Gvermi12388.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12388.t1 vs. uniprot
Match: Q7XY88_GRIJA (Histone H2A (Fragment) n=3 Tax=Rhodymeniophycidae TaxID=2045261 RepID=Q7XY88_GRIJA) HSP 1 Score: 229 bits (583), Expect = 2.660e-75 Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 1 MSSKTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGDASQEV 124
MS K KKTSQSRSSKAGLQFPVGRI RFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLL GVTIASGGVLPNIHQVLMPRKK+KGDASQEV
Sbjct: 31 MSGKVKKTSQSRSSKAGLQFPVGRIDRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGGVTIASGGVLPNIHQVLMPRKKSKGDASQEV 154
BLAST of Gvermi12388.t1 vs. uniprot
Match: A0A2V3J1H0_9FLOR (Histone H2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H0_9FLOR) HSP 1 Score: 222 bits (566), Expect = 3.600e-73 Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 0
Query: 6 KKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGDASQEV 124
KK +QSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLL VTIASGGVLPNIHQVLMP KK+KGDASQEV
Sbjct: 4 KKAAQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHQVLMPHKKSKGDASQEV 122
BLAST of Gvermi12388.t1 vs. uniprot
Match: R7QQ41_CHOCR (Histone H2A n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ41_CHOCR) HSP 1 Score: 220 bits (560), Expect = 3.600e-72 Identity = 112/124 (90.32%), Postives = 117/124 (94.35%), Query Frame = 0
Query: 1 MSSKTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGDASQEV 124
+S K KKTSQ+RSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKK+RIIPRHIQLAVRNDEELNKLL VTIASGGV+PNIH VLMPRKK+K D SQEV
Sbjct: 5 ISKKVKKTSQTRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGSVTIASGGVIPNIHTVLMPRKKSKSDPSQEV 128
BLAST of Gvermi12388.t1 vs. uniprot
Match: A0A7S0G427_9RHOD (Histone H2A n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G427_9RHOD) HSP 1 Score: 207 bits (527), Expect = 3.870e-67 Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = 0
Query: 4 KTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGDASQE 123
KTKK++ SR+ KAGLQFPVGRIHR LRKGGYADRVGAGAPVY+AAV+EYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIA+GGVLPNIH VL P+KK DASQE
Sbjct: 8 KTKKSAVSRTKKAGLQFPVGRIHRHLRKGGYADRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIAAGGVLPNIHSVLTPKKKEAKDASQE 127
BLAST of Gvermi12388.t1 vs. uniprot
Match: A0A5J4Z1G0_PORPP (Histone H2A n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A5J4Z1G0_PORPP) HSP 1 Score: 205 bits (522), Expect = 2.100e-66 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 0
Query: 4 KTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGDASQEV 124
K +K + SR+ KAGLQFPVGRIHR L+KGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRH+QLAVRNDEELNKLLSGVTIA+GGVLPNIH VLMP+KK K DASQE+
Sbjct: 7 KERKAAMSRTKKAGLQFPVGRIHRHLKKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLSGVTIAAGGVLPNIHAVLMPKKKGK-DASQEL 126
BLAST of Gvermi12388.t1 vs. uniprot
Match: A0A7J7IHZ2_9RHOD (Histone H2A n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHZ2_9RHOD) HSP 1 Score: 196 bits (499), Expect = 5.030e-63 Identity = 94/111 (84.68%), Postives = 107/111 (96.40%), Query Frame = 0
Query: 9 SQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGD 119
++SRSSKAGLQFPVGR+HR+LR GGYA+R+GAGAPVY+AAVMEYLTAEVLELAGNAARDNKKTRI+PRHIQLA+RNDEELNKLL+ VTIASGGVLPNIH VL+P+KK KG+
Sbjct: 7 AKSRSSKAGLQFPVGRVHRYLRDGGYAERIGAGAPVYLAAVMEYLTAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELNKLLANVTIASGGVLPNIHAVLLPKKKGKGE 117
BLAST of Gvermi12388.t1 vs. uniprot
Match: M1V984_CYAM1 (Histone H2A n=2 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V984_CYAM1) HSP 1 Score: 197 bits (501), Expect = 5.170e-62 Identity = 95/111 (85.59%), Postives = 107/111 (96.40%), Query Frame = 0
Query: 9 SQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTKGD 119
++SRSSKAGLQFPVGR+HR+LR GGYA+R+GAGAPVY+AAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLA+RNDEELNKLL+ VTIASGGVLPNIH VL+P+KK KG+
Sbjct: 101 AKSRSSKAGLQFPVGRVHRYLRDGGYAERIGAGAPVYLAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAIRNDEELNKLLADVTIASGGVLPNIHAVLLPKKKAKGE 211
BLAST of Gvermi12388.t1 vs. uniprot
Match: C3ZNL5_BRAFL (Histone H2A n=6 Tax=Branchiostoma TaxID=7737 RepID=C3ZNL5_BRAFL) HSP 1 Score: 194 bits (492), Expect = 7.360e-62 Identity = 94/114 (82.46%), Postives = 107/114 (93.86%), Query Frame = 0
Query: 4 KTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKKTK 117
K + ++SRSS+AGLQFPVGR+HRFLRKG YA+RVGAGAPVY+AAV+EYLTAE+LELAGNAARDNKKTRIIPRH+QLAVRNDEELNKLLSGVTIA GGVLPNIH VL+P+K +K
Sbjct: 9 KARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIHAVLLPKKTSK 122
BLAST of Gvermi12388.t1 vs. uniprot
Match: C3Z7D8_BRAFL (Histone H2A n=8 Tax=Branchiostoma TaxID=7737 RepID=C3Z7D8_BRAFL) HSP 1 Score: 192 bits (487), Expect = 4.400e-61 Identity = 93/111 (83.78%), Postives = 105/111 (94.59%), Query Frame = 0
Query: 4 KTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRK 114
K + ++SRSS+AGLQFPVGR+HRFLRKG YA+RVGAGAPVY+AAV+EYLTAE+LELAGNAARDNKKTRIIPRH+QLAVRNDEELNKLLSGVTIA GGVLPNIH VL+P+K
Sbjct: 9 KARAKAKSRSSRAGLQFPVGRVHRFLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIHAVLLPKK 119
BLAST of Gvermi12388.t1 vs. uniprot
Match: A0A210PR34_MIZYE (Histone H2A n=3 Tax=Protostomia TaxID=33317 RepID=A0A210PR34_MIZYE) HSP 1 Score: 191 bits (485), Expect = 1.150e-60 Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 0
Query: 4 KTKKTSQSRSSKAGLQFPVGRIHRFLRKGGYADRVGAGAPVYMAAVMEYLTAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELNKLLSGVTIASGGVLPNIHQVLMPRKK--TKGDASQ 122
KTK ++SRSS+AGLQFPVGRIHR LRKG YA+RVGAGAPVY+AAV+EYL AEVLELAGNAARDNKK+RIIPRH+QLA+RNDEELNKLLSGVTIA GGVLPNI VL+P+K TKG +SQ
Sbjct: 9 KTKSKAKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTGATKGKSSQ 129 The following BLAST results are available for this feature:
BLAST of Gvermi12388.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12388.t1 ID=Gvermi12388.t1|Name=Gvermi12388.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=125bpback to top |