Gvermi12650.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12650.t1
Unique NameGvermi12650.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length514
Homology
BLAST of Gvermi12650.t1 vs. uniprot
Match: A0A2V3J3C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C9_9FLOR)

HSP 1 Score: 390 bits (1003), Expect = 6.850e-128
Identity = 205/379 (54.09%), Postives = 271/379 (71.50%), Query Frame = 0
Query:    1 MIEIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNIFHRAK-NGYGVRVGEGIPSLFRPVHLLRTRAAGNKLLLLGELFITVIIFWLELGVNGKTQLLYATETKYVLNGATFPDVLPNAKVSHLEPIEGLLSQSRSCFRRVRPNTYELYGLAYTSPQNFERDNSRVFGFNQSICLDPESVQSSVGIRFVADYDSIIHSYEMNTRRFKVHTLPGTVVEGVLEGTCEASLYGQNSFTVFGASSWFGRKMVTASRLKRDQFMLEFGGLDTLDDKTDSNNNSTIVSDYGSRSCAHLNYTRMTRRDFSVNITTMNTELDVTSLARSMSVFSAD-----FPTLT-VYTSFNAVDLMVLFFFSGDVDSDADTQQRIGQFQRMQ 372
            MI IP+RSGIVNAVLE  LVLIV P+W +AL+ + N+  F  A+  G  VR+G+ +PS+ RP+ LLRTRAAGNKLLL+GE+ I ++IFWLELGVNG+TQ  Y  +T+YVLNG  FPDV P + ++ L  I+GL SQSRSCFR+V  +TYELYG++YTSPQNFE+D +R +GFNQS+CL P++V+S VGIRFV DYDS +  +++NT RF+   +P  V +  L G+CE SLYG N+FTV G      R M TA    +D+F +E GGL  L+   D N+ + +  DYG+ +C  LNYTRMTRR+FS+ +T MNT+LDV  LAR++  +  D     +P  + VY  +NAVDL    FFSG+++SD DT+Q IGQF RMQ
Sbjct:    1 MISIPVRSGIVNAVLEACLVLIVAPIWNNALVKITNRRTFRNARVKGNAVRIGQQLPSISRPLTLLRTRAAGNKLLLIGEIVIAIVIFWLELGVNGETQGEYNLQTRYVLNGGGFPDVAPLSNLTRLRIIKGLSSQSRSCFRQVERDTYELYGVSYTSPQNFEKDVARKYGFNQSLCLGPDNVESGVGIRFVTDYDSDVGEHDLNTSRFRPGRIPDGVEDAPLPGSCEGSLYGTNTFTVLGTYISGSRIMATAIEEDKDRFEIEIGGLVNLE-YDDPNDYTILERDYGTSTCIDLNYTRMTRREFSIKVTAMNTKLDVRGLARAVIAYMNDKTPHPYPEDSGVYRPYNAVDLFTDIFFSGEIESDEDTEQVIGQFDRMQ 378          
BLAST of Gvermi12650.t1 vs. uniprot
Match: A0A2V3IG70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG70_9FLOR)

HSP 1 Score: 370 bits (951), Expect = 2.920e-120
Identity = 192/379 (50.66%), Postives = 270/379 (71.24%), Query Frame = 0
Query:    3 EIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNIFHRAKN-GYGVRVGEGIPSLFRPVHLLRTRAAGNKLLLLGELFITVIIFWLELGVNGKTQLLYATETKYVLNGATFPDVLPNAKVSHLEPIEGLLSQSRSCFRRVRPNTYELYGLAYTSPQNFERDNSRVFGFNQSICLDPESVQSSVGIRFVADYDSIIHSYEMNTRRF-KVHTLPGTVVEGVLEGTCEASLYGQNSFTVFGASSWFGRKMVTASRLKRDQFMLEFGGLDTLDDKTDSNNNSTIVSDYGSRSCAHLNYTRMTRRDFSVNITTMNTELDVTSLARSMSVFSADFPTLTVYTSFNAVDLMVLFFFSGDVDSDADTQQRIGQFQRMQRAVNLQG 379
             IP+RSGIVNA+LEV++VL+V P+W  AL  + N   F +A+  G+GV+VG+ IP+L  P   L+T A G K LL+GE+ + +IIFWLELGVNG+T+++Y  + +++LNG  FP+V+P +KV HL+ I GL S+SRSCFRRV  NTYELY +AYTSPQNFER  S+ +GFN SICLD ++ + +VG+RFV DY  +I  ++MNT+RF K   +P  + EG +  TCE SLYG N++TV G  +W  R M TA +   ++  LE GGL  L+D  D+N+ S    DYG+ +CA LNYTRMTRR+FSV +T +N++LD  ++AR++S +  D+    VY +++AVD+M   F+SG++DSD D  Q IGQF++MQ  V L+G
Sbjct:    2 NIPVRSGIVNAILEVAVVLLVAPIWNKALTKIFNFYTFRKARTKGHGVQVGQQIPTLSDPFTSLKTWAVGTKFLLIGEIALVIIIFWLELGVNGETEMVYHPQKRFILNGGGFPNVIPISKVEHLQMIPGLSSESRSCFRRVGRNTYELYAVAYTSPQNFERYISQAYGFNDSICLDDDNARPTVGVRFVGDYRRVIGEWDMNTKRFTKKERIPDGLGEGFVRNTCEGSLYGMNTYTVLGKYNWGSRIMSTAIKKGENEIELEIGGLVNLEDN-DTNDYSIGYRDYGTSTCAELNYTRMTRREFSVTLTALNSKLDFKNIARALSSY-LDYVPHGVYRNYDAVDIMTELFYSGEIDSDEDGSQTIGQFEQMQ--VRLRG 376          
BLAST of Gvermi12650.t1 vs. uniprot
Match: A0A2V3IK59_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK59_9FLOR)

