Gvermi12744.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12744.t1
Unique NameGvermi12744.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length153
Homology
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BLAST of Gvermi12744.t1 vs. uniprot
Match: A0A7R9P005_9NEOP (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R9P005_9NEOP)

HSP 1 Score: 54.7 bits (130), Expect = 1.510e-6
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 0 
Query:   41 RRVPTALAPSCRSIHVSRATKLAPLARRVDALLHTGCTPVLLHAMGAAIAKCCQFALAIQQRSAHAVCIELTTSTQVVYDDYHPVVERAEETTVSRNVSALHVTL 145
            +R+P  L      I+V+  T       R + LL +G + +++H +GAA+AK    AL +Q +    V + + TST  + DD  P  ++A+  T +R+ S++H+ L
Sbjct:   31 KRLPPRLPRRINDIYVTNKTNHQSQVSRCEKLLDSGESELVIHGLGAAVAKAVNLALQLQDKYQGIVGLSVNTSTVDIVDDLEPTTDQADYDTQTRHNSSVHIRL 135
The following BLAST results are available for this feature:
BLAST of Gvermi12744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7R9P005_9NEOP1.510e-630.48Hypothetical protein n=3 Tax=Timema TaxID=61471 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 40..145
e-value: 9.1E-14
score: 53.3
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 54..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1362719..1363317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12744.t1Gvermi12744.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1362719..1363317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12744.t1 ID=Gvermi12744.t1|Name=Gvermi12744.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=153bp
MSQKRKRAPHGDEPGAPLPPPPPPPPQRATAPNPALYRVIRRVPTALAPS
CRSIHVSRATKLAPLARRVDALLHTGCTPVLLHAMGAAIAKCCQFALAIQ
QRSAHAVCIELTTSTQVVYDDYHPVVERAEETTVSRNVSALHVTLRHAPR
SV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036882Alba-like_dom_sf