRQHGTERAGSSPLNAEKRRGTFVCAGCGNALFDSGAKFESGTGWPSFWQPLEGA-VGTSVDRRLLMTRTEVHCARCGGHLGHVFPDGPPPTGLRYCMNGVALRFEPA 147          
BLAST of Gvermi12917.t1 vs. uniprot
Match: UPI0018DF132E (peptide-methionine (R)-S-oxide reductase MsrB n=2 Tax=unclassified Roseomonas TaxID=2617492 RepID=UPI0018DF132E)

HSP 1 Score: 178 bits (451), Expect = 2.990e-54
Identity = 81/134 (60.45%), Postives = 98/134 (73.13%), Query Frame = 0
Query:   58 PVLAEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA 191
            P   E   + +TE +WRAAL+PE F VLRE GTERP +SPLNAEKR GTF CAGCG P+FD+AAK+ESGTGWPSF   ++G    ++     + R EV C  CGGHLGHVF DGP PTG R+C+NGV+L+F PA
Sbjct:    7 PAAGETFPVAKTEAEWRAALSPEAFRVLREHGTERPGTSPLNAEKRPGTFACAGCGAPLFDAAAKYESGTGWPSFFAPIEGAVATRTDRSFFMTRTEVHCAACGGHLGHVFPDGPAPTGQRFCMNGVSLAFRPA 140          
BLAST of Gvermi12917.t1 vs. uniprot
Match: A0A3S0DU02_9BRAD (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0DU02_9BRAD)

HSP 1 Score: 179 bits (453), Expect = 3.860e-54
Identity = 77/130 (59.23%), Postives = 99/130 (76.15%), Query Frame = 0
Query:   61 AEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSP 190
            AE  ++ +T ++W+  LTPEQ+++LRE+GTERPF+SPLN EKR GTF CAGC  P++ S  KF+SGTGWPSF  AL    V ++    +++R E  C RCGGHLGHVF DGP+PTGLRYC+NGVAL+F P
Sbjct:   37 AEKFEIEKTPEEWKKQLTPEQYYILREAGTERPFTSPLNHEKRKGTFACAGCDLPLYSSETKFDSGTGWPSFYQALPNALVEKTDRSFMMVRTETLCRRCGGHLGHVFNDGPKPTGLRYCMNGVALTFKP 166          
BLAST of Gvermi12917.t1 vs. uniprot
Match: A0A840Y910_9PROT (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Roseomonas alkaliterrae TaxID=1452450 RepID=A0A840Y910_9PROT)

HSP 1 Score: 177 bits (449), Expect = 6.010e-54
Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = 0
Query:   68 RTEQQWRAALTPEQFFVLRESGTERPFSSPLNAEKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRILLRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSP 190
            R+E +WRAAL+PE F VLR+ GTERP +SPLNAEKR G F CAGCG P+FD+AAK+ESGTGWPSF   ++G    ++     + R EV C RCGGHLGHVF DGP PTGLRYC+NGV+L+F+P
Sbjct:   17 RSEAEWRAALSPEAFRVLRQHGTERPGTSPLNAEKRPGIFACAGCGNPLFDAAAKYESGTGWPSFFAPIEGAVGTRTDRSFFMTRTEVHCARCGGHLGHVFPDGPAPTGLRYCMNGVSLAFTP 139          
The following BLAST results are available for this feature:
BLAST of Gvermi12917.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR91_9FLOR2.760e-6066.43Peptide-methionine (R)-S-oxide reductase n=1 Tax=G... [more]
UPI001E44034E1.110e-5666.94peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
UPI001BA74DD43.170e-5663.85peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
A0A2G8MQV6_9HYPH5.260e-5666.67Peptide-methionine (R)-S-oxide reductase n=4 Tax=M... [more]
UPI0010BF90391.280e-5563.43peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
A0A7T2LLE6_9SPHN2.360e-5557.23Peptide-methionine (R)-S-oxide reductase n=1 Tax=S... [more]
UPI001C686DF61.860e-5469.60peptide-methionine (R)-S-oxide reductase MsrB n=1 ... [more]
UPI0018DF132E2.990e-5460.45peptide-methionine (R)-S-oxide reductase MsrB n=2 ... [more]
A0A3S0DU02_9BRAD3.860e-5459.23Peptide-methionine (R)-S-oxide reductase n=1 Tax=B... [more]
A0A840Y910_9PROT6.010e-5464.23Peptide-methionine (R)-S-oxide reductase n=1 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.150.20Peptide methionine sulfoxide reductase.coord: 60..191
e-value: 7.9E-52
score: 176.8
NoneNo IPR availablePANTHERPTHR43234SLL1680 PROTEINcoord: 65..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 45..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 57..61
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..61
IPR002579Peptide methionine sulphoxide reductase MrsB domainPFAMPF01641SelRcoord: 72..190
e-value: 3.0E-44
score: 149.9
IPR002579Peptide methionine sulphoxide reductase MrsB domainTIGRFAMTIGR00357TIGR00357coord: 69..190
e-value: 7.1E-42
score: 140.6
IPR002579Peptide methionine sulphoxide reductase MrsB domainPROSITEPS51790MSRBcoord: 70..191
score: 57.202347
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 68..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2079799..2080374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12917.t1Gvermi12917.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2079799..2080374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12917.t1 ID=Gvermi12917.t1|Name=Gvermi12917.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=192bp
MHLTAFSLPSLIRTRKASEPPHSHSHSNPKYRTIASLPRFTRRDAIPLLL
ASLVVVPPVLAEPRDLPRTEQQWRAALTPEQFFVLRESGTERPFSSPLNA
EKRSGTFCCAGCGTPVFDSAAKFESGTGWPSFSLALDGVRVRQSLPDRIL
LRKEVSCTRCGGHLGHVFEDGPRPTGLRYCINGVALSFSPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB_dom
IPR011057Mss4-like_sf