Gvermi12151.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A2V3IMI2_9FLOR (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR) HSP 1 Score: 497 bits (1279), Expect = 5.200e-174 Identity = 242/350 (69.14%), Postives = 289/350 (82.57%), Query Frame = 0
Query: 16 LVGRAFSTKPKQPPPDTPNNRSFE-LPCATQPARFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTGRYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADDS 364
L+ R FST + P++ S LPCATQPARF+VS A RLDRFIK SAPGLPPGLIHRHIRQSRV INGR+ER R+TPVRT+D+I+FPG VKLGL+RRKKRPPPDDVSL+EAM+V+ WLL+RDAR A LNKPPGLPV+A T+RTLEQLLC LG+GRYWLVHRLQ ++GG +LVARDV AA LL+D+FR RMVTR++WGLVAGVP+HK+G+IDIDI G+KA+T+YRVVQMVD+HY+WLE EPRTGR NQLS HCAEGLGTP+VGD + ++ QHP+ GALQLCSRSITFPRLTQ ++S ++ + DL+TV APLP HM+DTW+RLG+QERFA S
Sbjct: 12 LLPRPFSTSARGA--SGPSSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPI-TGALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFASYS 358
BLAST of Gvermi12151.t1 vs. uniprot
Match: R7QAD7_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR) HSP 1 Score: 322 bits (825), Expect = 1.420e-104 Identity = 171/335 (51.04%), Postives = 215/335 (64.18%), Query Frame = 0
Query: 48 RFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTGRYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGD--------RGFDGMRETQHPVDVGALQLC-------SRSITFPRLTQVNSSNRQRHR------GRSPDLVTVDAPLPPHMRDTWRRLGMQERFA 361
+++V+ GSRLDRFIK APG+PPGLI R IR+ + + R + PVRT D+++FPG +KLGLSR K++P PDD+SLAE+ +VK W+L+RDAR LNKP GLP TR LE LL G+G GRYWLVHRL E+GG I+VARDV AA LL++ FR R+V + +W LV G + K G ID+ I GK+A T YRV+Q +D + WLEL PRTGR +QL IHCA+GLGTPIVGD G DG VD G L L SR I FP+LTQ S +R + G +T APLPPHM+DTW+R G++E FA
Sbjct: 70 KWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPTQGGSS-VGTRHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQN-----VDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFA 398
BLAST of Gvermi12151.t1 vs. uniprot
Match: UPI001C67F426 (RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426) HSP 1 Score: 164 bits (416), Expect = 4.060e-44 Identity = 116/340 (34.12%), Postives = 167/340 (49.12%), Query Frame = 0
Query: 41 PCATQPARFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGK-------------------KAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDG---MRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
P AT V+P + +RLDR+ + P L G + + +R ++ ++G+ T + I P + G + R PP VS EA ++++ +LYRDA V LNKP GL V P TR L+ +L L G R LVHRL + GV+++AR +AAA L+ FR R V +I+W + G P G ID+ + + +AVT YRV+ +WLEL P TGR +QL +HCA+GLGTPI+GD + G M E P+ L L +R++ P ++ V APLPPHM +T+ LG
Sbjct: 13 PAATAIQHRSVAPEEADTRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGK-RAEAGTRLLAGQQIRIP-PLPEGPALEAPRRPPRPVSPEEARLLERMVLYRDASVIVLNKPHGLAVQGGPG--LTRHLDAMLDALRFGQEERPRLVHRLDRDTSGVLVLARSAAAAAKLAAAFRGRDVEKIYWAVAVGRPAPAAGRIDLPLARQSGPRGERTAPAEPGADKAARAVTDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCAQGLGTPILGDGKYGGAAAMIEGLPPL----LHLHARALRLPH--------------PEGGVLEVAAPLPPHMEETFAFLG 330
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A8J2ZBU1_9PROT (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT) HSP 1 Score: 163 bits (413), Expect = 1.090e-43 Identity = 114/326 (34.97%), Postives = 162/326 (49.69%), Query Frame = 0
Query: 51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDI---------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMR---ETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
