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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5339.t1.start1 | Ggra5339.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000172_pilon 188020..188022 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5339.t1.stop1 | Ggra5339.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000172_pilon 192422..192424 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=677bp MASIFFETNDVTECMIMDYRRNQRAHYFQERDVGRSRLKSLRNPLLRRSD FSLPFEVRTLTPVSVINGYAAGDKVVDLSVDDRKKIVQNNHSAGIDVPLA ESARNTYGVYEGSATGAEQKEIGRNGSNADDSLHSSGALIETPIPHDAVQ RPTSLKEVKKSREYIRSEVRRRVQYENAHLPPVCRRISRPKVRFLDSEKR AERKAIVKQVLQDVLQDVLSCSLHGILPPEEEKDSRQLPTLVSRDGQPLP IQPRPVASRPILRPVSVVVRTPAPSIMNDVVGPYGNGALGDDADRTSEAF GTDVGGVCCGENDVTEEIDVNDSSKNCFVQSGIPLITEETKTGQSQTIFG GDPVLEFNREERDTLVTALSHGEVGDIPTMTQYVQQRASEDGSELIEQFL FLDENEEVPNELIVIPKVEDEPDKNITPSSEGTDTGSTNEDDGEGDTQEL DVHDVFKAAVISYFRSLDVHAPEARVLDMISLRNVMVSNGDEKSEVVAQD IDSFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNI AMESYKQGSLPSLSVFKTFKVGENPNAQKELVRWENSSVPFIQAPNKANV KIVKRRKSYTERFRAKKAKVIGCGEERYECSQDEHSQDRYGSQAQIQSSR GRSEHTRAAVDNALSLALSIVENRDN* back to topspliced messenger RNA >Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000172_pilon:188020..192424+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCTTCGATTTTCTTTGAAACTAACGATGTAACCGAGTGTATGATTAT GGACTATCGCCGGAATCAACGCGCTCATTATTTCCAGGAACGTGATGTTG GGCGTTCAAGGCTGAAAAGCTTGCGGAATCCCCTGCTACGACGCTCCGAC TTCAGTTTACCCTTCGAGGTAAGGACACTGACCCCAGTATCCGTTATAAA TGGATATGCAGCAGGCGACAAAGTGGTTGATCTATCAGTAGATGATAGAA AGAAGATAGTTCAGAACAATCACAGTGCTGGTATCGATGTTCCTCTGGCG GAGAGTGCCAGAAATACATATGGAGTTTATGAAGGCAGTGCTACAGGGGC GGAACAGAAAGAAATTGGACGTAATGGGAGTAACGCAGATGATTCTCTCC ATAGCTCGGGCGCTCTAATCGAGACGCCTATCCCTCACGACGCAGTGCAG CGACCTACCTCTCTGAAAGAGGTAAAGAAGAGTCGAGAATACATTCGCTC TGAAGTACGCAGGAGAGTACAGTATGAGAATGCTCATTTACCGCCTGTTT GCCGCAGAATCTCAAGGCCCAAAGTCAGGTTTCTGGATTCGGAAAAGCGA GCTGAGCGAAAGGCAATTGTAAAGCAGGTGCTTCAAGACGTTCTACAAGA CGTTTTATCGTGCTCCCTACACGGAATACTACCTCCTGAGGAAGAGAAGG ACAGTCGTCAGCTTCCTACCCTTGTATCTCGAGATGGACAGCCGCTTCCA ATTCAACCGAGGCCAGTGGCGTCGCGACCAATTCTGCGTCCTGTATCGGT GGTCGTACGTACTCCAGCACCTTCGATCATGAACGACGTTGTTGGCCCAT