Ggra9079.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9079.t1
Unique NameGgra9079.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length278
Homology
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IUR8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 335 bits (858), Expect = 3.830e-113
Identity = 147/230 (63.91%), Postives = 172/230 (74.78%), Query Frame = 0
Query:   48 GPCDLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 277
            GPC LK A+GGYSNF S   PA  Y+RGQ+F +KYHRNNHGPGGFIR+SLV  +D M K +H RNAFHYSCWGA+ ++A PNELSTD+FGF  VGNDGE HSAP+AYY +F T+P  VPDG Y+LGWVW+GGT   PI+DN+   P   G+F DYWACSYV +KGG  L+ S DPVFVNDM  FS++GCMA ND PG CS EPC    FYRKP+PF  G KP  +T   F
Sbjct:   19 GPCQLKAAKGGYSNFGSTINPAREYQRGQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3J1Z2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 316 bits (810), Expect = 3.750e-104
Identity = 137/257 (53.31%), Postives = 182/257 (70.82%), Query Frame = 0
Query:   22 HSTISGPQPISPGYCRLEDDPKL---SCAGPCDLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDN--KKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPIT 273
            HS ++ PQ +SP  CR+  + K    +C GPCDL+  +GGY+N  SPD P+AVY RGQR  +KY RNNHGPGGFIR+++V    +MDKA+HERNAFHYSCWGA  ++A P+EL TD FG++ VGNDGE+H   + YY+A ++IP V+PDG YVLGWVW+GG GS P+  N  +  +P P GY+ D W+C+YV ++GGL L  +Y P F ND+  ++ EGC+AAND PG C+ EPC     ++KPR F  G  P P+T
Sbjct:    5 HSIMTEPQSVSPRDCRVGGEAKSGIDNCHGPCDLRAIQGGYANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLT 261          
BLAST of Ggra9079.t1 vs. uniprot
Match: R7QEV6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 306 bits (783), Expect = 1.220e-99
Identity = 134/226 (59.29%), Postives = 166/226 (73.45%), Query Frame = 0
Query:   52 LKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 277
            ++  EGGYSNF+SPD PAAVY+RGQ   +KY RNNHGPGGFIR++LV PE +MDK  H +NAF+Y+CWGA  + A  NE+  D+FGF+ VG+DGE+HS PK YY+  + IPSVVPDGKYVLGWVWYGG G +  + N + EP P+GYFGDYW+CSYV + GG  L   + PVF NDM G+S  GCM+AND PG CS EPC V + Y+ PRPF  G  P  +T + F
Sbjct:    1 MRAIEGGYSNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGS-AEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQF 225          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IS62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 7.170e-96
Identity = 143/283 (50.53%), Postives = 185/283 (65.37%), Query Frame = 0
Query:    1 MSSMQYTLVA-TALIFAHTVLCHSTISGPQPISPGYCRLEDDPKL---SCAGPCDLKG--AEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 277
            M S  + LV  TAL+ AH     S ++ PQ  SP  CRL  + +    +C GPCDL+   A+  Y+NF +P  PAA Y RGQR  IKY RNNH PGGFIR++ V+P  IMD+  H RNAFHYSCWGA+   A+PNEL  D FGFT+ G+DG +H   K YY+  ITIP+V+PDG YVLGW WYGGTG N         P  + YFGDY++CS+V V+GG + +++Y P F+NDM  FS+ GCM++ D  G C++EPC   AF+R+PR F  G+ P P+T   F
Sbjct:    8 MISFVFLLVCQTALVSAH-----SQMTQPQSTSPKTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGG-EYTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALF 284          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IFC9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 7.650e-80
Identity = 106/174 (60.92%), Postives = 133/174 (76.44%), Query Frame = 0
Query:  104 MDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 277
