Gvermi12151.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12151.t1
Unique NameGvermi12151.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length366
Homology
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A2V3IMI2_9FLOR (Ribosomal large subunit pseudouridine synthase C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI2_9FLOR)

HSP 1 Score: 497 bits (1279), Expect = 5.200e-174
Identity = 242/350 (69.14%), Postives = 289/350 (82.57%), Query Frame = 0
Query:   16 LVGRAFSTKPKQPPPDTPNNRSFE-LPCATQPARFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTGRYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADDS 364
            L+ R FST  +      P++ S   LPCATQPARF+VS A    RLDRFIK SAPGLPPGLIHRHIRQSRV INGR+ER R+TPVRT+D+I+FPG VKLGL+RRKKRPPPDDVSL+EAM+V+ WLL+RDAR A LNKPPGLPV+A     T+RTLEQLLC LG+GRYWLVHRLQ ++GG +LVARDV AA LL+D+FR RMVTR++WGLVAGVP+HK+G+IDIDI G+KA+T+YRVVQMVD+HY+WLE EPRTGR NQLS HCAEGLGTP+VGD  +   ++ QHP+  GALQLCSRSITFPRLTQ ++S  ++    + DL+TV APLP HM+DTW+RLG+QERFA  S
Sbjct:   12 LLPRPFSTSARGA--SGPSSASSNGLPCATQPARFRVSLALDRVRLDRFIKHSAPGLPPGLIHRHIRQSRVLINGRVERSRATPVRTEDVITFPGHVKLGLTRRKKRPPPDDVSLSEAMLVRGWLLHRDARTAVLNKPPGLPVIAHSQENTSRTLEQLLCALGSGRYWLVHRLQTQVGGAVLVARDVGAATLLADYFRTRMVTRLYWGLVAGVPRHKKGIIDIDISGQKAITKYRVVQMVDSHYAWLEFEPRTGRSNQLSAHCAEGLGTPLVGDTIYPHQQDRQHPI-TGALQLCSRSITFPRLTQNSASRSRKGTRTASDLITVHAPLPLHMKDTWKRLGLQERFASYS 358          
BLAST of Gvermi12151.t1 vs. uniprot
Match: R7QAD7_CHOCR (S4 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD7_CHOCR)

HSP 1 Score: 322 bits (825), Expect = 1.420e-104
Identity = 171/335 (51.04%), Postives = 215/335 (64.18%), Query Frame = 0
Query:   48 RFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTGRYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGD--------RGFDGMRETQHPVDVGALQLC-------SRSITFPRLTQVNSSNRQRHR------GRSPDLVTVDAPLPPHMRDTWRRLGMQERFA 361
            +++V+    GSRLDRFIK  APG+PPGLI R IR+  + +      R + PVRT D+++FPG +KLGLSR K++P PDD+SLAE+ +VK W+L+RDAR   LNKP GLP         TR LE LL G+G GRYWLVHRL  E+GG I+VARDV AA LL++ FR R+V + +W LV G  + K G ID+ I GK+A T YRV+Q +D  + WLEL PRTGR +QL IHCA+GLGTPIVGD         G DG       VD G L L        SR I FP+LTQ  S   +R +      G     +T  APLPPHM+DTW+R G++E FA
Sbjct:   70 KWEVTAVDDGSRLDRFIKRRAPGVPPGLIQRLIRKRSIMVQSIPAIRNAHPVRTGDVVTFPGHIKLGLSRGKRKPQPDDISLAESAIVKHWVLHRDARCVVLNKPAGLPTQGGSS-VGTRHLEALLPGIGEGRYWLVHRLDKEVGGAIVVARDVGAAGLLAEHFRGRLVRKTYWALVEGSVKDKTGFIDLPIDGKRARTDYRVIQSLDKKFVWLELSPRTGRKHQLRIHCADGLGTPIVGDGKYGHGGPEGLDGQN-----VDGGLLSLMNPGLHLFSREIQFPKLTQHMSGGGKRSKRTAGSDGTGFPTITARAPLPPHMKDTWKRFGLEEHFA 398          
BLAST of Gvermi12151.t1 vs. uniprot
Match: UPI001C67F426 (RluA family pseudouridine synthase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C67F426)

