Gvermi12467.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12467.t1
Unique NameGvermi12467.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length97
Homology
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A2M7T5S3_9ACTN (Magnesium transport protein CorA n=1 Tax=Candidatus Aquicultor secundus TaxID=1973895 RepID=A0A2M7T5S3_9ACTN)

HSP 1 Score: 95.1 bits (235), Expect = 3.020e-21
Identity = 40/95 (42.11%), Postives = 65/95 (68.42%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  + +   RD    +L++ L+  +NRM E M+ L ++ T+F+PLTF+ G+ GMNF++MPEL  RW Y   WA+++++VL  LA+FRR++W+
Sbjct:  262 HTIQVIDTIETFRDMLSGMLDIYLSSISNRMNEIMKVLTIIATIFIPLTFIVGVYGMNFQYMPELGSRWGYPTVWAIMIVIVLFMLAYFRRRKWL 356
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A3M1ZET3_9BACT (Magnesium transport protein CorA (Fragment) n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M1ZET3_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 3.420e-21
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            HC Q  + +   RD     L+V L+  +NRM E M+TL V+ T+F+PLTFLAG+ GMNF HMPEL  RW Y A WA+++ + +  + +FRR+ W+
Sbjct:  139 HCVQVIDTVETYRDLLAGYLDVYLSSLSNRMNEVMKTLTVIATIFIPLTFLAGVYGMNFEHMPELKWRWGYPAVWAVMVAVGIGMVRWFRRRGWL 233
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A1V4WHP4_9DELT (Magnesium transport protein CorA n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1V4WHP4_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 3.500e-21
Identity = 42/95 (44.21%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  E +   RD   +LL++ L+  +NRM E M+ L V+ T+F+P+TFLAG+ GMNF++ PEL  RW+Y +FW  V+++ +L + +FRRK+W+
Sbjct:  246 HTVQIIETMETNRDIISSLLDIYLSSTSNRMNEIMKVLTVIATIFMPMTFLAGVYGMNFKYFPELEWRWAYISFWIAVIIIAVLMIFYFRRKKWL 340
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BLAST of Gvermi12467.t1 vs. uniprot
Match: E1R979_SEDSS (Magnesium transport protein CorA n=2 Tax=Sediminispirochaeta TaxID=1911556 RepID=E1R979_SEDSS)

HSP 1 Score: 94.7 bits (234), Expect = 4.070e-21
Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  + L   RD   ++L++ L+  +N+M   M+ L +++T+F+PL+F+AG+ GMNFR+MPEL  RWSY  FW +  L+++  L FFR+KRWI
Sbjct:  259 HTVQIIDTLESYRDMASSMLDIYLSSVSNKMNVVMKVLTIISTLFIPLSFIAGVYGMNFRYMPELQWRWSYPIFWLVCFLILIGMLIFFRKKRWI 353
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A5K7Z2K0_9DELT (Magnesium transport protein CorA n=1 Tax=Desulfosarcina widdelii TaxID=947919 RepID=A0A5K7Z2K0_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 4.120e-21
Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q+ + +   RD    L ++ L++ +NRM E M+ L V+ T+F+P+TF+AGI GMNF HMPEL  RW Y  FW +V+ +V+  + FFR+KRW+
Sbjct:  260 HTIQTIDTIESFRDILSGLQDLYLSIISNRMNEVMKVLTVIATIFIPVTFIAGIYGMNFTHMPELEWRWGYPLFWIVVVAVVVGMIFFFRKKRWL 354
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A2N6EHE6_9DELT (Magnesium transport protein CorA n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EHE6_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 4.120e-21
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  + +   RD    LL++ L+  +NRM E M+ L ++ T+F+PLTFLAGI GMNF H+PEL  RW YAAFW  V++L      FFRRK+W+
Sbjct:  260 HTIQVVDTVETFRDLIGGLLDLYLSSISNRMNEVMKVLTIIATIFIPLTFLAGIYGMNFEHIPELKWRWGYAAFWLAVVVLGGAMFGFFRRKKWL 354
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A1G9L0T5_9BACT (Magnesium transport protein CorA n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9L0T5_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 4.350e-21
Identity = 43/95 (45.26%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  E +   RD    LL+V L++ +NRM + M+ L +++T+F+PLTF+AGI GMNF HMPEL+ RW+Y A W +++ + +  L FF++KRW+
Sbjct:  265 HTIQIIETIETYRDILSGLLDVYLSITSNRMNQIMKVLTIISTIFIPLTFIAGIYGMNFDHMPELHERWAYPAVWGVMIAISVALLIFFQKKRWL 359
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BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A653A3X6_9DELT (Magnesium transport protein CorA n=2 Tax=Desulfatiglans TaxID=1549126 RepID=A0A653A3X6_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 7.970e-21
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  + L   RD   A L+V L+  +NRM E M+ L ++ T+F+PLTF+AG+ GMNFRHMPEL  RW YAA W ++++   L +  FRRK+W+
Sbjct:  260 HTIQVVDTLETFRDMAAATLDVYLSSLSNRMNEVMKVLTIIATIFIPLTFIAGVYGMNFRHMPELEWRWGYAAVWLVMIVAGGLMVLAFRRKKWL 354
[Close]
BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A1W1XKR6_9DELT (Magnesium transport protein CorA n=1 Tax=Desulfacinum hydrothermale DSM 13146 TaxID=1121390 RepID=A0A1W1XKR6_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 7.970e-21
Identity = 43/95 (45.26%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q  + L   R+   ALL+V L+  +NRM E M+ L ++ T+F+P+TF+AG+ GMNF++MPEL   W+Y A W +++++ +L L FFR+KRWI
Sbjct:  260 HVFQVLDTLENQREMGTALLDVYLSSMSNRMNEVMKVLTIIATIFIPITFIAGVYGMNFQYMPELKWPWAYPAVWLIMIVVAVLMLLFFRKKRWI 354
[Close]
BLAST of Gvermi12467.t1 vs. uniprot
Match: A0A1M5D8F6_9DELT (Magnesium transport protein CorA n=1 Tax=Desulfacinum infernum DSM 9756 TaxID=1121391 RepID=A0A1M5D8F6_9DELT)

