Gvermi12407.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12407.t1
Unique NameGvermi12407.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length136
Homology
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A2V3J550_9FLOR (CST complex subunit TEN1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J550_9FLOR)

HSP 1 Score: 189 bits (480), Expect = 7.710e-60
Identity = 86/122 (70.49%), Postives = 108/122 (88.52%), Query Frame = 0
Query:    3 AAVNMPDIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELERFENELLLRARIAKEMKGVDIDLYDRCLKIRKDFDKN 124
            +A NMPDIKSGKLMQ+ ELD+W PD+RHGSAVRV+GR+K +++ R+L+FIE+  R+LAVHT  + +PVFG D IGK+FM+LGELERF+NELLLRARIA+E+ GVD DLYDRCLK+RKDFDK+
Sbjct:    2 SAANMPDIKSGKLMQLSELDDWKPDDRHGSAVRVIGRLKSLDYRRKLIFIEYRTRQLAVHTEQLGEPVFGSDQIGKLFMFLGELERFDNELLLRARIARELTGVDPDLYDRCLKVRKDFDKS 123          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A5P1EDX1_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EDX1_ASPOF)

HSP 1 Score: 74.3 bits (181), Expect = 2.250e-14
Identity = 37/119 (31.09%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    9 DIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDFDKNIL 126
            DIK GKL+ + EL+  +P  +HGS++RV G+++       +  I   G  L ++T  + +    +D I   + ++GEL+ + EN+ +L+AR+ + + G+D++LY + +K+R+ F++ I+
Sbjct:    5 DIKPGKLVALHELEASSPFFKHGSSLRVTGKLQAHSVETGIAIITDGGVSLKINTKHLTNLSLRIDSI---YQFIGELQIQSENDAILQARVGRNVDGIDLNLYYQTMKLRRKFEEEIV 120          
BLAST of Gvermi12407.t1 vs. uniprot
Match: D8RL68_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RL68_SELML)

HSP 1 Score: 66.6 bits (161), Expect = 1.170e-11
Identity = 36/112 (32.14%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   11 KSGKLMQIDEL-DNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELERFENELLLRARIAKEMKGVDIDLYDRCLKIRKDF 121
            ++G ++Q+ EL +  +P  RH  ++RV+G ++  +    +  I H G +LAV T L+ D        G ++ ++GEL   +N ++LRAR+A+ + G+D+ LY++ L++R+ F
Sbjct:    1 EAGTIVQLPELLEPGSPFCRHMKSLRVMGTLESFDVESGVAHIRHEGAKLAVDTTLLRDIHLRP---GSLYQFIGEL-LLQNGMMLRARVARNVDGLDVKLYEKALRLRRIF 108          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A485LP17_9STRA (Aste57867_23900 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP17_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.040e-10
Identity = 37/119 (31.09%), Postives = 64/119 (53.78%), Query Frame = 0
Query:   10 IKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELERFENELLLRARIAKEMKGVDIDLYDRCLKIRKDFDKNILDA 128
            + +G++M IDE+       R   +VRV GR+   +  + L  +      + V T L+V+  F    IG ++ ++GE    E +L LRAR+ + + G+DI ++   LK+R+DF K  + A
Sbjct:    2 LAAGEIMHIDEVLRENALHR---SVRVTGRLDAYDANKSLAALSFQNATIVVSTELLVNFDFM---IGSMYQFIGETYAHEGKLQLRARVGRNVDGLDIQMFTDALKLRRDFIKTTMAA 114          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A830DCE5_9LAMI (Uncharacterized protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830DCE5_9LAMI)

HSP 1 Score: 62.4 bits (150), Expect = 7.280e-10
Identity = 35/120 (29.17%), Postives = 64/120 (53.33%), Query Frame = 0
Query:   10 IKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDFDKNILDA 128
            IKSG L+ + EL+  +P+ + G++ RV G ++       +  I   G  L V T  +   +      G ++ ++GEL     NE +L+AR+ + + G+D++LY   LK+ K+F    ++A
Sbjct:    6 IKSGALVTLQELNPSSPEFKQGASFRVTGMLQDYNLETAIAVIVDEGASLKVDTQHLKLNIRS----GSIYQFIGELHIEPSNEAILKARVGRNVDGLDLNLYRETLKLLKEFQAEQINA 121          
BLAST of Gvermi12407.t1 vs. uniprot
Match: M1A6V6_SOLTU (Uncharacterized protein n=4 Tax=Solanum TaxID=4107 RepID=M1A6V6_SOLTU)

HSP 1 Score: 61.6 bits (148), Expect = 1.200e-9
Identity = 36/116 (31.03%), Postives = 64/116 (55.17%), Query Frame = 0
Query:    7 MPDIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDF 121
            M  I SG L+ ++EL   +   +HG ++RV G+++  +    +  I      L V T  +   +     IG +F ++GEL    +NE +L+AR+ + M G+D++LY + LK+ +DF
Sbjct:    1 MATIASGALINLEELVPSSQHFKHGISLRVTGKLQDYDVETAVAVIVDRNASLKVDTQHLNINL----RIGSIFQFIGELLLEPDNEAILKARVGRNMDGMDLNLYRQSLKLLRDF 112          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A2U1PMI7_ARTAN (Uncharacterized protein n=2 Tax=Anthemideae TaxID=102810 RepID=A0A2U1PMI7_ARTAN)