ATGGAAATGGAGCTCTGGGTGATGATGCCGACCGTACCTCGGAGGCCTTT GGAACTGACGTCGGTGGAGTATGTTGTGGAGAGAATGACGTCACGGAGGA AATTGACGTCAACGATTCAAGTAAAAATTGTTTCGTTCAGAGTGGCATAC CGTTAATCACCGAAGAGACTAAGACAGGCCAGTCGCAGACGATATTTGGA GGGGACCCCGTCCTGGAGTTTAACCGTGAGGAACGAGACACTCTGGTAAC GGCCCTGTCGCATGGTGAAGTGGGAGACATACCAACCATGACGCAGTACG TACAGCAACGAGCCAGTGAAGACGGGTCCGAACTCATTGAACAGTTCTTG TTCTTAGATGAAAACGAAGAAGTGCCCAATGAACTCATCGTCATACCAAA GGTGGAAGATGAACCAGATAAAAACATCACGCCGAGCTCTGAAGGAACAG ATACTGGTAGCACCAATGAAGATGATGGCGAAGGAGATACACAGGAGCTC GACGTTCATGATGTTTTTAAAGCGGCTGTTATATCTTATTTCAGAAGCTT GGATGTCCATGCTCCCGAGGCGCGTGTCCTGGACATGATCAGTCTACGGA ATGTAATGGTATCGAACGGTGATGAGAAGTCCGAGGTAGTTGCCCAGGAT ATTGATTCTTTTTTGAAGACGGTGGCGGAGGAGGAGGTCGGCACTTGCGT AAAATGGTCTGATGCCCAGGCAATGTTTGACCAAATTAGGCGCGTAACAT CGGGTATGGGTCCGTATGCGGTTAACCACTTTCAGCAGGTATTGAACATA GCAATGGAGAGCTACAAGCAGGGAAGTTTACCGTCTCTTTCTGTGTTCAA GACATTCAAAGTGGGCGAAAATCCCAATGCACAGAAAGAATTAGTGCGGT GGGAGAACAGTTCAGTACCCTTTATCCAAGCTCCGAACAAAGCCAACGTT AAGATTGTGAAACGAAGGAAGAGCTACACGGAACGCTTTAGAGCGAAAAA GGCGAAGGTAATTGGATGTGGTGAGGAGCGCTACGAATGCTCCCAGGACG AGCATTCACAAGACAGGTATGGATCGCAAGCCCAAATACAATCTTCGCGG GGTCGAAGCGAACATACCCGAGCCGCTGTAGATAATGCATTAAGTTTAGC GCTCAGTATCGTGGAGAATAGAGACAATTAG back to topprotein sequence of Ggra5339.t1 >Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MASIFFETNDVTECMIMDYRRNQRAHYFQERDVGRSRLKSLRNPLLRRSD FSLPFEVRTLTPVSVINGYAAGDKVVDLSVDDRKKIVQNNHSAGIDVPLA ESARNTYGVYEGSATGAEQKEIGRNGSNADDSLHSSGALIETPIPHDAVQ RPTSLKEVKKSREYIRSEVRRRVQYENAHLPPVCRRISRPKVRFLDSEKR AERKAIVKQVLQDVLQDVLSCSLHGILPPEEEKDSRQLPTLVSRDGQPLP IQPRPVASRPILRPVSVVVRTPAPSIMNDVVGPYGNGALGDDADRTSEAF GTDVGGVCCGENDVTEEIDVNDSSKNCFVQSGIPLITEETKTGQSQTIFG GDPVLEFNREERDTLVTALSHGEVGDIPTMTQYVQQRASEDGSELIEQFL FLDENEEVPNELIVIPKVEDEPDKNITPSSEGTDTGSTNEDDGEGDTQEL DVHDVFKAAVISYFRSLDVHAPEARVLDMISLRNVMVSNGDEKSEVVAQD IDSFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNI AMESYKQGSLPSLSVFKTFKVGENPNAQKELVRWENSSVPFIQAPNKANV KIVKRRKSYTERFRAKKAKVIGCGEERYECSQDEHSQDRYGSQAQIQSSR GRSEHTRAAVDNALSLALSIVENRDN* back to topmRNA from alignment at tig00000172_pilon:188020..192424+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4405bp|location=Sequence derived from alignment at tig00000172_pilon:188020..192424+ (Gracilaria gracilis GNS1m male) ATGGCTTCGATTTTCTTTGAAACTAACGATGTAACCGAGTGTATGATTAT
