Gvermi12245.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12245.t1
Unique NameGvermi12245.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length490
Homology
BLAST of Gvermi12245.t1 vs. uniprot
Match: A0A2V3J048_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J048_9FLOR)

HSP 1 Score: 596 bits (1536), Expect = 2.270e-208
Identity = 280/466 (60.09%), Postives = 355/466 (76.18%), Query Frame = 0
Query:   20 LPPK-VNGGRAYRIPKTWNRLHSPWLKKNAPELKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVGFYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGCTPVGGQWPDERNLYDCHMCDKPLQNGTLNIESIVEIPSILLSSNCPS-FSWCRAKLERFLEKNSISNTIFQLPASICSPQKTDANFLATRNLFYTKYWNKHGRLPWRHTHDVSKNLQSQSKRGLLLSPRELNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRDEDWWTSLILS---TIQDDPFSSGGWEEKFKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRGVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYFSLSTFRWYWEAYAFANEDSARHSLHGSKET 480
            +PP+ VNGG  +RIP TWNRL SPWLKK   +  NPKQSR+RYLYGPSRLM+SDGIGHSM A+N+EYNLALN+NLTYTHRVGFYSSLSR +R AVE+FFGWG+GEV R+ +Q+ GC+P GG+WPDE ++Y CH+CDKPL NG++NI+ +++IP + L + C +  + C  KL  F++ NS+S++IFQLP   CSP  TDANFL T+ +F+ KYW KHG+LPW  T   +   +S ++R + L+PRELN+AIH RRGDFLK   GR +T D  FA ++  VL ++ N G   + M +A+H+YSEG+L  + A STH+V+LQDK YYD+ G  R+E WW SLILS   T+++   S   WEEK +VK H+SEDTL SLHNMIAADVFIGS SGLSTHLV S+SRGV+L+PHSS ID EIGKKGY+CCS+PF N++G FSLSTF WYW AY  AN DSA +S  G  +T
Sbjct:   65 IPPRYVNGGIIFRIPGTWNRLLSPWLKKPEVKFLNPKQSRYRYLYGPSRLMTSDGIGHSMGAINMEYNLALNLNLTYTHRVGFYSSLSRGDRFAVEDFFGWGVGEVRRKKVQEQGCSPKGGRWPDEEDMYACHVCDKPLHNGSMNIKKVLDIPDVFLDAGCQNPEALCWKKLYEFMQNNSLSHSIFQLPEKTCSPPNTDANFLKTKEIFFNKYWKKHGQLPWMATDGYT---ESNTQRRITLNPRELNIAIHSRRGDFLKPEIGRTLTNDTTFAAVLHEVLRVIQNTGTVFSFMPVAVHVYSEGKLLKEKALSTHSVELQDKNYYDNEGLARNEKWWKSLILSRLRTLKNHGPSKVRWEEKLRVKFHISEDTLSSLHNMIAADVFIGSHSGLSTHLVRSMSRGVNLLPHSSGIDTEIGKKGYICCSVPFNNDNGVFSLSTFEWYWRAYVSANVDSAWYSFKGHGDT 527          
BLAST of Gvermi12245.t1 vs. uniprot
Match: R7QBV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBV6_CHOCR)

HSP 1 Score: 467 bits (1201), Expect = 4.610e-157
Identity = 222/453 (49.01%), Postives = 309/453 (68.21%), Query Frame = 0
Query:   22 PKVNGGRAYRIPKTWNRLHSPWLKKNAPELKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVGFYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGCTPVGGQWPDERNLYDCHMCDKPLQNGTLNIESIVEIPSILLSSNCPSFSWCRAKLERFLEKNSISNTIFQLPASICSPQKTDANFLATRNLFYTKYWNKHGRLPWRHTHDVSKNLQSQS-KRGLLLSPRELNVAIHVRRGDFL--KAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRDEDWWTSLILSTI-QDDPFSSGGWEEKFKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRGVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYFSLSTFRWYWEAYAFANEDSA 470
            P++NGG  + +P +WNRLH+PW + +A +L  PK+S HRYLY  +R+ +SDGIGHSM  VN ++N A+++ LTYTHR+G YSSL+ ++R AVE FFGWG GEVPR  IQ++GC P GG WP+      CH C++P  +G L I+++VEIP+ + S+       C++  +RFL ++  S+TIFQ     CSP  TD NFL +++LF+ KYW++HG  PW       +NL +Q+ +R +  +P ELNVAIH+RRGDFL  +  + R +TKD+VFA ++   L++V   GG  +EM I +HIYSEG+L+  +  S H ++LQD  YYD +G PR+  WW SLIL T+ + +       +E+  V  H+SEDTL  LH M++AD+FIGS SGLS  LVWSLSRGV L+P++ +I+ E GKKG +CCSIPF NEDG F    F  YW AY+ AN +SA