HSP 1 Score: 164 bits (416), Expect = 4.060e-44
Identity = 116/340 (34.12%), Postives = 167/340 (49.12%), Query Frame = 0
Query:   41 PCATQPARFKVSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGK-------------------KAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDG---MRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
            P AT      V+P  + +RLDR+ +   P L  G + + +R  ++ ++G+      T +     I  P  +  G +    R PP  VS  EA ++++ +LYRDA V  LNKP GL V   P    TR L+ +L  L  G   R  LVHRL  +  GV+++AR  +AAA L+  FR R V +I+W +  G P    G ID+ +  +                   +AVT YRV+       +WLEL P TGR +QL +HCA+GLGTPI+GD  + G   M E   P+    L L +R++  P                   ++ V APLPPHM +T+  LG
Sbjct:   13 PAATAIQHRSVAPEEADTRLDRWFRRHFPRLTQGALQKMLRTGQIRVDGK-RAEAGTRLLAGQQIRIP-PLPEGPALEAPRRPPRPVSPEEARLLERMVLYRDASVIVLNKPHGLAVQGGPG--LTRHLDAMLDALRFGQEERPRLVHRLDRDTSGVLVLARSAAAAAKLAAAFRGRDVEKIYWAVAVGRPAPAAGRIDLPLARQSGPRGERTAPAEPGADKAARAVTDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCAQGLGTPILGDGKYGGAAAMIEGLPPL----LHLHARALRLPH--------------PEGGVLEVAAPLPPHMEETFAFLG 330          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A8J2ZBU1_9PROT (Pseudouridine synthase n=2 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZBU1_9PROT)

HSP 1 Score: 163 bits (413), Expect = 1.090e-43
Identity = 114/326 (34.97%), Postives = 162/326 (49.69%), Query Frame = 0
Query:   51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDI---------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMR---ETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
            V+P  +  RLDR+ +   P L  G + + +R  +V ++GR     ST +R    I  P  +  G     +R  P  VS  +A ++++ +LYRD  V ALNKP GL V   P    TR L+ +L  L  G   R  LVHRL  +  GV+L+AR  +AA+ L+  FR R   + +W +V G P  + G ID+ +               GG +A+T YRV+       +WLEL P TGR +QL +HCA GLGTPI+GD  + G     E   P+    L L +R++  P                   ++ V APLPPHM  T+  LG
Sbjct:   26 VAPEEADIRLDRWFRRHFPRLTQGALQKMLRTGQVRVDGR-RAEASTRLRPGQQIRIP-PLPEGPPTEAQRGAPRPVSPEDARLLERMVLYRDDSVIALNKPYGLAVQGGPG--LTRHLDAMLGALRFGHAERPRLVHRLDRDTSGVLLLARGAAAASKLAAAFRGRDAEKTYWAVVVGRPSPESGRIDLPLAKQPGPRGERTTPAEGGTRAITDYRVLDAAQRRAAWLELRPLTGRTHQLRVHCARGLGTPILGDGKYGGAAAQIEGLPPL----LHLHARALRLPH--------------PEGGMLEVAAPLPPHMEQTFAFLG 329          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A843RKL5_9PROT (Pseudouridine synthase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKL5_9PROT)