GGACTATCGCCGGAATCAACGCGCTCATTATTTCCAGGAACGTGATGTTG
GGCGTTCAAGGCTGAAAAGCTTGCGGAATCCCCTGCTACGACGCTCCGAC
TTCAGTTTACCCTTCGAGGTAAGGACACTGACCCCAGTATCCGTTATAAA
TGGATATGCAGCAGGCGACAAAGTGGTTGATCTATCAGTAGATGATAGAA
AGAAGATAGTTCAGAACAATCACAGTGCTGGTATCGATGTTCCTCTGGCG
GAGAGTGCCAGAAATACATATGGAGTTTATGAAGGCAGTGCTACAGGGGC
GGAACAGAAAGAAATTGGACGTAATGGGAGTAACGCAGATGATTCTCTCC
ATAGCTCGGGCGCTCTAATCGAGACGCCTATCCCTCACGACGCAGTGCAG
CGACCTACCTCTCTGAAAGAGGTAAAGAAGAGTCGAGAATACATTCGCTC
TGAAGTACGCAGGAGAGTACAGTATGAGAATGCTCATTTACCGCCTGTTT
GCCGCAGAATCTCAAGGCCCAAAGTCAGGTTTCTGGATTCGGAAAAGCGA
GCTGAGCGAAAGGCAATTGTAAAGCAGGTGCTTCAAGACGTTCTACAAGA
CGTTTTATCGTGCTCCCTACACGGAATACTACCTCCTGAGGAAGAGAAGG
ACAGTCGTCAGTACGCAGGGGAGGCGAAGGACATACTGGATTTCATTTCG
AGTATAAGCAGGCGTACAGGATTCTTTTTTACGTTGCATTACTTCAGATA
TGTGCGGAGACCTCCTAAGAAGAATTTACGTCTTCTAACCGCCCGCTTTC
GGTGTGTGCAGCACAAAGAAAAGTGCCCAGCGGGTATCGTTGTCGGATTG
CCGCGGATCAGCTCTCGAAACTGGCTGGTGCAGGTAAACTTCAACCACTC
GCATAAAGCAAGTGGGGCTCCCGAAGCATTCATTCAAGATCATTATGGCG
CAGTTGAAGCAAGAATGATAAAGCAATTCCACGCATTTCGGGGAAGGGTT
ACGGGAAAGAAGCAAGGCTTCTGGGATGTACTCTACAGCAAAAGCTTCCC
TCGCCATACAATGGGCTCTCATTTGGACGGAAACCCCAATAGAACTATCT
TCAATGACGGCGTTGTGGTTGAGGAAGGCTTCCTACCCTTGTATCTCGAG
ATGGACAGCCGCTTCCAATTCAACCGAGGCCAGTGGCGTCGCGACCAATT
CTGCGTCCTGTATCGGTGGTCGTACGTACTCCAGCACCTTCGATCATGAA
CGACGTTGTTGGCCCATATGGAAATGGAGCTCTGGGTGATGATGCCGACC
GTACCTCGGAGGCCTTTGGAACTGACGTCGGTGGAGTATGTTGTGGAGAG
AATGACGTCACGGAGGAAATTGACGTCAACGATTCAAGTAAAAATTGTTT
CGTTCAGAGTGGCATACCGTTAATCACCGAAGAGACTAAGACAGGCCAGT
CGCAGACGATATTTGGAGGGGACCCCGTCCTGGAGTTTAACCGTGAGGAA
CGAGACACTCTGGTAACGGCCCTGTCGCATGGTGAAGTGGGAGACATACC
AACCATGACGCAGTACGTACAGCAACGAGCCAGTGAAGACGGGTCCGAAC
TCATTGAACAGTTCTTGTTCTTAGATGAAAACGAAGAAGTGCCCAATGAA
CTCATCGTCATACCAAAGGTGGAAGATGAACCAGATAAAAACATCACGCC
GAGCTCTGAAGGAACAGATACTGGTAGCACCAATGAAGATGATGGCGAAG
GAGATACACAGGAGCTCGACGTTCATGATGTTTTTAAAGCGGCTGTTATA
TCTTATTTCAGAAGCTTGGATGTCCATGCTCCCGGTCTGGACGTCGTAAA
GGAGGTTCGATATATCTCAGAATGCCTTGGGTACAGTCTAAAATGTAGAA
CGTCGATGTTTGTAGGAGAGAAGTGTGGAGGGGTGGATCCGGAGCATGGG