Sbjct:  116 PRINGGLVFNVPASWNRLHAPWFQPDAVKLLTPKESNHRYLYAATRISTSDGIGHSMGVVNRDFNFAISLKLTYTHRLGTYSSLTFEDRNAVEAFFGWGSGEVPRTKIQQEGCVPQGGFWPEPNQTTACHTCERPRISGALRIQNLVEIPADMRSNCLHPDDPCQSYRKRFLNEHQESHTIFQASRKACSPPATDNNFLVSKSLFFHKYWDQHGLRPWH-----PRNLTTQAGERPIRYNPEELNVAIHIRRGDFLIPETQAKRGITKDEVFAKVLINALSVVQKEGGVFSEMPIVVHIYSEGRLQKGSVLSIHMIELQDNLYYDSSGTPRNAVWWKSLILKTLSRSNAIELESLKERLTVLFHISEDTLLCLHEMVSADIFIGSKSGLSNALVWSLSRGVVLIPYAPTINIEKGKKGNVCCSIPFANEDGIFDTKQFSMYWNAYSQANSESA 563          
BLAST of Gvermi12245.t1 vs. uniprot
Match: A0A2V3IXN9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN9_9FLOR)

HSP 1 Score: 261 bits (666), Expect = 5.080e-77
Identity = 164/498 (32.93%), Postives = 252/498 (50.60%), Query Frame = 0
Query:   24 VNGGRAYRIPKTWNRLHSPWLKKNAPELKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVGFYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGCTPVGGQWPDERNLYDCHMCDKPLQNGTLNI---ESIVEIPSILLSSN--CPSF------SWCRAKLERFLEKNSISNTIFQLPASICSPQKTDANF-LATRNLFYTKYWNKHGR-------LPWRHTHD-------VSKNLQSQSKRGLLLSPRELNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRDEDWWTSLILSTIQDDPF------SSGGWEEK--------FKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRGVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYF--SLSTFRWYWEAYAFANEDSARHSLHGSKE 479
            ++  +  ++P   NR  +PW         +  +SRHR LY P R  S +G+GHS   +N E   AL + LTYTHR+  Y SL+     AVE FFGWG  ++PR  I++  C      +P     ++C +C+  + N +++    + +V +P  L  S   C +         C      FL+ ++ S+TIFQ+P   C    TD +   ATR+  + +YW++HG+       L +R  +        + +   +  KR +  +   LN+AIH RRGDF K    RK+   + F  ++  ++ +V   GG+ AEM + +HIYSEG L   +  + H V   DK+Y D  G  RDE W T +I  + + +P       S+ G + +         +VK H++ DTL SLH MIAADVFIGS SG+  H+V +LSRG+ ++P   S  N        CCS+ F +E G    S+     +W+ +A ANE  A  +L  SK+
Sbjct:   80 LDESKIKKVPALRNRFDTPWYVPKRARFLSLAESRHRVLYSPLRSRSGNGLGHSFSVMNAEIGAALRLGLTYTHRISSYGSLTMGEPSAVEHFFGWGHEQIPRSFIRESFCKSSFDGFP-----HNCEVCEALMSNDSISFMHFQELVNLPRNLTYSRIACSTIRDAHKREACFLSQAAFLKAHNKSHTIFQMPVDSCGSNPTDGHVDQATRSYLFHQYWSRHGKRKNDDYHLEFRERNQRTVYRGGIPRLQFTGRKRAIGHAEDVLNIAIHARRGDFFKV--NRKMVSTRAFGVVVRSMMEVVQRRGGAFAEMAVVVHIYSEGALMEGSEKALHDVSKMDKRYRDSDGTIRDEAWVTRVIRGSGKSEPRRASSNKSASGNDTRAVALFPGGLQVKFHIAADTLTSLHEMIAADVFIGSLSGMGLHVVTTLSRGIHVMPRRVSTFN------MECCSVGFDSESGRIDDSMEHVEMFWDGFARANEACAWRALATSKK 564          
BLAST of Gvermi12245.t1 vs. uniprot
Match: A0A2V3IXX1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXX1_9FLOR)

HSP 1 Score: 244 bits (624), Expect = 2.960e-71
Identity = 163/490 (33.27%), Postives = 237/490 (48.37%), Query Frame = 0
Query:   24 VNGGRAYRIPKTWNRLHSPWLKKNAPELKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVGFYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGCTPVGGQWPDERNLYDCHMCDKPLQNGT---LNIESIVEIPSILL---------SSNCPSFSWCRAKLERFLEKNSISNTIFQLPASICSPQKTDANF-LATRNLFYTKYWNKHGRLPWRHTHDVSKN------------LQSQSKRGLLLSPRE-LNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRDEDWWTSLILSTIQDDP-----FSSGGWEEK-----------FKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRGVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDG-YFSLSTFRWYWEAYAFANEDSA 470