HSP 1 Score: 162 bits (409), Expect = 5.730e-43
Identity = 116/332 (34.94%), Postives = 161/332 (48.49%), Query Frame = 0
Query:   51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDI----------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-----LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQE 358
            V  A SG RLDR+ K   P L  G + + +R+  + ++GR   + S  +    ++  P   +   + R   P    VS  EA  ++  +LYRDA + AL+KP GL V         R L+ +L  L  G   R  LVHRL  +  GV+L+AR+   A  L+  FR +   +I+W LVAGVP  +RGVID+                D  GK A T ++VV+      SWL L P TGR +QL +HCA  +GTPIVGD  + G       +   A     L L +R +  P   +V ++ R            V APLPPHM  TW+ LG  E
Sbjct:   14 VEAAASGQRLDRWFKQHYPQLTHGRLEKMLRKGEIRVDGR-RVKASERLEEGQVVRVPPIPETAPAERPAAPAALAVSAKEAAALQAAVLYRDANIIALDKPAGLAVQGGSGQR--RHLDGMLEALRFGAEERPRLVHRLDRDTAGVLLLARNAPTARALTAAFRGKETQKIYWALVAGVPAERRGVIDLPLAKQAQSRGEAMAADDDAGKPARTFFQVVESYRRAASWLVLLPLTGRTHQLRVHCA-AMGTPIVGDGKYGGREAFPAALAKAAPAAKTLHLLARELALPD-PEVGTTLR------------VTAPLPPHMAATWKALGFNE 328          
BLAST of Gvermi12151.t1 vs. uniprot
Match: UPI0010801F87 (RluA family pseudouridine synthase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI0010801F87)

HSP 1 Score: 157 bits (398), Expect = 1.560e-41
Identity = 107/318 (33.65%), Postives = 158/318 (49.69%), Query Frame = 0
Query:   59 RLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG------------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLG 355
            RLDR+ +   P L  G + + +R  ++ ++GR     +T +     +  P   +     R  RPP   VS  +A  +++ +++RD  V AL+KP G+PV   P    TR+L+ LL  L  G   R  LVHRL  +  GV+L+AR  +AAA L+  FR R V + +W +V G P  + G IDI +                   G  A+T +R +       +WLEL+P TGR +QL +HCAEGLG PI+GD  + G       +  GAL L +R++  P                   ++ V APLPPHMR+T+   G
Sbjct:   16 RLDRWFRRHFPRLTQGALQKMLRTGQIRVDGR-RAEAATRLAPGQEVRIPPLPEGPAPERPARPP---VSEQDARALERLVIHRDDSVIALDKPHGMPVQGGPG--ITRSLDALLDALRFGHAERPRLVHRLDRDTSGVLLLARTPAAAAALARAFRGRDVEKTYWAVVVGEPTPREGRIDIALARLGGPHGERTQAVDDPKQGAHAITDFRTLDAARRRAAWLELKPLTGRTHQLRVHCAEGLGCPILGDGKYGGAAAHLEGLP-GALHLHARALRLPH--------------PEGGMLEVAAPLPPHMRETFAFFG 312          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A6N2DTI8_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6N2DTI8_9PROT)

HSP 1 Score: 157 bits (396), Expect = 2.470e-41
Identity = 113/343 (32.94%), Postives = 162/343 (47.23%), Query Frame = 0
Query:   51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPP-----PDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG--RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGD------RGFDGMRETQHPVDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADDS 364
            V+ A +G RLDR+ +   P +  GL+ + +R  +V ++G    +    +     +  P   K   +  K RPP     PD  ++A+   ++  +LY DA + ALNKP GL V  +    T   ++ LL GL  G  R  LVHRL  +  GV++VAR   AAA L+  FR+R   +++W +V GVP+   G ID+ +                 G +A+T YRVV       +WL LEP TGR +QL +HCA  +GTPI+GD        F G +  Q  V + A     R+IT PR                    T+ APLPP +  TW   G      D S
Sbjct:    6 VADADAGLRLDRWFRRHFPDVGHGLLEKWLRSGQVRVDGH-RAKAGARLTAGQRVRIPPHAKDHANNPKARPPAPAAPPDPRAIAD---LEARILYEDAAIIALNKPAGLAV--QGGSGTRHHVDALLPGLSRGGERPRLVHRLDKDTSGVLVVARTAQAAAALTRAFRSRATRKLYWAIVVGVPEPPAGRIDLPLAKRAGSGGERVAPDRDQGLRAITDYRVVARAGRRAAWLALEPVTGRTHQLRVHCA-AIGTPILGDGKYGGAASFPGQQWRQARVHLHA-----RAITLPRA--------------DGGTTTITAPLPPDLMRTWSFFGFTAEETDAS 322          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A564WGK8_9PROT (Pseudouridine synthase n=1 Tax=Candidatus Defluviicoccus seviourii TaxID=2565273 RepID=A0A564WGK8_9PROT)