HSP 1 Score: 255 bits (652), Expect = 7.380e-77
Identity = 136/282 (48.23%), Postives = 193/282 (68.44%), Query Frame = 0
Query:   99 LLYATETKYVLNGATFPDVLPNAKVSHLEPIEGLLSQSRSCFRRVRPNTYELYGLAYTSPQNFERDNSRVFGFNQSICLDPESVQSSVGIRFVADYDSIIHSYEMNTRRF-KVHTLPGTVVEGVLEGTCEASLYGQNSFTVFGASSWFGRKMVTASRLKRDQFMLEFGGLDTLDDKTDSNNNSTIVSDYGSRSCAHLNYTRMTRRDFSVNITTMNTELDVTSLARSMSVFSADFPTLTVYTSFNAVDLMVLFFFSGDVDSDADTQQRIGQFQRMQRAVNLQG 379
            ++Y  + ++VLNG  FP+V+P +KV HL+ I GL S+SRSCFRRV  NTYELY +AYTSPQNFER  S+ +GFN S CLD ++ + +VG+RFV DY  +I  ++MNT+RF K   +P  + EG +  TCE SLYG N++ V G  +W  R M TA +   ++  LE GGL  L+D  D+N+ S    DYG+ +CA LNYTRMT R+FSV +T +N++LD  ++AR++S +  D+    VY +++AVD+M   F+SG+  +D D  Q IGQF++MQ  V L+G
Sbjct:    1 MVYHPQKRFVLNGGGFPNVIPKSKVEHLQMIPGLSSESRSCFRRVGRNTYELYAVAYTSPQNFERYISQAYGFNDSTCLDDDNARPTVGVRFVGDYRRVIGEWDMNTKRFTKEERIPDGLGEGFVRNTCEGSLYGMNTYAVLGKYNWGSRIMSTAIKKGENEIELEIGGLVNLEDN-DTNDYSIGYRDYGTSTCAELNYTRMTWREFSVTLTALNSKLDFKNIARALSSY-LDYVPHGVYRNYDAVDIMTELFYSGE--NDEDGSQTIGQFEQMQ--VQLRG 276          
The following BLAST results are available for this feature:
BLAST of Gvermi12650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3C9_9FLOR6.850e-12854.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG70_9FLOR2.920e-12050.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK59_9FLOR7.380e-7748.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..514
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:3904..7285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12650.t1Gvermi12650.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 3904..7285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12650.t1 ID=Gvermi12650.t1|Name=Gvermi12650.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=514bp
MIEIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNIFHRAKNGYGVR
VGEGIPSLFRPVHLLRTRAAGNKLLLLGELFITVIIFWLELGVNGKTQLL
YATETKYVLNGATFPDVLPNAKVSHLEPIEGLLSQSRSCFRRVRPNTYEL
YGLAYTSPQNFERDNSRVFGFNQSICLDPESVQSSVGIRFVADYDSIIHS
YEMNTRRFKVHTLPGTVVEGVLEGTCEASLYGQNSFTVFGASSWFGRKMV
TASRLKRDQFMLEFGGLDTLDDKTDSNNNSTIVSDYGSRSCAHLNYTRMT
RRDFSVNITTMNTELDVTSLARSMSVFSADFPTLTVYTSFNAVDLMVLFF
FSGDVDSDADTQQRIGQFQRMQRAVNLQGALMEGSRAEVCQDADEESDEE
VIGVPVVDLEQMLEEQEVELKGSAYCYGNVSRMSPSEKRKQRLSKEADAA
KEKTPKEFWNDMIRDTLARHPDYFTSENAKLKDECITAKGKIGYPGLKIT
PENCLDLQDVYMLR
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