V+P + RLDR+ + P L G + + +R +V ++GR ST +R I P + G +R P VS +A ++++ +LYRD V ALNKP GL V P TR L+ +L L G R LVHRL + GV+L+AR +AA+ L+ FR R + +W +V G P + G ID+ + GG +A+T YRV+ +WLEL P TGR +QL +HCA GLGTPI+GD + G E P+ L L +R++ P ++ V APLPPHM T+ LG
Sbjct: 26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPG--LTRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAAAQIEGLPPL----LHLHARALRLPH--------------PEGGMLEVAAPLPPHMEQTFAFLG 329
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A843RKL5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKL5_9PROT) HSP 1 Score: 162 bits (409), Expect = 5.730e-43 Identity = 116/332 (34.94%), Postives = 161/332 (48.49%), Query Frame = 0
Query: 51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDI----------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-----LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQE 358
V A SG RLDR+ K P L G + + +R+ + ++GR + S + ++ P + + R P VS EA ++ +LYRDA + AL+KP GL V R L+ +L L G R LVHRL + GV+L+AR+ A L+ FR + +I+W LVAGVP +RGVID+ D GK A T ++VV+ SWL L P TGR +QL +HCA +GTPIVGD + G + A L L +R + P +V ++ R V APLPPHM TW+ LG E
Sbjct: 14 VEAAASGQRLDRWFKQHYPQLTHGRLEKMLRKGEIRVDGR-RVKASERLEEGQVVRVPPIPETAPAERPAAPAALAVSAKEAAALQAAVLYRDANIIALDKPAGLAVQGGSGQR--RHLDGMLEALRFGAEERPRLVHRLDRDTAGVLLLARNAPTARALTAAFRGKETQKIYWALVAGVPAERRGVIDLPLAKQAQSRGEAMAADDDAGKPARTFFQVVESYRRAASWLVLLPLTGRTHQLRVHCA-AMGTPIVGDGKYGGREAFPAALAKAAPAAKTLHLLARELALPD-PEVGTTLR------------VTAPLPPHMAATWKALGFNE 328
BLAST of Gvermi12151.t1 vs. uniprot
Match: UPI0010801F87 (RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87) HSP 1 Score: 157 bits (398), Expect = 1.560e-41 Identity = 107/318 (33.65%), Postives = 158/318 (49.69%), Query Frame = 0
Query: 59 RLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG------------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
RLDR+ + P L G + + +R ++ ++GR +T + + P + R RPP VS +A +++ +++RD V AL+KP G+PV P TR+L+ LL L G R LVHRL + GV+L+AR +AAA L+ FR R V + +W +V G P + G IDI + G A+T +R + +WLEL+P TGR +QL +HCAEGLG PI+GD + G + GAL L +R++ P ++ V APLPPHMR+T+ G
Sbjct: 16 RLDRWFRRHFPRLTQGALQKMLRTGQIRVDGR-RAEAATRLAPGQEVRIPPLPEGPAPERPARPP---VSEQDARALERLVIHRDDSVIALDKPHGMPVQGGPG--ITRSLDALLDALRFGHAERPRLVHRLDRDTSGVLLLARTPAAAAALARAFRGRDVEKTYWAVVVGEPTPREGRIDIALARLGGPHGERTQAVDDPKQGAHAITDFRTLDAARRRAAWLELKPLTGRTHQLRVHCAEGLGCPILGDGKYGGAAAHLEGLP-GALHLHARALRLPH--------------PEGGMLEVAAPLPPHMRETFAFFG 312
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A6N2DTI8_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6N2DTI8_9PROT) HSP 1 Score: 157 bits (396), Expect = 2.470e-41 Identity = 113/343 (32.94%), Postives = 162/343 (47.23%), Query Frame = 0
Query: 51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPP-----PDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG--RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGD------RGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADDS 364
V+ A +G RLDR+ + P + GL+ + +R +V ++G + + + P K + K RPP PD ++A+ ++ +LY DA + ALNKP GL V + T ++ LL GL G R LVHRL + GV++VAR AAA L+ FR+R +++W +V GVP+ G ID+ + G +A+T YRVV +WL LEP TGR +QL +HCA +GTPI+GD F G + Q V + A R+IT PR T+ APLPP + TW G D S
Sbjct: 6 VADADAGLRLDRWFRRHFPDVGHGLLEKWLRSGQVRVDGH-RAKAGARLTAGQRVRIPPHAKDHANNPKARPPAPAAPPDPRAIAD---LEARILYEDAAIIALNKPAGLAV--QGGSGTRHHVDALLPGLSRGGERPRLVHRLDKDTSGVLVVARTAQAAAALTRAFRSRATRKLYWAIVVGVPEPPAGRIDLPLAKRAGSGGERVAPDRDQGLRAITDYRVVARAGRRAAWLALEPVTGRTHQLRVHCA-AIGTPILGDGKYGGAASFPGQQWRQARVHLHA-----RAITLPRA--------------DGGTTTITAPLPPDLMRTWSFFGFTAEETDAS 322