HSP 1 Score: 93.6 bits (231), Expect = 1.110e-20
Identity = 42/95 (44.21%), Postives = 66/95 (69.47%), Query Frame = 0 
Query:    2 HCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLTFLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI 96
            H  Q+ ++L   R+   ALLEV L+  +NRM E M+ L ++ T+F+P+TF+AG+ GMNF HMPEL   W+Y A W +++ + +L L +FR+K+W+
Sbjct:  260 HVLQALDILDNHREMGSALLEVYLSTQSNRMNEVMKVLTIIATIFIPVTFIAGVYGMNFEHMPELKWPWAYPAVWIVMIGVGVLMLFYFRKKKWL 354
The following BLAST results are available for this feature:
BLAST of Gvermi12467.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2M7T5S3_9ACTN3.020e-2142.11Magnesium transport protein CorA n=1 Tax=Candidatu... [more]
A0A3M1ZET3_9BACT3.420e-2146.32Magnesium transport protein CorA (Fragment) n=1 Ta... [more]
A0A1V4WHP4_9DELT3.500e-2144.21Magnesium transport protein CorA n=3 Tax=Deltaprot... [more]
E1R979_SEDSS4.070e-2144.21Magnesium transport protein CorA n=2 Tax=Sediminis... [more]
A0A5K7Z2K0_9DELT4.120e-2145.26Magnesium transport protein CorA n=1 Tax=Desulfosa... [more]
A0A2N6EHE6_9DELT4.120e-2148.42Magnesium transport protein CorA n=1 Tax=Desulfuro... [more]
A0A1G9L0T5_9BACT4.350e-2145.26Magnesium transport protein CorA n=1 Tax=Catalinim... [more]
A0A653A3X6_9DELT7.970e-2147.37Magnesium transport protein CorA n=2 Tax=Desulfati... [more]
A0A1W1XKR6_9DELT7.970e-2145.26Magnesium transport protein CorA n=1 Tax=Desulfaci... [more]
A0A1M5D8F6_9DELT1.110e-2044.21Magnesium transport protein CorA n=1 Tax=Desulfaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.340Magnesium transport protein CorA, transmembrane regioncoord: 19..96
e-value: 2.1E-24
score: 87.1
NoneNo IPR availablePANTHERPTHR46494CORA FAMILY METAL ION TRANSPORTER (EUROFUNG)coord: 2..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..90
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 39..58
IPR002523Mg2+ transporter protein, CorA-like/Zinc transport protein ZntBPFAMPF01544CorAcoord: 4..92
e-value: 2.4E-21
score: 76.3
IPR045863CorA, transmembrane regionSUPERFAMILY144083Magnesium transport protein CorA, transmembrane regioncoord: 31..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4950445..4950735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12467.t1Gvermi12467.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4950445..4950735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12467.t1 ID=Gvermi12467.t1|Name=Gvermi12467.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=97bp
LHCAQSAELLAGVRDGTHALLEVLLAVHNNRMQETMQTLAVVTTMFVPLT
FLAGIEGMNFRHMPELNGRWSYAAFWALVLLLVLLQLAFFRRKRWI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002523MgTranspt_CorA/ZnTranspt_ZntB
IPR045863CorA_TM1_TM2