            ++  +  ++P T NR  +PW           ++SR+R LY P R ++SDG+GH+   +N E  +AL + LTYTHRV  Y SL+RDN  AVE FFGWG G++PR  I++  C   G       +   C  C+    N +   +    +VEIP  L           S     S C  +   F+E+++   TIFQ+P   C+    D+ F   TR   + +YW++HG      T D  K             L++  +R  +  P   LN+AIH RRGDF    + R +     F   +   +TIV   GG  + M + +H+YSEG     + +  H V    K Y D  G  RD  W T +I      +P      +S     K            KV+LH++ +TL+SLH MIAAD+FIGS SG+S H+V ++SRGV LVP  S +    G+    CC   F  ++G      +   +W+A+ FANE SA
Sbjct:   41 IHASKIRQVPATSNRFDNPWYVHKRVRFPTLEESRYRVLYSPLRGVASDGLGHNSGVMNAEIGIALRLGLTYTHRVSLYGSLTRDNPNAVENFFGWGHGQIPREFIRESFCKSSGNF-----SRAKCQPCEGLKSNSSFHEMKFHHLVEIPYNLTYGRMWCSRSGSPLHESSNCMKQANDFVERHNQPYTIFQMPLDTCASNPVDSFFDPVTRAYLFNQYWDRHGSRSRYSTEDDEKKSSVRFTKEGIPLLRATVRRRPISYPEHALNIAIHARRGDFFME-TRRSMVSTAAFGRTVRDFMTIVQKQGGVFSRMPVIVHLYSEGINVKGSKYGGHDVSGMAKSYKDSDGTDRDAGWVTKVIRGIGLSEPEVQSSVNSTSASRKNAPRLSLFPGGLKVQLHIATNTLQSLHEMIAADMFIGSASGMSMHVVATMSRGVHLVP--SFLTTYSGE----CCHSAFDPQNGGLHDPQSVAKFWKAFTFANEASA 518          
BLAST of Gvermi12245.t1 vs. uniprot
Match: R7QEY8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEY8_CHOCR)

HSP 1 Score: 248 bits (632), Expect = 6.840e-71
Identity = 157/456 (34.43%), Postives = 230/456 (50.44%), Query Frame = 0
Query:   37 NRLHSPWLKKNAPELKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVGFYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGC--TPVGGQWPDERNLYDCHMCDKPLQNGTLNIESIVEIPSILLSSNCPSFSWCRAKLERFLEKNSISNTIFQLPASICSPQKTDANFLATRNLFYTKYWNKHGR-----LPWRHTHDVSKNLQSQ-SKRGLL-LSPRELNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRDEDWWTSLIL--------STIQDDPFSSGGWEEKFKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSR-GVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYFSLSTFRWYWEAYAFANEDSARHSL 474
            NR   PWL       ++  +S +R LY P +  +S GIGH +  +N E + A+ + L+YTHRVG Y S+SR   +AVE+ FGWG  EVPR+ IQ   C  TP+  + P E     C +C    ++  + I +IVE+PS ++S  C S    R  +  FL ++  ++T+FQ+  S C       +F  +   FY KYW+ HG      LP     +  +      +KRG + L   ELN+ IH RRGDF    + RK+   KVFA +  R + IV  VGG  +EM +AI +YSEG+ +       H      K++ D  G  RD  W  SL +        ++   D      +    +V+  +S D + ++H M AAD+FIGS S LS + V  +SR G+ ++P         G  G  CC+  F  E G    S+   YW  Y+ ANE+SA  S+
Sbjct:  240 NRFDIPWLLLPRITTRSFAESGYRVLYSPMKEKASGGIGHGLTVLNAELSTAITLGLSYTHRVGIYGSMSRAQPLAVEDLFGWGAREVPRKFIQDKVCEVTPLSHKTPPEHGSESCPVCRTIRKDSPVPIRNIVEVPS-MISYGCTSCHRTRIAVGNFLAEHGKNHTLFQMSPSRCDRSPKSPDFSLSYRFFYWKYWDLHGNRTIGGLPVSAVREEGRKWTVPVTKRGPVNLIEDELNIVIHARRGDFF-THTNRKMVSAKVFAAVANRSMEIVQKVGGIFSEMPVAIILYSEGRERNGTVGELHEQSALSKEFVDTDGTIRDAIWLHSLFMPCEASLTGNSSHTDRAVGSSYPNGLRVETRISSDVVHAIHEMAAADIFIGSASDLSQYAVRVISRAGMQILPEYQ------GAMGQ-CCATRFDVESGRVLKSSLEEYWRLYSIANEESAIRSM 686          
BLAST of Gvermi12245.t1 vs. uniprot
Match: R7QPD3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPD3_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 2.530e-30
Identity = 98/291 (33.68%), Postives = 144/291 (49.48%), Query Frame = 0
Query:  205 LPASICSPQKTDANFLA-TRNLFYTKYWNKHGRLPWRHTHDVSKNLQSQSK----------------RGLL--LSPRELNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTIVHNVGGSLAEMKIAIHIYSEGQLKTKNAFST-HAVQLQDKKYYDHTGEPRDEDWWTSLILSTIQDDPFSSGGWEEKFKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRG-VSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYFSLSTFRWYWEAYAFANEDSARHSL 474
            +P  +C+   T + FL   R  FY KYW  HG      +   S+ + S  +                RG+L  L   EL +AIH RRGDF K   GR +     F+ ++ +V+  +     + A M IA+HIYSEG  K        H ++  +  ++D  G+  D    T +     QDD      +  + +V LHVS+DT+ SLH MIAAD+F+GS SG+S HLV SL+RG + L+P  + I++    +G++    P     G   L   R YW  Y+ ANE SA+ +L
Sbjct:    1 MPHKVCAKSPTYSKFLPEARAFFYHKYWAAHGMYSEHDSRHRSRAISSFHRYRDSWASTLRIPGVPPRGILPRLHEHELTIAIHARRGDFFKV--GRPMVPVATFSRVLRQVMAEIQEHNKTFARMPIAVHIYSEGNPKKGYKGDVGHDIKRLNSDFHDADGKVLDVVAVTEIFNDKKQDD--LGIVFRNRLRVVLHVSQDTVESLHEMIAADLFLGSMSGMSLHLVGSLNRGAMQLLP--TRIEHTDEWRGHVKFD-PRTGHIGKKELKGMRRYWREYSDANEKSAKRAL 284          
BLAST of Gvermi12245.t1 vs. uniprot
Match: R7Q8K8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8K8_CHOCR)

HSP 1 Score: 58.9 bits (141), Expect = 3.360e-7
Identity = 27/48 (56.25%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  374 EKFKVKLHVSEDTLRSLHNMIAADVFIGSDSGLSTHLVWSLSRGVSLV 421
            ++ +V+LH+SEDTL S+H MIAADVF+GS S +S+  +++LSRGV L+
Sbjct:   14 KELEVQLHISEDTLNSMHEMIAADVFMGSASSMSSGPLYTLSRGVRLL 61          
The following BLAST results are available for this feature:
BLAST of Gvermi12245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J048_9FLOR2.270e-20860.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBV6_CHOCR4.610e-15749.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IXN9_9FLOR5.080e-7732.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXX1_9FLOR2.960e-7133.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEY8_CHOCR6.840e-7134.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QPD3_CHOCR2.530e-3033.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q8K8_CHOCR3.360e-756.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3962223..3963692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12245.t1Gvermi12245.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3962223..3963692 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12245.t1 ID=Gvermi12245.t1|Name=Gvermi12245.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=490bp
MLKYTATYFDDHDTGLKSRLPPKVNGGRAYRIPKTWNRLHSPWLKKNAPE
LKNPKQSRHRYLYGPSRLMSSDGIGHSMCAVNLEYNLALNMNLTYTHRVG
FYSSLSRDNRMAVEEFFGWGIGEVPRRNIQKDGCTPVGGQWPDERNLYDC
HMCDKPLQNGTLNIESIVEIPSILLSSNCPSFSWCRAKLERFLEKNSISN
TIFQLPASICSPQKTDANFLATRNLFYTKYWNKHGRLPWRHTHDVSKNLQ
SQSKRGLLLSPRELNVAIHVRRGDFLKAASGRKVTKDKVFATIITRVLTI
VHNVGGSLAEMKIAIHIYSEGQLKTKNAFSTHAVQLQDKKYYDHTGEPRD
EDWWTSLILSTIQDDPFSSGGWEEKFKVKLHVSEDTLRSLHNMIAADVFI
GSDSGLSTHLVWSLSRGVSLVPHSSSIDNEIGKKGYLCCSIPFKNEDGYF
SLSTFRWYWEAYAFANEDSARHSLHGSKETHVMPNAVSL*
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