Gvermi11537.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi11537.t1
Unique NameGvermi11537.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length398
Homology
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A2V3IJX5_9FLOR (Deoxycytidylate deaminase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJX5_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 8.670e-79
Identity = 166/403 (41.19%), Postives = 204/403 (50.62%), Query Frame = 0
Query:    1 MLICVCGPPRAGKHSVARYLVEALGARQLRAADLAPAQP-------ALAACWREDAVAVLVADPL--RCAALPRLLARPWVLIVFVDAPLLVRFARARPPTAHPAPPPALSDFVREEQRRANVQPAAHYELCAAAXXXXXXXXXAADAADAXXXXXXXXXXXXXXXXXXXXXXXDVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDLRLLERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCHGSTLYSTVFPCILCAKKIVQAGVARVVFDAHYAT-DDASEGLLRAGRVAVHPMRPDR 393
            ML+ +CGP RAGK ++  Y++  LG   +  +     Q         ++  W     AVL+ D L    + +  LL RPWVLIV VDAPLL R+ R        APP    D   E  R+   Q  +   L               D+                                                                    +D  L +R AHI I+NDF         L  L F+D RRLRP+WD YFMSLARLAAQR NCMKR+VGCVI R+ RVVATGYNGTP GV+NC QGGCPRCN    + VAL LCLCLHAEENAIIEAGR RC  +TLY+TVFPCILC+KKIVQAGV+RVVFD  Y++ ++ +  LL AG VA+   + D+
Sbjct:    1 MLVLICGPRRAGKKTLQSYMLSELGFHTIIPSLQTVHQQHTHALFDRISEYWLPHRNAVLLLDHLIHYNSFITTLLKRPWVLIVHVDAPLLTRYERH----CQSAPPIIGHDANLEHLRQFIAQDDSVTNLRVHNHCHLSSNNHVRDSQP---------------------------------------------------------HLRSQRDPTIDPLLFKRLAHIHIYNDFESVSHFHNNLQHLDFSDPRRLRPSWDTYFMSLARLAAQRTNCMKRKVGCVITRNHRVVATGYNGTPTGVKNCHQGGCPRCNNHHKQGVALDLCLCLHAEENAIIEAGRDRCQLATLYTTVFPCILCSKKIVQAGVSRVVFDTKYSSGEEPAHNLLEAGGVAIDCFQSDQ 342          
BLAST of Gvermi11537.t1 vs. uniprot
Match: R7QF28_CHOCR (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF28_CHOCR)

HSP 1 Score: 244 bits (622), Expect = 3.790e-73
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCN-RLSPRAVALHLCLCLHAEENAIIEAGRQRCHGSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAV 386
            LER + +RI NDF+   +LR  L T +FTD  RLRP+WD YFMSLA+LAA+R NCMKRRVGCVIAR++R+VATGYNGTP+GV NC  GGC RCN   S + V L LCLCLHAEENAIIEAGR+RC G  LY+ +FPCILCAKKIVQ+G+ R+VF+  YATD A+E LLR+G V +
Sbjct:  243 LERLSRLRIHNDFSTLAKLRTELRTFNFTDKERLRPSWDTYFMSLAKLAAERTNCMKRRVGCVIARNKRIVATGYNGTPSGVTNCLDGGCGRCNGAASSQGVGLDLCLCLHAEENAIIEAGRERCEGGILYTNLFPCILCAKKIVQSGIRRIVFETRYATDGAAEPLLRSGGVRI 417          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A5N7BR97_PETAA (Cytidine deaminase-like protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A5N7BR97_PETAA)

HSP 1 Score: 202 bits (513), Expect = 5.620e-58
Identity = 97/182 (53.30%), Postives = 121/182 (66.48%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDR 393
            L  RA +R+FN  +  ++L  ALATL+  D  RLRP WD YFM LA LAAQR+NCMKRRVGCV+ R+RRV++TGYNGTP  +RNC +GGCPRCNR     V L  CLCLHAEENA++EAGR+R   G+ LY    PC+ C  KI Q G++ VV+   Y  D  S  +L A  + +    P R
Sbjct:  156 LTDRAQVRLFNSSSSFEELHAALATLNLADEDRLRPNWDQYFMQLASLAAQRSNCMKRRVGCVLVRERRVISTGYNGTPRHLRNCNEGGCPRCNRGEGGGVGLSTCLCLHAEENALLEAGRERIREGAILYCDTCPCLTCTVKIAQVGISEVVYSQGYNMDQDSAAILEAAGIRLRRFSPPR 337          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A1V6T1X9_9EURO (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Penicillium steckii TaxID=303698 RepID=A0A1V6T1X9_9EURO)

HSP 1 Score: 201 bits (511), Expect = 8.460e-58
Identity = 95/180 (52.78%), Postives = 122/180 (67.78%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRP 391
            L  RA +R+FN  +  ++L ++L TL   D +RLRP WD YFM LA LAAQR+NCMKRRVGCV+ R+RRV++TGYNGTP  ++NC +GGCPRCNR     V L  CLCLHAEENA++EAGR+R   G+ LY    PC+ C  KI Q G++ VV+   Y  DDAS  +L +  V +    P
Sbjct:  152 LTDRAQVRLFNSSSSLEELHQSLQTLDLADEQRLRPNWDQYFMQLASLAAQRSNCMKRRVGCVLVRERRVISTGYNGTPRHLKNCNEGGCPRCNRGDGGGVGLSTCLCLHAEENALLEAGRERIREGAILYCDTCPCLTCTVKIAQVGISEVVYSQGYNMDDASATILESAGVRLRQFNP 331          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A3M2T2E9_9EURO (Deoxycytidylate deaminase n=1 Tax=Aspergillus sp. HF37 TaxID=1960876 RepID=A0A3M2T2E9_9EURO)

HSP 1 Score: 200 bits (509), Expect = 1.770e-57
Identity = 98/182 (53.85%), Postives = 121/182 (66.48%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDR 393
            L  RA +R+FN     +QL  ALATL+  D++RLRP WD YFM LA LAAQR+NCMKRRVGCVI R+RRV++TGYNGTP  ++NC +GGCPRCNR     V L  CLC+HAEENA++EAGR+R   GS LY    PC+ C  KI Q G++ VV+   Y  D  S  +L    V +    P R
Sbjct:  156 LTDRAQLRLFNASFSLEQLHSALATLNLADSQRLRPGWDQYFMQLASLAAQRSNCMKRRVGCVIVRERRVISTGYNGTPRHLKNCNEGGCPRCNRGEGGGVGLSTCLCIHAEENALLEAGRERIREGSVLYCDTCPCLTCTVKIAQVGISEVVYSQSYNMDRHSAAILEDAGVRLRQFSPPR 337          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A875RWJ6_EENNA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875RWJ6_EENNA)

HSP 1 Score: 198 bits (504), Expect = 5.450e-57
Identity = 97/191 (50.79%), Postives = 124/191 (64.92%), Query Frame = 0
Query:  209 DLRLLER--RAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCHGS-TLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDRAHV 396
            D RLL+   +AH+++ N+   ++ L + LA L F D  RLRP WD+YFMSLA LAA R+NCMKRRVGCVI R+ RV+ATGYNGTP   RNC +GGCPRCN      V L  CLCLHAEENA++EAGR R   S T+Y    PC+ C+ KIVQ G+  VV+   Y+ D  S  + R   V +    P ++ +
Sbjct:  128 DCRLLQNIEKAHLKLINNSRNQESLYKQLAALDFKDTERLRPAWDSYFMSLANLAALRSNCMKRRVGCVIVRENRVIATGYNGTPRKFRNCNEGGCPRCNHGDSSGVGLSTCLCLHAEENALLEAGRDRIGSSATVYCNTCPCLTCSIKIVQTGIHEVVYSQSYSMDTLSSKVFRQSGVIIRQFIPAKSGI 318          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A1DG45_NEOFI (Deoxycytidylate deaminase n=6 Tax=Aspergillus TaxID=5052 RepID=A1DG45_NEOFI)

HSP 1 Score: 199 bits (507), Expect = 5.850e-57
Identity = 96/182 (52.75%), Postives = 119/182 (65.38%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDR 393
            L  RA +R+FN  +  ++L  AL  L+  D +RLRP WD YFM LA LAAQR+NCMKRRVGCV+ R+RRV++TGYNGTP  + NC +GGCPRCNR     V L  CLCLHAEENA++EAGR+R   GS LY    PC+ C  KI Q G++ VV+   Y  D  S  +L A  V +    P R
Sbjct:  152 LTDRAQVRLFNSCSSLEELHAALEALNLADEQRLRPNWDLYFMQLASLAAQRSNCMKRRVGCVLVRERRVISTGYNGTPRHLTNCNEGGCPRCNRGEGGGVGLSTCLCLHAEENALLEAGRERIREGSILYCDTCPCLTCTVKIAQVGISEVVYSQGYNMDQESAAILEAAGVCLRQFSPPR 333          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A1R3R8D4_ASPC5 (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A1R3R8D4_ASPC5)

HSP 1 Score: 199 bits (506), Expect = 5.960e-57
Identity = 95/179 (53.07%), Postives = 119/179 (66.48%), Query Frame = 0
Query:  216 RAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDR 393
            RA +R+FN  +  ++L  AL +L   D +RLRP WD YFM LA LAAQR+NCMKRRVGCV+ RDRRV++TGYNGTP  + NC QGGCPRCNR     + L  CLCLHAEENA++EAGR+R   G+ LY    PC+ C  KI Q G++ VV+   Y  D+ S  +L A  V +    P R
Sbjct:  159 RAQVRLFNSSSSLKELHAALKSLRLADEQRLRPNWDQYFMELASLAAQRSNCMKRRVGCVLVRDRRVISTGYNGTPRHLENCNQGGCPRCNRGEGGGLGLSTCLCLHAEENALLEAGRERIREGAILYCDTCPCLTCTVKIAQVGISEVVYSQGYNMDNDSAAILNAAGVKLRQFSPPR 337          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A2I2GC95_9EURO (Deoxycytidylate deaminase n=1 Tax=Aspergillus steynii IBT 23096 TaxID=1392250 RepID=A0A2I2GC95_9EURO)

HSP 1 Score: 198 bits (504), Expect = 9.750e-57
Identity = 94/180 (52.22%), Postives = 119/180 (66.11%), Query Frame = 0
Query:  213 LERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRP 391
            L  RA +R+FN  +  ++L  AL  L+  D +RLRP+WD YFM LA LAAQR+NCMKRRVGCV+ RD RV++TGYNGTP  + NC +GGCPRCNR     V L  CLCLHAEENA++EAGR+R   G+ LY    PC+ C  KI Q G++ VV+   Y  D  S  +LRA  + +    P
Sbjct:  155 LTDRAQVRLFNSSSSLEELHAALKALNLADDQRLRPSWDQYFMQLASLAAQRSNCMKRRVGCVLVRDHRVISTGYNGTPRHITNCNEGGCPRCNRGEGGGVGLSTCLCLHAEENALLEAGRERIREGAVLYCDTCPCLTCTVKITQVGISEVVYSQGYNMDQDSAAILRAAGIRLRQFSP 334          
BLAST of Gvermi11537.t1 vs. uniprot
Match: A0A0U4Z3X2_ASPCI (Putative Deoxycytidylate deaminase n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U4Z3X2_ASPCI)