HSP 1 Score: 157 bits (397), Expect = 2.640e-41
Identity = 111/327 (33.94%), Postives = 162/327 (49.54%), Query Frame = 0
Query:   51 VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTD--DLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG--RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIG----------------GKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGM 356
            V  A +G RLDR+ K   P +P GL+ + +R  +V ++G+   R S   R +   ++  P  V     R     PP   S A+A+ +K+ +LYRD  +  L+KP GL V  +      + L+ +L  L  G  R  LVHRL  +  GV+++AR  ++AA L   FR R V +++W LV GVP    G I   +                 G  AVT YRV++ +    +WLELEP TGR +QL +HC + LGTPI+GD  + G     +   +G  L L +R+I      +                + V APLP HMR+TW  LG+
Sbjct:   17 VGDAEAGLRLDRWFKRHYPQVPHGLLEKWLRTGQVRLDGK---RVSAGARVEAGQIVRVP-PVPAXXXRPTAANPPVPPSQADALALKRAVLYRDDDMIILDKPAGLAV--QGGTGLAQHLDGMLDVLAVGGERPRLVHRLDKDTSGVLVLARSAASAAALGQAFRGRAVRKLYWALVVGVPPEDVGEIRAPLAKDGSAGSERVGVDRVHGAMAVTHYRVLERIGRRAAWLELEPETGRTHQLRVHC-QVLGTPILGDGKYGGRAAFLNEAGIGRRLHLHARAIAVVLPAK--------------PAIVVAAPLPTHMRETWAFLGL 322          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A1Z9J471_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9J471_9PROT)

HSP 1 Score: 156 bits (395), Expect = 3.460e-41
Identity = 103/322 (31.99%), Postives = 162/322 (50.31%), Query Frame = 0
Query:   57 GSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDI---------------DIGGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA--LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQE 358
            G RLDR++K   PGL  G + + +R  ++ ++G   +  S  +    +   P  +    +       P   S A+ ++++  +L++D  V  ++KP GL V  +   +TTR L+ +L  L  G   R  LVHRL  +  GV+++AR   AA LL++ FR++   +++W +V GVP+   G I++               D  GK A++ YRV++      +WL LEP TGR +QL +HCA  LGTPI+GD  + G        D  A  L L +R+I  P                S  ++ V APLP HM+ TW+ LG +E
Sbjct:   15 GMRLDRWVKKRFPGLSQGRLEKLLRTGQIRLDGGRAKSNSRLISGQSVRMPP--LNADTANPSADRAPARASKADKLMLESAILHQDHHVLVIDKPAGLAV--QGGSKTTRHLDGMLDALTLGAAERPRLVHRLDKDTSGVLVLARTAKAARLLTEAFRSKDSRKVYWAIVTGVPRPAMGRINLGLDKRPGRGGEKVVADADGKPAISDYRVIEHAGRSAAWLSLEPVTGRTHQLRVHCA-ALGTPILGDGKYGGKAAFIEGSDKAARQLHLHARAIRIPN--------------PSGGMLVVSAPLPDHMKKTWKLLGFEE 317          
BLAST of Gvermi12151.t1 vs. uniprot
Match: A0A7V7KAL1_9PROT (Pseudouridine synthase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A7V7KAL1_9PROT)

