Gvermi12727.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A2V3IH51_9FLOR (U1 small nuclear ribonucleoprotein C-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH51_9FLOR) HSP 1 Score: 139 bits (350), Expect = 3.870e-39 Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLIRPTYGVPPAVK 77
MGKCYCDYCDVFLTNDSVAVRKQHN+GNRHK+NVCEYYRQYIG +LQ+QID IVQQFE +VANGL+ TY +PP K
Sbjct: 1 MGKCYCDYCDVFLTNDSVAVRKQHNDGNRHKYNVCEYYRQYIGHRLQRQIDAIVQQFEADVANGLVHATYALPPIAK 77
BLAST of Gvermi12727.t1 vs. uniprot
Match: R7Q753_CHOCR (Similar to putative C-type U1 snRNP n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q753_CHOCR) HSP 1 Score: 131 bits (329), Expect = 1.600e-36 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLIRPTYGVP 73
MGKCYCDYCDVFLTNDSVAVRKQHN+GNRHK+NVCEYYRQYIG+QLQ+QID IV FE VA+GL+ P+Y +P
Sbjct: 1 MGKCYCDYCDVFLTNDSVAVRKQHNDGNRHKYNVCEYYRQYIGQQLQEQIDLIVHHFEQRVASGLLMPSYALP 73
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A7S2ZQ39_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQ39_9RHOD) HSP 1 Score: 115 bits (287), Expect = 2.900e-29 Identity = 51/104 (49.04%), Postives = 75/104 (72.12%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLIRPTYGVPPA-VKAHMVLQKAQENGDVPKHLDHPTENQP 103
MGK YCDYCDV+LT+DS AVRKQHN+GNRHK CEYY++Y+GK+ Q++ID+++++FE+ V +GL+ PT+G A VK + + E ++P + P + P
Sbjct: 111 MGKYYCDYCDVYLTHDSPAVRKQHNDGNRHKQAACEYYKEYVGKRTQKEIDRVIEEFEVKVMSGLVVPTFGFAEAPVKVAVPGEAGAEAAEMPSAIGDPNQTTP 214
BLAST of Gvermi12727.t1 vs. uniprot
Match: M2XIJ0_GALSU (U1 small nuclear ribonucleoprotein C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIJ0_GALSU) HSP 1 Score: 112 bits (280), Expect = 2.910e-29 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLIRPTYGVPPAVKAHMVL 82
MGK YCDYCDV+LT+DS AVRKQHN+GNRH+ N EYYRQ+IG+ LQQQID +V FE VA GL+ PTYG V++ L
Sbjct: 1 MGKYYCDYCDVYLTHDSPAVRKQHNDGNRHRMNFAEYYRQFIGESLQQQIDAVVYDFERRVALGLVVPTYGFATTVQSSSTL 82
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A7S0G6I6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6I6_9RHOD) HSP 1 Score: 109 bits (272), Expect = 3.350e-27 Identity = 45/75 (60.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLIRPTYGVPPA 75
MGK YCDYCDV+LT+DS AVRKQHN+GNRHK CEYY++Y+GK+ Q++ID+++ +FE+ V +GL+ PT+G A
Sbjct: 34 MGKYYCDYCDVYLTHDSPAVRKQHNDGNRHKQAACEYYKEYVGKRTQKEIDRVIDEFEVKVMSGLVVPTFGFAEA 108
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A6A5HLE2_CAERE (U1 small nuclear ribonucleoprotein C n=4 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A6A5HLE2_CAERE) HSP 1 Score: 73.2 bits (178), Expect = 6.870e-14 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLI-RPTYGVP 73
M K YCDYCD FLT+DS+ RK HNEG +HK V +Y++++ Q Q+ +DQ Q F+ N +G I R T G+P
Sbjct: 1 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLEAQAQKMVDQTAQAFQQNRMHGAIPRTTLGMP 74
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A0K9RRF2_SPIOL (U1 small nuclear ribonucleoprotein C n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RRF2_SPIOL) HSP 1 Score: 72.4 bits (176), Expect = 2.230e-13 Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQ-------FEINVANGLIRPTYGVPPAVKAHMVL 82
M + YCDYCD +LT+DS +VRKQHNEG +HK NV YY+Q+ +Q Q IDQ +++ F+I A RP + PP + A + +
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNEGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLSGQGAFQIGAAYAAWRPGFR-PPLLPAPLPI 88
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A2P4VXM5_CAERE (U1 small nuclear ribonucleoprotein C n=3 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A2P4VXM5_CAERE) HSP 1 Score: 73.2 bits (178), Expect = 2.410e-13 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLI-RPTYGVP 73
M K YCDYCD FLT+DS+ RK HNEG +HK V +Y++++ Q Q+ +DQ Q F+ N +G I R T G+P
Sbjct: 58 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLEAQAQKMVDQTAQAFQQNRMHGAIPRTTLGMP 131
BLAST of Gvermi12727.t1 vs. uniprot
Match: E3NE30_CAERE (U1 small nuclear ribonucleoprotein C n=2 Tax=Caenorhabditis remanei TaxID=31234 RepID=E3NE30_CAERE) HSP 1 Score: 73.6 bits (179), Expect = 2.670e-13 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLI-RPTYGVP 73
M K YCDYCD FLT+DS+ RK HNEG +HK V +Y++++ Q Q+ +DQ Q F+ N +G I R T G+P
Sbjct: 82 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLESQAQKMVDQTAQAFQQNRMHGAIPRTTLGMP 155
BLAST of Gvermi12727.t1 vs. uniprot
Match: A0A261BXD1_9PELO (Matrin-type domain-containing protein (Fragment) n=1 Tax=Caenorhabditis latens TaxID=1503980 RepID=A0A261BXD1_9PELO) HSP 1 Score: 73.2 bits (178), Expect = 3.430e-13 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query: 1 MGKCYCDYCDVFLTNDSVAVRKQHNEGNRHKFNVCEYYRQYIGKQLQQQIDQIVQQFEINVANGLI-RPTYGVP 73
M K YCDYCD FLT+DS+ RK HNEG +HK V +Y++++ Q Q+ +DQ Q F+ N +G I R T G+P
Sbjct: 77 MPKYYCDYCDAFLTHDSLKGRKTHNEGRKHKDAVRGFYQKWLEAQAQKMVDQTAQAFQQNRMHGAIPRTTLGMP 150 The following BLAST results are available for this feature:
BLAST of Gvermi12727.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12727.t1 ID=Gvermi12727.t1|Name=Gvermi12727.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=145bpback to top |