Ggra3342.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3342.t1
Unique NameGgra3342.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length75
Homology
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BLAST of Ggra3342.t1 vs. uniprot
Match: A0A1X6P964 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P964_PORUM)

HSP 1 Score: 59.3 bits (142), Expect = 1.160e-9
Identity = 27/46 (58.70%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:    1 MGALLTGTVIFLVLGFISYFIVSAIYRNDKDAQALGQLSVVLATVC 46
            MGAL+ GT++F ++  ++YF VS ++RNDKD+QAL QLSV+LA VC
Sbjct:   41 MGALIVGTMLFALMAVLAYFCVSVVWRNDKDSQALAQLSVILAAVC 86
The following BLAST results are available for this feature:
BLAST of Ggra3342.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6P9641.160e-958.70Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..74
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:64508..64917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3342.t1Ggra3342.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 64508..64917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3342.t1 ID=Ggra3342.t1|Name=Ggra3342.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=75bp
MGALLTGTVIFLVLGFISYFIVSAIYRNDKDAQALGQLSVVLATVCISCL
NIFVVTHSISFDLFCTTVSESDAQ*
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