HSP 1 Score: 155 bits (391), Expect = 8.810e-41
Identity = 114/326 (34.97%), Postives = 161/326 (49.39%), Query Frame = 0
Query:   59 RLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVRTDDLISFP---GEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALNKPPGLPVLAEPHHETTRTLEQLLCGLGTG---RYWLVHRLQAEIGGVILVARDVSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDI--------------GGKKAVTRYRVVQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHPVDVGA-LQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDTWRRLGMQERFADD 363
            RLDR+ K   P +  G + + +R  +V ++G    +  T +     +  P   GE +L        P P   S AE   +   +++RD  V A+NKPPGL V  +   +T+R ++ +L  L  G   R  LVHRL  +  GV+LVAR  +AAA L+  FR++ + +++W +V GVP+   GV+D+ +              GGKKAVT YRVV  V    +WL LEPRTGR +QL +H A  L TPI+GD  + G         V   L L +R+I  P     +              + V A LP HM  TWR LG   R  DD
Sbjct:    2 RLDRWFKRHFPQVTHGRLQKWLRTGQVRVDGG-RAKAGTRLEAGQRMRVPPMSGERELPAHAP---PSPTKASAAETDFLLNLVVHRDDHVIAINKPPGLAV--QGGTKTSRHVDAMLDCLRFGSAERPRLVHRLDKDTSGVLLVARTAAAAAKLTSAFRSKAIRKLYWAVVVGVPRPAEGVVDLSLSKLAGKRGERMVGGGGKKAVTFYRVVDRVGRKAAWLALEPRTGRTHQLRVH-ALALKTPILGDGKYGGRDAFLAAEGVSRRLHLHARAIRIPHPAAGH--------------LQVVAALPEHMAATWRCLGFDARDEDD 306          
The following BLAST results are available for this feature:
BLAST of Gvermi12151.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMI2_9FLOR5.200e-17469.14Ribosomal large subunit pseudouridine synthase C n... [more]
R7QAD7_CHOCR1.420e-10451.04S4 domain-containing protein n=1 Tax=Chondrus cris... [more]
UPI001C67F4264.060e-4434.12RluA family pseudouridine synthase n=1 Tax=Caldova... [more]
A0A8J2ZBU1_9PROT1.090e-4334.97Pseudouridine synthase n=2 Tax=Caldovatus sedimini... [more]
A0A843RKL5_9PROT5.730e-4334.94Pseudouridine synthase n=1 Tax=Kiloniellaceae bact... [more]
UPI0010801F871.560e-4133.65RluA family pseudouridine synthase n=1 Tax=Crenalk... [more]
A0A6N2DTI8_9PROT2.470e-4132.94Pseudouridine synthase n=1 Tax=Rhodospirillales ba... [more]
A0A564WGK8_9PROT2.640e-4133.94Pseudouridine synthase n=1 Tax=Candidatus Defluvii... [more]
A0A1Z9J471_9PROT3.460e-4131.99Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
A0A7V7KAL1_9PROT8.810e-4134.97Pseudouridine synthase n=2 Tax=Rhodospirillales Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 58..124
e-value: 2.7E-4
score: 30.3
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 59..121
e-value: 1.18884E-5
score: 40.6958
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 46..112
e-value: 6.4E-9
score: 37.2
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 146..278
e-value: 2.9E-16
score: 60.0
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 146..289
e-value: 5.45134E-36
score: 127.454
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 131..326
e-value: 4.9E-35
score: 123.1
NoneNo IPR availablePANTHERPTHR21600:SF34MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE RPUSD4coord: 62..360
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 62..360
NoneNo IPR availablePROSITEPS50889S4coord: 58..144
score: 11.316833
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 58..110
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 133..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3583416..3584513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12151.t1Gvermi12151.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3583416..3584513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12151.t1 ID=Gvermi12151.t1|Name=Gvermi12151.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=366bp
MTVITRFRSYKAVRFLVGRAFSTKPKQPPPDTPNNRSFELPCATQPARFK
VSPAYSGSRLDRFIKSSAPGLPPGLIHRHIRQSRVEINGRIERRRSTPVR
TDDLISFPGEVKLGLSRRKKRPPPDDVSLAEAMVVKQWLLYRDARVAALN
KPPGLPVLAEPHHETTRTLEQLLCGLGTGRYWLVHRLQAEIGGVILVARD
VSAAALLSDFFRARMVTRIFWGLVAGVPQHKRGVIDIDIGGKKAVTRYRV
VQMVDNHYSWLELEPRTGRINQLSIHCAEGLGTPIVGDRGFDGMRETQHP
VDVGALQLCSRSITFPRLTQVNSSNRQRHRGRSPDLVTVDAPLPPHMRDT
WRRLGMQERFADDSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf