Gvermi12310.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12310.t1
Unique NameGvermi12310.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length283
Homology
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A2V3IMS5_9FLOR (Hist_deacetyl domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMS5_9FLOR)

HSP 1 Score: 393 bits (1010), Expect = 1.120e-135
Identity = 198/280 (70.71%), Postives = 230/280 (82.14%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQGRRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAP-ICASVAAHCDVYTDLARALRR 279
            MQKYAL+RNQL+QD +LS+ATF  +PLATRVELEA HDASY+ R + GGLS+ EIR +GFPWS AGVRRALASTGGTVAAMRCVL GA +AGQLAGGTHHAR     GFCVFNDVAVA+  AL++G+RVAVLDFDVHQGDGTAE+ +G   + TVSLHA  NYPFEK+ SD+D+ F DG GD+EYL  VE+VVP VLDGF+P V +LQMGVD L  D LGRL+L+R GLSRRNR+VY  +L R ++AVVTMGGGYS P I  SV AHCDVYTD+ARAL +
Sbjct:    1 MQKYALIRNQLEQDTLLSSATFVPSPLATRVELEAVHDASYISRVMNGGLSKHEIREVGFPWSTAGVRRALASTGGTVAAMRCVLKGAKVAGQLAGGTHHARRNGGAGFCVFNDVAVAASIALKEGKRVAVLDFDVHQGDGTAEIFKGVEELYTVSLHAERNYPFEKIASDIDIGFEDGVGDEEYLKVVEDVVPRVLDGFDPDVVMLQMGVDGLESDGLGRLSLSRQGLSRRNRYVYESILEREMQAVVTMGGGYSRPSIWPSVEAHCDVYTDMARALEQ 280          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A7S3C6K0_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C6K0_9CHLO)

HSP 1 Score: 248 bits (633), Expect = 1.530e-77
Identity = 140/278 (50.36%), Postives = 179/278 (64.39%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVL-SNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLN--GAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQGRRVA----VLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFE-KVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVY 270
            MQKY LVR +LQ D  L    +   APL  R ELE  HDA YV R  GGGL+ +E RAIGFPW+P  V+R  AS GGT+AA+R +++  GA +A   AGGTHHA      GFCVFND+AVA++ A    R  A    V+D DVHQG+GTA++  G+ +V T S+H  NNYP++ +  SD+DV   DG  DDEYL A+   +    D  EP + + Q GVDAL++D+ GRLALTR GL RRN  VY   + R  + ++ MGGGYS PI A+V AH DV+
Sbjct:   54 MQKYRLVREELQADASLRGKISIQRAPLIERSELEVVHDADYVGRVFGGGLTAKENRAIGFPWTPKSVQRYRASAGGTLAALRALMSDEGAMVASHAAGGTHHAFRGAGEGFCVFNDIAVAAVTARSFHREEALPILVVDLDVHQGNGTADIFEGDDDVFTFSVHGANNYPWKTRRTSDLDVDVPDGTTDDEYLEALRPSLARAFDSCEPKLVIFQAGVDALSEDSFGRLALTRQGLIRRNNLVYDHCIARGCKLLICMGGGYSRPIGATVDAHADVF 331          
BLAST of Gvermi12310.t1 vs. uniprot
Match: M1UVL9_CYAM1 (Hist_deacetyl domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UVL9_CYAM1)

HSP 1 Score: 244 bits (623), Expect = 8.580e-76
Identity = 139/284 (48.94%), Postives = 175/284 (61.62%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAM-AGQLAGGTHHARXXXXXGFCVFNDVAVASMEALR---QGRRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRR-RVRAVVTMGGGYSAPICASVAAHCDVYTDLARALRR 279
            M KY LVR +L+ D       F  +PLA   ++   H   YV RF+ G LS+ E+R IGFPWS A V+R LAS GGTVA MR V+ G +  A Q+AGGTHHA      GFCVFND+A+A+  ALR   Q RR+ VLD DVHQG+G A + +G+  V T S H   NYPF K +SD+D+ F D   D +YL  +E  +P ++   +P +   Q GVDALA+D LGRLALTR GL  RN+ V   +L+      V+ MGGGY+ PI  SV AH DVY D   AL R
Sbjct:   68 MAKYELVRRKLEADSSFKGVPFLVSPLAELDDILLVHSKDYVDRFIKGKLSDIEVRRIGFPWSTALVQRTLASVGGTVACMRDVVEGRSRCAAQIAGGTHHAFPDHGEGFCVFNDIAIAARVALRDYAQVRRILVLDLDVHQGNGVAAIFQGDSRVFTCSFHGHGNYPFRKQKSDLDIEFEDNTDDTDYLQILEVWLPRIMAKHDPDLVFYQAGVDALAEDKLGRLALTRAGLRLRNQIVLDYILQESEAGIVICMGGGYADPITKSVDAHADVYLDAHFALAR 351          
BLAST of Gvermi12310.t1 vs. uniprot
Match: Q027B1_SOLUE (Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q027B1_SOLUE)

