Gvermi12473.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12473.t1
Unique NameGvermi12473.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length202
Homology
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A7S2ZA71_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZA71_9RHOD)

HSP 1 Score: 267 bits (682), Expect = 4.280e-88
Identity = 126/194 (64.95%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETLAP 198
            R KR RK+AEVKR ++PND RLK   LSK  AAPIV K SD+D LA +  P+SMFF +N +LGPP+ +LLDTNF NFS+ NK+DV R +L+CL AP+  C++DCV+ ELQKL  KY +AL+IA+D+RF RL C+H+GTYADDC++ R+ A+RIYIVATCD+DLKRRIRKVPGVPIMYIS H+Y +ERLP+ LAP
Sbjct:   24 RMKRTRKFAEVKRKLNPNDDRLKTMALSKARAAPIVGKVSDEDKLAKTPTPTSMFFNYNSALGPPYHVLLDTNFFNFSIKNKLDVRRSLLDCLMAPNFGCVTDCVMGELQKLGSKYKLALKIAKDKRFVRLPCSHQGTYADDCLVDRVIANRIYIVATCDRDLKRRIRKVPGVPIMYISSHKYAIERLPDALAP 217          
BLAST of Gvermi12473.t1 vs. uniprot
Match: M2Y6A8_GALSU (PINc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6A8_GALSU)

HSP 1 Score: 252 bits (644), Expect = 1.230e-82
Identity = 119/193 (61.66%), Postives = 157/193 (81.35%), Query Frame = 0
Query:    7 KRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPET-LAP 198
            K +RK+A+V+R ++P D RLKIK  SKQ+AAPIV +  D++ L +   P+++FF +N SLGPPF IL+DTNFINFSV NK+D+ + M++CL AP + CI+DCV+AEL+KL  KY +AL++ARD+RF RL CTHKGTYADDC+++R+  +R+YIV TCDKDLKRRIRKVPGVPIMYI  H+Y +ERLP+  LAP
Sbjct:    3 KMKRKFAQVRRKLNPKDQRLKIKLWSKQDAAPIVHQTKDEEKLRNLPVPTNLFFSYNLSLGPPFHILMDTNFINFSVVNKLDILKAMMDCLYAPCVACITDCVMAELEKLGTKYRLALKVARDKRFLRLKCTHKGTYADDCLIERVQQNRVYIVGTCDKDLKRRIRKVPGVPIMYIKQHRYTIERLPDAILAP 195          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A1X6P199_PORUM (PINc domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P199_PORUM)

HSP 1 Score: 239 bits (611), Expect = 1.460e-77
Identity = 121/202 (59.90%), Postives = 155/202 (76.73%), Query Frame = 0
Query:    1 MGNARKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSD--KDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPET--LAP 198
            MG A  KR R+Y   KRL++P D RL++K  +K +AAPIV + SD  K  + ++   S +FF  N +LGPPF +LLDTNF+N SV NK+D+ RGML+CLAA   + +S+CV+AELQKL  K+ +ALR+ARD+ F +L CTHKGTYADDCI+ R+ A RIYIVATCD+DL+RR+RKVPGVPIMYISGH+Y VERLP+   LAP
Sbjct:    1 MGRA--KRTRQYGATKRLLNPKDDRLQLKAAAKADAAPIVHRSSDATKGAVDATVQRSELFFSHNRALGPPFHVLLDTNFLNMSVVNKLDIARGMLDCLAASVTVYVSECVMAELQKLGPKFRIALRLARDKTFVQLPCTHKGTYADDCIVDRVTASRIYIVATCDRDLRRRLRKVPGVPIMYISGHKYTVERLPDAAFLAP 200          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A4P9Z3A2_9FUNG (Fcf1-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z3A2_9FUNG)

HSP 1 Score: 233 bits (595), Expect = 3.240e-75
Identity = 113/199 (56.78%), Postives = 156/199 (78.39%), Query Frame = 0
Query:    2 GNARKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETL-APT 199
            G A+K RQ  +A+VKRL+SPND+RLK  +  +++A+    K+  ++I       SS+FF++N +LGPP+ +++DTNFINFS+ NK+++ R M++CL A  + CI+DCV+AEL+KL  KY VALR+ARD RF+RL CTHKGTYADDCI+QR+  H+ YIVATCD+DLKRRIRK+PGVPIM+I+ H+Y +ER+PE   APT
Sbjct:    1 GKAKKTRQ--FAQVKRLLSPNDARLKANQAKEKKASEDKEKELVRNI---PQMASSLFFKYNTALGPPYHVIVDTNFINFSIQNKLELVRAMMDCLYAKCVPCITDCVLAELEKLGSKYRVALRVARDPRFERLPCTHKGTYADDCIVQRVMQHKCYIVATCDRDLKRRIRKIPGVPIMFIAQHKYTIERMPEAYGAPT 194          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A197K8F8_9FUNG (Fcf1-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197K8F8_9FUNG)