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A564WGK8_9PROT (Pseudouridine synthase n=1 Tax=Candidatus Defluviicoccus seviourii TaxID=2565273 RepID=A0A564WGK8_9PROT) HSP 1 Score: 157 bits (397), Expect = 2.640e-41 Identity = 111/327 (33.94%), Postives = 162/327 (49.54%), Query Frame = 0
Query: 51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTD--DLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG--RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGM 356
V A +G RLDR+ K P +P GL+ + +R +V ++G+ R S R + ++ P V R PP S A+A+ +K+ +LYRD + L+KP GL V + + L+ +L L G R LVHRL + GV+++AR ++AA L FR R V +++W LV GVP G I + G AVT YRV++ + +WLELEP TGR +QL +HC + LGTPI+GD + G + +G L L +R+I + + V APLP HMR+TW LG+
Sbjct: 17 VGDAEAGLRLDRWFKRHYPQVPHGLLEKWLRTGQVRLDGK---RVSAGARVEAGQIVRVP-PVPAXXXRPTAANPPVPPSQADALALKRAVLYRDDDMIILDKPAGLAV--QGGTGLAQHLDGMLDVLAVGGERPRLVHRLDKDTSGVLVLARSAASAAALGQAFRGRAVRKLYWALVVGVPPEDVGEIRAPLAKDGSAGSERVGVDRVHGAMAVTHYRVLERIGRRAAWLELEPETGRTHQLRVHC-QVLGTPILGDGKYGGRAAFLNEAGIGRRLHLHARAIAVVLPAK--------------PAIVVAAPLPTHMRETWAFLGL 322
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A1Z9J471_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT) HSP 1 Score: 156 bits (395), Expect = 3.460e-41 Identity = 103/322 (31.99%), Postives = 162/322 (50.31%), Query Frame = 0
Query: 57 GSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDI---------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA--LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQE 358
G RLDR++K PGL G + + +R ++ ++G + S + + P + + P S A+ ++++ +L++D V ++KP GL V + +TTR L+ +L L G R LVHRL + GV+++AR AA LL++ FR++ +++W +V GVP+ G I++ D GK A++ YRV++ +WL LEP TGR +QL +HCA LGTPI+GD + G D A L L +R+I P S ++ V APLP HM+ TW+ LG +E
Sbjct: 15 GMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDGGRAKSNSRLISGQSVRMPP--LNADTANPSADRAPARASKADKLMLESAILHQDHHVLVIDKPAGLAV--QGGSKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIPN--------------PSGGMLVVSAPLPDHMKKTWKLLGFEE 317
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A7V7KAL1_9PROT (Pseudouridine synthase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A7V7KAL1_9PROT) HSP 1 Score: 155 bits (391), Expect = 8.810e-41 Identity = 114/326 (34.97%), Postives = 161/326 (49.39%), Query Frame = 0
Query: 59 RLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFP---GEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDI--------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADD 363
RLDR+ K P + G + + +R +V ++G + T + + P GE +L P P S AE + +++RD V A+NKPPGL V + +T+R ++ +L L G R LVHRL + GV+LVAR +AAA L+ FR++ + +++W +V GVP+ GV+D+ + GGKKAVT YRVV V +WL LEPRTGR +QL +H A L TPI+GD + G V L L +R+I P + + V A LP HM TWR LG R DD
Sbjct: 2 RLDRWFKRHFPQVTHGRLQKWLRTGQVRVDGG-RAKAGTRLEAGQRMRVPPMSGERELPAHAP---PSPTKASAAETDFLLNLVVHRDDHVIAINKPPGLAV--QGGTKTSRHVDAMLDCLRFGSAERPRLVHRLDKDTSGVLLVARTAAAAAKLTSAFRSKAIRKLYWAVVVGVPRPAEGVVDLSLSKLAGKRGERMVGGGGKKAVTFYRVVDRVGRKAAWLALEPRTGRTHQLRVH-ALALKTPILGDGKYGGRDAFLAAEGVSRRLHLHARAIRIPHPAAGH--------------LQVVAALPEHMAATWRCLGFDARDEDD 306 The following BLAST results are available for this feature:
BLAST of Gvermi12151.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12151.t1 ID=Gvermi12151.t1|Name=Gvermi12151.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=366bpback to top |