HSP 1 Score: 198 bits (503), Expect = 1.330e-56
Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 0
Query:  212 LLERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTWDAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQGGCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCH-GSTLYSTVFPCILCAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDR 393
            +L  RA +R+FN  +   +L  AL  L+  D +RLRP WD YFM LA LAAQR+NCMKRRVGCV+ R+RRV++TGYNGTP  ++NC +GGCPRCNR     V L  CLCLHAEENA++EAGR+R   GS LY    PC+ C  KI Q G++ VV+   Y  D  S  +L A  + +    P R
Sbjct:  148 VLTDRAQLRLFNSSSSLDELHAALKALNLADEQRLRPNWDQYFMELASLAAQRSNCMKRRVGCVLVRERRVISTGYNGTPRHLQNCNEGGCPRCNRGEGGGVGLSTCLCLHAEENALLEAGRERIREGSILYCDTCPCLTCTVKIAQVGISEVVYSQGYNMDKDSAAILEAAGIRLRQFSPPR 330          
The following BLAST results are available for this feature:
BLAST of Gvermi11537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJX5_9FLOR8.670e-7941.19Deoxycytidylate deaminase n=1 Tax=Gracilariopsis c... [more]
R7QF28_CHOCR3.790e-7366.29CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A5N7BR97_PETAA5.620e-5853.30Cytidine deaminase-like protein n=2 Tax=Aspergillu... [more]
A0A1V6T1X9_9EURO8.460e-5852.78CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A3M2T2E9_9EURO1.770e-5753.85Deoxycytidylate deaminase n=1 Tax=Aspergillus sp. ... [more]
A0A875RWJ6_EENNA5.450e-5750.79CMP/dCMP-type deaminase domain-containing protein ... [more]
A1DG45_NEOFI5.850e-5752.75Deoxycytidylate deaminase n=6 Tax=Aspergillus TaxI... [more]
A0A1R3R8D4_ASPC55.960e-5753.07CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A2I2GC95_9EURO9.750e-5752.22Deoxycytidylate deaminase n=1 Tax=Aspergillus stey... [more]
A0A0U4Z3X2_ASPCI1.330e-5651.91Putative Deoxycytidylate deaminase n=1 Tax=Aspergi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 241..397
e-value: 3.6E-47
score: 162.0
NoneNo IPR availablePANTHERPTHR11086:SF18DEOXYCYTIDYLATE DEAMINASEcoord: 177..394
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 249..365
e-value: 1.3E-26
score: 92.4
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 249..381
score: 24.480988
IPR015517Deoxycytidylate deaminase-relatedPANTHERPTHR11086DEOXYCYTIDYLATE DEAMINASE-RELATEDcoord: 177..394
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 322..355
IPR035105Deoxycytidylate deaminase domainCDDcd01286deoxycytidylate_deaminasecoord: 251..376
e-value: 2.60201E-52
score: 168.992
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 251..387
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:762309..763502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi11537.t1Gvermi11537.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 762309..763502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi11537.t1 ID=Gvermi11537.t1|Name=Gvermi11537.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=398bp
MLICVCGPPRAGKHSVARYLVEALGARQLRAADLAPAQPALAACWREDAV
AVLVADPLRCAALPRLLARPWVLIVFVDAPLLVRFARARPPTAHPAPPPA
LSDFVREEQRRANVQPAAHYELCAAAAAADADADAAADAADADAADADAA
DADAADADAADADAADVDADAADADAANADADAADAANADATAGAADASA
AETAPAAVDLRLLERRAHIRIFNDFAGEQQLRRALATLHFTDARRLRPTW
DAYFMSLARLAAQRANCMKRRVGCVIARDRRVVATGYNGTPAGVRNCFQG
GCPRCNRLSPRAVALHLCLCLHAEENAIIEAGRQRCHGSTLYSTVFPCIL
CAKKIVQAGVARVVFDAHYATDDASEGLLRAGRVAVHPMRPDRAHVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR015517dCMP_deaminase-rel
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR035105Deoxycytidylate_deaminase_dom
IPR016193Cytidine_deaminase-like
IPR027417P-loop_NTPase