HSP 1 Score: 239 bits (610), Expect = 9.470e-75
Identity = 132/271 (48.71%), Postives = 175/271 (64.58%), Query Frame = 0
Query:    2 QKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQG--RRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVY 270
            QKYA++R++L+ +        T AP A   +LE AH+  YV+  L G +  R +R IGFPWS A VRR LAS GGT+AA R  +  + + G LAGGTHHA      GFCVFND+AVA +   R+G   R AV+D DVHQGDGTA +   + +VLTVS+H  NN+PF K  S +D+  +DG  DDEY++ V+ ++P VL  F+P V + Q GVD LA D LGRLALT+ GL+RR+R V       R+  V+T+GGGYS PI A+  AH + +
Sbjct:   26 QKYAMLRSKLEAEHRFE---LTPAPPAEIAQLELAHEEQYVRAILHGDVDPRVMRRIGFPWSEALVRRTLASVGGTLAASRDAME-SGLGGNLAGGTHHAFRAEGSGFCVFNDLAVAILMLRREGLAARAAVIDLDVHQGDGTASIFESDPSVLTVSIHGENNFPFRKQRSRIDIGLSDGTSDDEYISHVQSMLPVVL-AFQPEVMLYQAGVDGLASDRLGRLALTQQGLARRDRLVLEAARSHRIPLVITLGGGYSEPIEATAEAHANTF 291          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A831M6D5_9BACT (Histone deacetylase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A831M6D5_9BACT)

HSP 1 Score: 235 bits (600), Expect = 2.960e-73
Identity = 140/277 (50.54%), Postives = 169/277 (61.01%), Query Frame = 0
Query:    3 KYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQG--RRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTDLARAL 277
            KY L+R +LQ+D   S   F AAPLA    +  AHDA YV+ F  G LS+  +R IGFPWS   V R LAS GGT+AA           G LAGGTHHA      G+CVFND+AVA   A  +G   RVAV+D DVHQGDGTA M  G+ NVLTVS+H +NN+PF K  S +D+   DGAGD EYLA VEE +  V   F P V   Q GVDALA D LG+L ++  G++ R+R V+ ++    V  VVTMGGGYS PI  +V AH   Y   A  L
Sbjct:   24 KYRLLREELQRD---SRFRFHAAPLAEETTIARAHDARYVREFCDGALSDAAMRKIGFPWSTGLVLRTLASVGGTLAATAAARQ-TGFGGTLAGGTHHAFHAEGSGYCVFNDIAVAIAWARDEGWAHRVAVIDLDVHQGDGTAAMCAGDDNVLTVSVHGKNNFPFRKQRSVLDIELEDGAGDVEYLAGVEEALRRVA-AFAPEVVFYQSGVDALASDRLGKLNVSPEGMAARDRTVFDRVKAWGVPVVVTMGGGYSDPIRLTVEAHAVTYRTAAEVL 295          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A7W1SXL9_9BACT (Histone deacetylase n=1 Tax=Acidobacteriales bacterium TaxID=2282142 RepID=A0A7W1SXL9_9BACT)

HSP 1 Score: 232 bits (591), Expect = 7.640e-72
Identity = 136/278 (48.92%), Postives = 171/278 (61.51%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMR-CVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQG---RRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTDLA 274
            ++KY L+R  L++D       F  AP +TR E+E  H A YV  FL G LS   IR IGFPWS   V+R LAS GGTVAA R  +L G    G LAGGTHHA      GFCVFND+AVA +  LR     RR AV+D DVHQGDGTA + R + +VLT+SLH +NN+P  K +S +DV    G  D+ YLA +  V+P VLD FEP +   Q GVD L  D LG L+LT +GL RR+  V + +L + V  V+T+GGGYS PI  +  AH + +   A
Sbjct:   21 IRKYTLLRRMLEEDGYFQ---FRPAPFSTRTEIELVHGAEYVDGFLNGTLSASAIRRIGFPWSDGLVQRTLASVGGTVAASRNALLQG--WGGTLAGGTHHAFADEGSGFCVFNDIAVA-IRVLRSEDKIRRAAVIDVDVHQGDGTAHIFRDDPDVLTLSLHCKNNFPLRKQQSKIDVELDAGTSDEAYLARLAPVLPRVLD-FEPDIVFYQSGVDGLESDVLGHLSLTLNGLKRRDSMVMSAVLEQHVPFVITLGGGYSDPITLTAEAHANTFRTAA 291          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A359M1Y4_9BACT (Histone deacetylase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A359M1Y4_9BACT)