            M+KA+H+ NAFHYSCWGA   +A  +EL  D++GFT VG+DGE+H APK YY   +TIP+ +PDG YV+GWVW+GGTG   I+ N+  EP+PWGYFGDYWACS+V V+GG  LS SY PVF NDM  +S EGCM+AN+ PGTC+ EPC V   Y+KPRPFT+G+ P P+T  NF
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 174          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IBQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ8_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 3.990e-45
Identity = 78/175 (44.57%), Postives = 106/175 (60.57%), Query Frame = 0
Query:  104 MDKAIHERNAFHYSCWGAYTREAKPNELSTDKFG-FTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRKPRPFTKGKKPRPITSKNF 277
            M+KA+H+ NAFH    G    + K + +S+ +    ++    GE+H APK YY   +TIP+ +PDG YV+GWVW+GGTG   I+ N+  EP+PW              K G    + Y PVF NDM  +S EGCM+AN+ PGTC+ EPC V   Y+KPRPFT+G+ P P+T  NF
Sbjct:    1 MEKAVHQHNAFHLQLLGRQF-QFKRHPMSSKRIDTVSLCWQHGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWVILATIGHVRSFASKVGSTF-RLYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNF 173          
BLAST of Ggra9079.t1 vs. uniprot
Match: R7QJR3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 163 bits (413), Expect = 2.390e-44
Identity = 89/249 (35.74%), Postives = 126/249 (50.60%), Query Frame = 0
Query:    5 QYTLVATALIFAHTVLCHSTISGPQPISPGYCRLEDDPKLSCAGPCDLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPG--GFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPC 251
             Y  +A+  I    V  HS +  P P     CR  +     C GPC      G  +   SP +PAA +RRG++  + +HRNNHG G  GF+R++LV  + +MD   H++  F  SCW +   + K            + GND E  +     Y A IT+P+  PDG YVLGW WYGG       D K        +FGDY++CS+V ++GG +LS S  PVF   +     +GC+++ D  G C +EPC
Sbjct:    4 NYIFLASLFILTAFVEGHSHLGQPLPTRRLDCRAGNGRPRDCYGPCPALDTYGDPTGI-SPSRPAATWRRGEQKTVSWHRNNHGKGESGFVRLTLVPVDKMMDSRAHKKFTFQISCWSSGLHKCKSRNKH-------VCGNDKEGMA-----YRAPITVPTAYPDGIYVLGWAWYGGG------DFKHDS-----FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPC 228          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IGZ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGZ3_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 1.340e-41
Identity = 98/285 (34.39%), Postives = 144/285 (50.53%), Query Frame = 0
Query:    4 MQYTLVATALIFAHTVLCHSTISGPQPISPGYCRLEDDPKLSCAGPC---DLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGP--GGFIRVSLVKPEDIMDKAIHERNAFHYSCWGA-----YTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFY-RKPRPFTKGKKPRPITSKNF 277
            M+ + +   L+FA  V  HS ++ P P     CR+ +    +C GPC   D  G   G S    P +PA V+RRG+R  I +HRNNHG    GF+R +LV    +MDK  H +  F  SCW +     Y+R  +            + GND E      AY +  +T+PSV PDG YV GW WYGG            + +  G+FGDY++CS++ ++GG +L+ SY P F+   +  S   C+++ D  G C +EPC       R+PR   +    R I+ ++F
Sbjct:    1 MKVSFILLTLLFA-LVQSHSHLARPLPTRRLDCRVGNGRPRACYGPCPPLDTYGEPTGIS----PQRPAEVWRRGERQIISWHRNNHGKRESGFVRFTLVPVSKMMDKNAHRKFTFQISCWSSGLHRCYSRSER------------VCGNDAEG----LAYEVP-MTVPSVYPDGVYVFGWAWYGGG-----------DFRGRGFFGDYYSCSFIRIEGGSRLTTSYSPRFIAGTRQSSQSTCISSVDRIGVCIREPCRGPQIAPRRPRGLPRTIYLRDISRESF 252          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A2V3IRK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRK5_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 3.080e-39
Identity = 85/259 (32.82%), Postives = 122/259 (47.10%), Query Frame = 0