HSP 1 Score: 233 bits (593), Expect = 6.740e-75
Identity = 115/196 (58.67%), Postives = 152/196 (77.55%), Query Frame = 0
Query:    7 KRQRKYAEVKRLISPNDSRLKIKE--LSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETL-APT 199
            K  +K+A VKR+I+PND+RLK+ +  L K+E      +K  K +       SSMFF +N +LGPP+RIL+DTNFINFS+ NKI++ +GM++CL A SI CI+DCV+AEL+KL  K+ VALR+ARD RF+RL CTHKGTYADDC+++R+  H+ YIVATCD+DLKRRIRK+PG+PIMY+S  +Y +ERLPE   APT
Sbjct:    5 KTTKKFALVKRMINPNDARLKVNQEKLKKKEE-----EKEKKAVRHIPQVASSMFFNYNSALGPPYRILVDTNFINFSIQNKIELVKGMMDCLYAKSIPCITDCVMAELEKLGPKFKVALRVARDPRFERLPCTHKGTYADDCLVERVMQHKCYIVATCDRDLKRRIRKIPGIPIMYLSQRKYTIERLPEAYGAPT 195          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A8PW97_MALGO (PINc domain-containing protein n=2 Tax=Malassezia TaxID=55193 RepID=A8PW97_MALGO)

HSP 1 Score: 231 bits (589), Expect = 2.560e-74
Identity = 109/195 (55.90%), Postives = 155/195 (79.49%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETLAPT 199
            +KK+ RK+ EVKR+++P D+RLK  +   +E A   A+K +        A SSMFF+ N +LGPP+R+L+DTNFINFS+ NKI++ +GM++CL A +I CI+ CV++EL+KL  KY +ALR+ARD RF+RL CTHKGTYADDCI++RI +H+ YIVATCD++L+RR+R+VPG+P+MYI+ H+Y++ERLP+  APT
Sbjct:    3 KKKQVRKFGEVKRMLNPKDTRLKHNQ---KEQAVAQAQKEEGKKKYKEMAASSMFFQHNSALGPPYRVLVDTNFINFSLQNKIELVQGMMDCLYAKTIPCITTCVLSELEKLGPKYRIALRVARDPRFERLECTHKGTYADDCIIERIKSHKCYIVATCDRELRRRVRQVPGIPLMYIARHRYRIERLPDQGAPT 194          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A316UYX8_9BASI (Fcf1-domain-containing protein n=2 Tax=Microstromatales incertae sedis TaxID=162477 RepID=A0A316UYX8_9BASI)

HSP 1 Score: 231 bits (589), Expect = 2.560e-74
Identity = 110/199 (55.28%), Postives = 158/199 (79.40%), Query Frame = 0
Query:    4 ARKKRQRKYAEVKRLISPNDSRLK---IKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETLAPT 199
            A++K+ +K+A VKR+++PND RLK   +K  +K++AA       ++ +    +A SS+FF+ N +LGPP+R+L+DTNFINFS+ NKI++ +GM++CL A SI CI+DCV+AEL+KL  KY +ALR+ARD RF+RL C+HKGTYADDCI+ R++ H+ Y+VATCDK+L+RR+RKVPG+P+MYIS H+Y VERLP+   P+
Sbjct:    2 AKRKQVKKFATVKRMLNPNDQRLKENQVKADAKKKAA------EEQKVRHVETAASSLFFQHNTALGPPYRVLVDTNFINFSLQNKIELVQGMMDCLYAKSIPCITDCVLAELEKLGPKYRIALRVARDPRFERLPCSHKGTYADDCIVDRVSTHKCYMVATCDKELRRRVRKVPGIPLMYISKHRYAVERLPDQGMPS 194          
BLAST of Gvermi12473.t1 vs. uniprot
Match: U9SSR2_RHIID (Fcf1-domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=U9SSR2_RHIID)

HSP 1 Score: 231 bits (589), Expect = 2.640e-74
Identity = 114/195 (58.46%), Postives = 152/195 (77.95%), Query Frame = 0
Query:    1 MGNARKKRQRKYAEVKRLISPNDSRLK-IKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPE 194
            MG A+K   RK+AEVKRLI+P DSRLK I+E  K+       +K+ + +       SS+FFR+N +LGPP+R+++DTNFINFS+ NK+++ R M++CL A  I CI+DCV+AEL+KL  KY +ALR+ARD RF+RL C HKGTYADDC++QR++ H+ YIVATCD+DLKRRIRK+PG+PIMYIS  +Y +ERLPE
Sbjct:    1 MGKAKK--TRKFAEVKRLINPADSRLKSIQEKQKKRQE----EKTKESVRNVPQVASSLFFRYNTALGPPYRVMVDTNFINFSIQNKLELVRSMMDCLYAKCIPCITDCVMAELEKLGPKYRIALRVARDPRFERLPCMHKGTYADDCLVQRVSQHKCYIVATCDRDLKRRIRKIPGIPIMYISKRRYTIERLPE 189          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A397JSP6_9GLOM (PINc domain-containing protein n=2 Tax=Glomeromycetes TaxID=214506 RepID=A0A397JSP6_9GLOM)

HSP 1 Score: 231 bits (590), Expect = 3.970e-74
Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 0
Query:    1 MGNARKKRQRKYAEVKRLISPNDSRLKI---KELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPE 194
            MG A  KR RK+AE KRL++P DSRLK    K+ +K+E      +K   ++       SS+FFR+N +LGPP+ +L+DTNFINFS+ NK+++ + M++CL A SI CI+DCV+AEL+KL  KY +ALRIARD RF+RL CTHKGTYADDC++QR+  H+ YIVATCD+DLKRRIRK+PG+PIMYIS  +Y +ERLPE
Sbjct:   24 MGKA--KRTRKFAEAKRLLNPKDSRLKSVQEKQKTKEE------QKRKSEVRNVPQVASSLFFRYNTALGPPYHVLVDTNFINFSIQNKLELVQAMMDCLYAKSIPCITDCVMAELEKLGPKYRIALRIARDPRFERLPCTHKGTYADDCLVQRVMQHKCYIVATCDRDLKRRIRKIPGIPIMYISKRKYTIERLPE 212          
BLAST of Gvermi12473.t1 vs. uniprot
Match: A0A7S2DVI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVI1_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.020e-73
Identity = 111/190 (58.42%), Postives = 147/190 (77.37%), Query Frame = 0
Query:    5 RKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILASSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAPSIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQRIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPE 194
            ++K+ RKYA  K++IS NDSR+K  + +++E A  + K   +        PS+MFF++N +LGPP+ IL+DTNFINFS+ NK+++T  M+NCL A    CI+DCV+AEL+KL +KY VALR+A+D RF+RL CTHKGTYADDC++ R   HR YIVATCDKDL+R+IRKVPGVPIMYISG +Y VER+PE
Sbjct:    9 KQKKTRKYAVAKKVISKNDSRIKENQKAQKETA--LKKIETEKPRQIDQTPSTMFFKYNTALGPPYHILVDTNFINFSIKNKLEITASMMNCLFAKCTPCITDCVMAELEKLGQKYRVALRLAKDPRFERLPCTHKGTYADDCLLHRCTQHRCYIVATCDKDLRRKIRKVPGVPIMYISGRKYTVERMPE 196          
The following BLAST results are available for this feature:
BLAST of Gvermi12473.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2ZA71_9RHOD4.280e-8864.95Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2Y6A8_GALSU1.230e-8261.66PINc domain-containing protein n=1 Tax=Galdieria s... [more]
A0A1X6P199_PORUM1.460e-7759.90PINc domain-containing protein n=1 Tax=Porphyra um... [more]
A0A4P9Z3A2_9FUNG3.240e-7556.78Fcf1-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A197K8F8_9FUNG6.740e-7558.67Fcf1-domain-containing protein n=2 Tax=Mortierella... [more]
A8PW97_MALGO2.560e-7455.90PINc domain-containing protein n=2 Tax=Malassezia ... [more]
A0A316UYX8_9BASI2.560e-7455.28Fcf1-domain-containing protein n=2 Tax=Microstroma... [more]
U9SSR2_RHIID2.640e-7458.46Fcf1-domain-containing protein n=8 Tax=Eukaryota T... [more]
A0A397JSP6_9GLOM3.970e-7458.38PINc domain-containing protein n=2 Tax=Glomeromyce... [more]
A0A7S2DVI1_9STRA1.020e-7358.42Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002716PIN domainSMARTSM00670PIN_9coord: 70..169
e-value: 1.5E-7
score: 41.1
IPR006984rRNA-processing protein Fcf1/Utp23PFAMPF04900Fcf1coord: 95..191
e-value: 1.0E-30
score: 105.9
NoneNo IPR availableGENE3D3.40.50.1010coord: 55..197
e-value: 7.2E-39
score: 135.0
NoneNo IPR availablePANTHERPTHR12416UNCHARACTERIZEDcoord: 5..196
NoneNo IPR availablePANTHERPTHR12416:SF2RRNA-PROCESSING PROTEIN FCF1 HOMOLOGcoord: 5..196
IPR037503rRNA-processing protein Fcf1, PIN domainCDDcd09864PIN_Fcf1-likecoord: 60..190
e-value: 1.95016E-83
score: 241.285
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 68..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4995691..4996296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12473.t1Gvermi12473.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4995691..4996296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12473.t1 ID=Gvermi12473.t1|Name=Gvermi12473.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=202bp
MGNARKKRQRKYAEVKRLISPNDSRLKIKELSKQEAAPIVAKKSDKDILA
SSSAPSSMFFRFNPSLGPPFRILLDTNFINFSVANKIDVTRGMLNCLAAP
SIICISDCVIAELQKLPKKYSVALRIARDRRFKRLICTHKGTYADDCIMQ
RIAAHRIYIVATCDKDLKRRIRKVPGVPIMYISGHQYKVERLPETLAPTL
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR006984Fcf1/Utp23
IPR037503Fcf1_PIN
IPR029060PIN-like_dom_sf