CGTGTCGAAGACACTCGTGTGCTGAagaaatgcatactgaaatgtcggaa
acgtaacaggaagcagctatgtaacttctctttgacaattaagactttgg
tgcccgaagatgaggatgacggtagatgctacgtgggagacttcagggaa
gctacacacaatcaccccccttccaaagaaaatggggggatcagacactt
aactccgaagatgcgttcggaagccttcgatatgacgaataggctacata
taagcctcgtggacactgtgaggtttctgtcgaataagtacggggtgccg
attaatgtgcgttctgtacggcagttggtaggttacaatcgggaagttag
ttatccaaaggacctggagtgcacgaagttgctgcaaaacttagtcggtt
tgcatgaggaagacgtacaaaacaagttcgcattcagttgtgacagagaa
ggcagaatatcgtccgtttgctgggcgtttaaagagtggattgaagacta
taaaaggtttggggtggtacccggcgtctcagtcgattgcaaggctatcg
ctaatcgttatggtttccctgtctttacagttaatggaagaggaaacgat
gggttcactttaacattcttcatggcgtttatgaacggagaaacggagga
agacttcacagagattctgaacaggtttaagtccatgataccaatctctc
catccctaataaccatggatcaaagcttcgcttgcatcgctgcagcggag
aaggtgtttgagacgtcattcatctccttagatgaatggcatctcaatca
gaaccagatgaaaaatgttgcatcgtggtgcgcgaagattggacggtccc
agtggtgcgacgctatgagtagggatctgttcaacctaaggcgatctcgc
tccctctcttcattcacgacccgacgagcagagttcgagaatgagtactt
ttctggatatacagagaaactacctgtatggtttacttatctctacgtgc
atagaccccagctggtggtcgcatgctttcgaaatgctgctatcccgcgt
tcgtatctcttccaaggaaccgggtacactgaggcgtctaatgccgggta
cagggcatacatattggcgaagaaggtgccgttcagtgcaatacctcgcc
aactaaagtggctcacctcacgaagagcgtcagagcgaaatgagtctcgt
cttcgctctatgaccgcggtgagctcccgttttagatccattcgtgattg
tcagctccctctccctacccaagtggttgatgagcttatttcggagtata
caagctacagcctaacgaagtttaaggaaataagcgtcgtaccatcacgt
aattatgtggtaacctgcgcctccgtcttatcaatcgatgatgtacactg
gccagagctgatcgacgagtacaagcaatgtatcaaggtcgtggcctgtt
ttgacctcacatggagcgtttgtttggtacaaaaggtcgacaaccctcct
ccacgagaacgaagggcattgaaggttctgttcgcgagaagggatgtaga
gagcgaggatggtggagacagcgagttattggcacgatgcgattgcatga
aaacccaatcgatgggcttcccttgtcgccacattatgaatgtgccatgg
tttacggggatatggccgaacagattccccgtttgagggaggttcttgat
gattatattgaagtggaaggtttctttgatgactactggaaGTCAGATTC
AGAGCAATTTGACTATCTTCGGGTCTGCGATCTACGAAAAGAGGCGCGTG
TCCTGGACATGATCAGTCTACGGAATGTAATGGTATCGAACGGTGATGAG
AAGTCCGAGGTAGTTGCCCAGGATATTGATTCTTTTTTGAAGACGGTGGC
GGAGGAGGAGGTCGGCACTTGCGTAAAATGGTCTGATGCCCAGGCAATGT
TTGACCAAATTAGGCGCGTAACATCGGGTATGGGTCCGTATGCGGTTAAC
CACTTTCAGCAGGTATTGAACATAGCAATGGAGAGCTACAAGCAGGGAAG
TTTACCGTCTCTTTCTGTGTTCAAGACATTCAAAGTGGGCGAAAATCCCA