HSP 1 Score: 61.2 bits (147), Expect = 2.120e-9
Identity = 32/113 (28.32%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   10 IKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDF 121
            I SG ++ + EL++++P  + G+++RV G+++       +  I   G  LAV T  +   +     +G ++ ++GEL  +  NE +L+AR+ + + G+D++LY++ LK+ + F
Sbjct:    6 IPSGAIVMLQELNSFSPQFKDGASLRVTGKLEVYNVETAIAVIADGGATLAVDTQHLRINL----RVGSLYQFIGELSIQPNNEGILKARVGRNVDGMDLNLYEQSLKLVRQF 114          
BLAST of Gvermi12407.t1 vs. uniprot
Match: UPI001895A669 (CST complex subunit TEN1 n=1 Tax=Jatropha curcas TaxID=180498 RepID=UPI001895A669)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-9
Identity = 30/116 (25.86%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    7 MPDIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDF 121
            +P IK G+L+ + +L   +P  + G+++R+ G+++       +  I      L + T  + +  F    IG ++ ++GEL  + +NE++L+AR+ + + G+D+ LY++ L++ + F
Sbjct:    3 LPAIKHGELVMLKDLQPSSPFFKQGASLRITGKLQEYSVETAIAIIVDGNAILKIDTQHLRNLSFR---IGSIYQFIGELHIQSDNEMILQARVGRNVDGIDLSLYNQSLQLLRQF 115          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A2I0WCF3_9ASPA (Uncharacterized protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WCF3_9ASPA)

HSP 1 Score: 60.8 bits (146), Expect = 2.920e-9
Identity = 32/118 (27.12%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   10 IKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDFDKNIL 126
            IK G L+ + EL   +P  + G ++RV G+++       +  I   G  L + T  + D  F    I  ++ ++GEL    + +++L+ARI + + G+D++LY + +++R+ F+ +I+
Sbjct:    6 IKPGLLVALQELQPSSPFFKEGQSIRVTGKLQSYSVESAIAIIVDGGATLLIDTQHLRDINFR---INSIYQFIGELLIPHDGQVVLKARIGRNVDGIDLNLYHQSIRLRRKFEADIV 120          
BLAST of Gvermi12407.t1 vs. uniprot
Match: A0A5N6PFY7_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PFY7_9ASTR)

HSP 1 Score: 60.5 bits (145), Expect = 4.200e-9
Identity = 35/115 (30.43%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    9 DIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLVFIEHHGRELAVHTALIVDPVFGLD-DIGKVFMYLGELE-RFENELLLRARIAKEMKGVDIDLYDRCLKIRKDF 121
            DI SG L+ + E++  +P  + G+++RV G+++       +  I   G  LAV T  +      LD  +G ++ ++GEL  +  NE +L+AR+ + + G+D++LY + LK+ + F
Sbjct:    5 DIPSGSLVILQEVNPTSPHFKQGASLRVTGKLQEYNVDTAIAVIADGGATLAVDTRHL-----RLDLRVGSLYQFIGELSIQPTNEGILKARVGRNVDGMDLNLYQQSLKLLRQF 114          
The following BLAST results are available for this feature:
BLAST of Gvermi12407.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J550_9FLOR7.710e-6070.49CST complex subunit TEN1 n=1 Tax=Gracilariopsis ch... [more]
A0A5P1EDX1_ASPOF2.250e-1431.09Uncharacterized protein n=2 Tax=Asparagus officina... [more]
D8RL68_SELML1.170e-1132.14Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
A0A485LP17_9STRA1.040e-1031.09Aste57867_23900 protein n=1 Tax=Aphanomyces stella... [more]
A0A830DCE5_9LAMI7.280e-1029.17Uncharacterized protein n=1 Tax=Phtheirospermum ja... [more]
M1A6V6_SOLTU1.200e-931.03Uncharacterized protein n=4 Tax=Solanum TaxID=4107... [more]
A0A2U1PMI7_ARTAN2.120e-928.32Uncharacterized protein n=2 Tax=Anthemideae TaxID=... [more]
UPI001895A6692.170e-925.86CST complex subunit TEN1 n=1 Tax=Jatropha curcas T... [more]
A0A2I0WCF3_9ASPA2.920e-927.12Uncharacterized protein n=1 Tax=Dendrobium catenat... [more]
A0A5N6PFY7_9ASTR4.200e-930.43Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 10..122
e-value: 9.3E-20
score: 70.5
IPR029146CST complex subunit Ten1, animal and plant typePANTHERPTHR33905CST COMPLEX SUBUNIT TEN1coord: 9..121
NoneNo IPR availableGENE3D2.40.50.140coord: 10..125
e-value: 5.9E-20
score: 73.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4588053..4588623 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12407.t1Gvermi12407.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4588053..4588623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12407.t1 ID=Gvermi12407.t1|Name=Gvermi12407.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=136bp
MAAAVNMPDIKSGKLMQIDELDNWTPDERHGSAVRVVGRVKGVEFGRQLV
FIEHHGRELAVHTALIVDPVFGLDDIGKVFMYLGELERFENELLLRARIA
KEMKGVDIDLYDRCLKIRKDFDKNILDAIERRNDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029146Ten1_animal_plant