HSP 1 Score: 231 bits (590), Expect = 1.560e-71
Identity = 136/281 (48.40%), Postives = 169/281 (60.14%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQGR--RVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTDLARALRR 279
            M+KY LVR+ L  D    + +F  APLA    +  AHDA+YVK F+ G L    +R IGFPWS   VRR LAS GGT+ A R  L      G LAGGTHHA      GFCVFND+AVA     R GR  R AV+D DVHQGDGTA +   E +VLT+SLH RNN+PF K  S +DV   D  GD+EYL A+ +V+P V   F P +   Q GVDALA D LGRL+LT  G+  R+R V   +    V  V+T+GGGYS PI  +  AH   +   ++ L++
Sbjct:   23 MRKYRLVRDLLAAD---GHYSFECAPLADTEVVSLAHDAAYVKAFVDGTLPPAVLRRIGFPWSEGLVRRTLASVGGTLGATRDALE-TGYGGNLAGGTHHAFRDEGSGFCVFNDIAVAIESLRRDGRVRRAAVVDLDVHQGDGTALIFEHEPDVLTLSLHGRNNFPFRKQRSKIDVDLPDATGDEEYLRALHQVLPAVF-AFRPEIVYYQSGVDALATDTLGRLSLTAAGMEARDRMVMTAVRAAGVPLVITLGGGYSRPIERTAEAHATTFRVASQVLQQ 298          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A518BLM4_9BACT (Acetoin utilization protein AcuC n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BLM4_9BACT)

HSP 1 Score: 229 bits (583), Expect = 1.190e-70
Identity = 129/282 (45.74%), Postives = 164/282 (58.16%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEAL--RQGRRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTDLARALRRG 280
            M KY  +R +L +  VL  +    AP A    + A HD +YV+ F+ G LS   +R IGFPWSPA V R L S GGT+AA R  L+    AG LAGGTHHA      G+CVFND+AV +   L  R   RVAV+D DVHQGDGTA +  G+  V T+S+H   N+P  K  SD+D+  ADG GD EYL  VE  +  V DG  P + + Q GVD LA+D LGRLALT  GL+ R+  V+ +        V T+GGGY+ P+  ++AAH   Y        RG
Sbjct:   21 MSKYRRLRERLVEAGVLRASELVRAPAAPLDRIGAVHDPAYVRAFIAGNLSREAVRRIGFPWSPALVDRTLGSVGGTLAAARVALD-EGFAGNLAGGTHHAHRDFGSGYCVFNDLAVTARTLLDERAVERVAVVDLDVHQGDGTATLCAGDERVFTLSVHGARNFPSRKQTSDLDLGLADGTGDQEYLELVEAALDRVFDGARPQLVLYQAGVDPLAEDRLGRLALTLDGLAARDALVFERCRAEGAAVVATLGGGYADPLEPTLAAHEGTYRAARSVFDRG 301          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A1Y1HW70_KLENI (Histone deacetylase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HW70_KLENI)

HSP 1 Score: 230 bits (587), Expect = 2.410e-70
Identity = 134/287 (46.69%), Postives = 172/287 (59.93%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNAT-FTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVL----NGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASM-------EALRQGRRVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFE-KVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTDLA 274
            M KYA  R  L+QD  L  A  F  +P+ +  EL   HD  YV+R + G ++  E RA+GFPWS A +RR+LASTGGTVAAM  V+         A  +AGGTHHA      GFCVFND+AVA+        E L     + V+D DVHQG+GTA+M   E  V+T S+H   NYP+  K+ SD DV   D A D+ YL  + + +P +LD + P +   Q GVDAL +D+ GRLA+TR GL +RN  VY + +RR +  V+ MGGGYS P  ASV AH DVY   A
Sbjct:   76 MLKYAATRANLEQDSSLKGAIGFKCSPVCSTEELFRVHDKGYVERVVSGDVTPNEERALGFPWSIALIRRSLASTGGTVAAMHAVMADHPRRRRAASHIAGGTHHAFSGHGEGFCVFNDIAVAAAAALVDYPEQLDSKTPIIVVDLDVHQGNGTAKMFEAEPRVVTFSMHGEKNYPWRSKMTSDHDVEMPDDADDELYLRTLGQWLPYLLDTYAPRLVFFQAGVDALKEDSFGRLAMTREGLLKRNNMVYTECIRRGLPLVICMGGGYSRPYDASVLAHSDVYRSAA 362          
BLAST of Gvermi12310.t1 vs. uniprot
Match: A0A2V8EN17_9BACT (Histone deacetylase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8EN17_9BACT)