Query:   19 VLCHSTISGPQPISPGYCRLEDDPKLSCAGPCDLKGAEGGYSNFNSP----DKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYR-KPRPFTKGKKPRPI 272
            V  HS ++ P P    +CR+       C GPC L      Y   N P      PA  +RRG +  +++HR+NH   GF+R+ LV  + +MDK  HE+ AFH+ C              T        GND E  +  K      + +P+  PDG YV GW WYGG       D + +      +FGDY++CS+V +KGG+ ++ +Y+P +           C+++ D  G C KEPC V   Y  +P  F  G KP  I
Sbjct:   25 VQAHSNLADPLPTRELHCRVGAQQGRDCYGPCPLPD---DYGRLNHPWINEHNPAETWRRGDKVKVRWHRDNHDGTGFVRLVLVPVDKMMDKKAHEKYAFHFLCMNEGLHRCPDRSYDT-------CGNDAEGMAWQKE-----VEVPTSYPDGVYVFGWSWYGGG------DYRAMS-----FFGDYYSCSFVEIKGGVAVTDAYEPTW-------DGHKCVSSTDRLGVCWKEPCHVGRMYEMEPAEFKNGIKPEAI 250          
BLAST of Ggra9079.t1 vs. uniprot
Match: A0A1X6P3E1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E1_PORUM)

HSP 1 Score: 149 bits (375), Expect = 1.100e-37
Identity = 100/286 (34.97%), Postives = 138/286 (48.25%), Query Frame = 0
Query:    7 TLVATALIFAHTVL----------CHSTISGPQPISP-GYCRLED--DPKLSCAGPCDLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKPEDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSAPKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFGDYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEPCEVTAFYRK--PRPFTKGKKPRPITSKNF 277
            TL+ATA + A               HS +S P PIS    CR+         C GPC         S+ N    PAA+YRRG ++ +++ RNNH  GG +R ++V   ++ D   HERNAFH+SCW     +    + + D +  T   N   K           + IP+ +PDG YVLGW WYGG G  P+   K+        FGDY+ CSYV V+GG  L+  + P F  D  G     C++  + PG C +EPC    + R+  P  F  G+ P PI + NF
Sbjct:   13 TLMATAALLATVTALATTAPAPAAAHSFLSMPLPISRLDGCRIGGVGGTPGHCPGPCPNSDFRPDTSSKN----PAAIYRRGSQYEVRWTRNNH-EGGIVRWAMVPVSEMWDMGSHERNAFHWSCWNINRFKCGAMDHNRDCYFDT--SNMAFKDQ---------LRIPNNLPDGDYVLGWTWYGG-GEGPV--GKQA------IFGDYYDCSYVRVEGGNPLADKHIPTFSGDATGT----CLSTVNRPGICKREPCAPMPYVRRRVPVEFEGGRHPPPIYASNF 269          
The following BLAST results are available for this feature:
BLAST of Ggra9079.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IUR83.830e-11363.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z23.750e-10453.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV61.220e-9959.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IS627.170e-9650.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFC97.650e-8060.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBQ83.990e-4544.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR32.390e-4435.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IGZ31.340e-4134.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRK53.080e-3932.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P3E11.100e-3734.97Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:136794..137706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9079.t1Ggra9079.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 136794..137706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9079.t1 ID=Ggra9079.t1|Name=Ggra9079.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=278bp
MSSMQYTLVATALIFAHTVLCHSTISGPQPISPGYCRLEDDPKLSCAGPC
DLKGAEGGYSNFNSPDKPAAVYRRGQRFPIKYHRNNHGPGGFIRVSLVKP
EDIMDKAIHERNAFHYSCWGAYTREAKPNELSTDKFGFTIVGNDGEKHSA
PKAYYIAFITIPSVVPDGKYVLGWVWYGGTGSNPIQDNKKVEPQPWGYFG
DYWACSYVHVKGGLQLSKSYDPVFVNDMKGFSSEGCMAANDEPGTCSKEP
CEVTAFYRKPRPFTKGKKPRPITSKNF*
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