HSP 1 Score: 227 bits (578), Expect = 7.860e-70
Identity = 135/275 (49.09%), Postives = 162/275 (58.91%), Query Frame = 0
Query:    1 MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGLSEREIRAIGFPWSPAGVRRALASTGGTVAAMRCV-LNGAAMAGQLAGGTHHARXXXXXGFCVFNDVAVASMEALRQGR--RVAVLDFDVHQGDGTAEMLRGERNVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGFEPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVTMGGGYSAPICASVAAHCDVYTD 272
            M KY L+R +L ++ VL  A       A   +L   HDA+YV    GG L     R IGFPWSP  V R+  S G T+AA R V L GA+++  LAGGTHHA      G+CVFNDVAVA+   LR G   RVAV+D DVHQG+GTA + RGE  V T S H  NN+PF K  SD+DV F DGAGDDEYLAA+E  VP VLD   P +     G D    D LGRL LT  GL  R+R V+     RR+ AVV M GGY+  + A VA H +   +
Sbjct:   21 MAKYRLLRERLVEERVLDTADLAVPEAAAWGDLRLVHDAAYVDAVAGGTLPADAQRRIGFPWSPMMVERSRRSVGATIAAAREVMLGGASVSANLAGGTHHAFRDRGEGYCVFNDVAVAAAVMLRSGAAARVAVVDCDVHQGNGTAAIFRGEPAVFTCSFHGANNFPFRKETSDLDVTFDDGAGDDEYLAALEAHVPAVLDRHRPDLVFYLAGADPYEGDRLGRLGLTIDGLRARDRLVFEACRARRLPAVVVMSGGYAPDVDAIVAIHVNTIRE 295          
The following BLAST results are available for this feature:
BLAST of Gvermi12310.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMS5_9FLOR1.120e-13570.71Hist_deacetyl domain-containing protein n=1 Tax=Gr... [more]
A0A7S3C6K0_9CHLO1.530e-7750.36Hypothetical protein (Fragment) n=2 Tax=Chloropico... [more]
M1UVL9_CYAM18.580e-7648.94Hist_deacetyl domain-containing protein n=1 Tax=Cy... [more]
Q027B1_SOLUE9.470e-7548.71Histone deacetylase superfamily n=1 Tax=Solibacter... [more]
A0A831M6D5_9BACT2.960e-7350.54Histone deacetylase n=1 Tax=Bryobacteraceae bacter... [more]
A0A7W1SXL9_9BACT7.640e-7248.92Histone deacetylase n=1 Tax=Acidobacteriales bacte... [more]
A0A359M1Y4_9BACT1.560e-7148.40Histone deacetylase n=1 Tax=Bryobacterales bacteri... [more]
A0A518BLM4_9BACT1.190e-7045.74Acetoin utilization protein AcuC n=1 Tax=Planctomy... [more]
A0A1Y1HW70_KLENI2.410e-7046.69Histone deacetylase n=1 Tax=Klebsormidium nitens T... [more]
A0A2V8EN17_9BACT7.860e-7049.09Histone deacetylase n=1 Tax=Acidobacteria bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase familyPRINTSPR01270HDASUPERcoord: 202..212
score: 42.66
coord: 96..119
score: 45.27
coord: 128..143
score: 52.88
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20Histone deacetylase domaincoord: 1..277
e-value: 2.0E-65
score: 223.1
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 3..265
e-value: 2.8E-49
score: 168.2
NoneNo IPR availablePANTHERPTHR43497HISTONE DEACETYLASE 11coord: 1..274
NoneNo IPR availablePANTHERPTHR43497:SF4HISTONE DEACETYLASE SUPERFAMILYcoord: 1..274
IPR044150Histone deacetylase 11CDDcd09993HDAC_classIVcoord: 1..270
e-value: 7.50003E-105
score: 304.42
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 2..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4161453..4162301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12310.t1Gvermi12310.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4161453..4162301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12310.t1 ID=Gvermi12310.t1|Name=Gvermi12310.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=283bp
MQKYALVRNQLQQDDVLSNATFTAAPLATRVELEAAHDASYVKRFLGGGL
SEREIRAIGFPWSPAGVRRALASTGGTVAAMRCVLNGAAMAGQLAGGTHH
ARRGGGGGFCVFNDVAVASMEALRQGRRVAVLDFDVHQGDGTAEMLRGER
NVLTVSLHARNNYPFEKVESDVDVAFADGAGDDEYLAAVEEVVPDVLDGF
EPHVAVLQMGVDALADDALGRLALTRHGLSRRNRFVYAQLLRRRVRAVVT
MGGGYSAPICASVAAHCDVYTDLARALRRGGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse
IPR037138His_deacetylse_dom_sf
IPR023801His_deacetylse_dom
IPR044150HDAC_classIV
IPR023696Ureohydrolase_dom_sf