ATGCACAGAAAGAATTAGTGCGGTGGGAGAACAGTTCAGTACCCTTTATC
CAAGCTCCGAACAAAGCCAACGTTAAGATTGTGAAACGAAGGAAGAGCTA
CACGGAACGCTTTAGAGCGAAAAAGGCGAAGGTAATTGGATGTGGTGAGG
AGCGCTACGAATGCTCCCAGGACGAGCATTCACAAGACAGGTATGGATCG
CAAGCCCAAATACAATCTTCGCGGGGTCGAAGCGAACATACCCGAGCCGC
TGTAGATAATGCATTAAGTTTAGCGCTCAGTATCGTGGAGAATAGAGACA
ATTAG back to topCoding sequence (CDS) from alignment at tig00000172_pilon:188020..192424+ >Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2031bp|location=Sequence derived from alignment at tig00000172_pilon:188020..192424+ (Gracilaria gracilis GNS1m male) ATGGCTTCGATTTTCTTTGAAACTAACGATGTAACCGAGTGTATGATTAT GGACTATCGCCGGAATCAACGCGCTCATTATTTCCAGGAACGTGATGTTG GGCGTTCAAGGCTGAAAAGCTTGCGGAATCCCCTGCTACGACGCTCCGAC TTCAGTTTACCCTTCGAGGTAAGGACACTGACCCCAGTATCCGTTATAAA TGGATATGCAGCAGGCGACAAAGTGGTTGATCTATCAGTAGATGATAGAA AGAAGATAGTTCAGAACAATCACAGTGCTGGTATCGATGTTCCTCTGGCG GAGAGTGCCAGAAATACATATGGAGTTTATGAAGGCAGTGCTACAGGGGC GGAACAGAAAGAAATTGGACGTAATGGGAGTAACGCAGATGATTCTCTCC ATAGCTCGGGCGCTCTAATCGAGACGCCTATCCCTCACGACGCAGTGCAG CGACCTACCTCTCTGAAAGAGGTAAAGAAGAGTCGAGAATACATTCGCTC TGAAGTACGCAGGAGAGTACAGTATGAGAATGCTCATTTACCGCCTGTTT GCCGCAGAATCTCAAGGCCCAAAGTCAGGTTTCTGGATTCGGAAAAGCGA GCTGAGCGAAAGGCAATTGTAAAGCAGGTGCTTCAAGACGTTCTACAAGA CGTTTTATCGTGCTCCCTACACGGAATACTACCTCCTGAGGAAGAGAAGG ACAGTCGTCAGCTTCCTACCCTTGTATCTCGAGATGGACAGCCGCTTCCA ATTCAACCGAGGCCAGTGGCGTCGCGACCAATTCTGCGTCCTGTATCGGT GGTCGTACGTACTCCAGCACCTTCGATCATGAACGACGTTGTTGGCCCAT ATGGAAATGGAGCTCTGGGTGATGATGCCGACCGTACCTCGGAGGCCTTT GGAACTGACGTCGGTGGAGTATGTTGTGGAGAGAATGACGTCACGGAGGA AATTGACGTCAACGATTCAAGTAAAAATTGTTTCGTTCAGAGTGGCATAC CGTTAATCACCGAAGAGACTAAGACAGGCCAGTCGCAGACGATATTTGGA GGGGACCCCGTCCTGGAGTTTAACCGTGAGGAACGAGACACTCTGGTAAC GGCCCTGTCGCATGGTGAAGTGGGAGACATACCAACCATGACGCAGTACG TACAGCAACGAGCCAGTGAAGACGGGTCCGAACTCATTGAACAGTTCTTG TTCTTAGATGAAAACGAAGAAGTGCCCAATGAACTCATCGTCATACCAAA GGTGGAAGATGAACCAGATAAAAACATCACGCCGAGCTCTGAAGGAACAG ATACTGGTAGCACCAATGAAGATGATGGCGAAGGAGATACACAGGAGCTC GACGTTCATGATGTTTTTAAAGCGGCTGTTATATCTTATTTCAGAAGCTT GGATGTCCATGCTCCCGAGGCGCGTGTCCTGGACATGATCAGTCTACGGA ATGTAATGGTATCGAACGGTGATGAGAAGTCCGAGGTAGTTGCCCAGGAT ATTGATTCTTTTTTGAAGACGGTGGCGGAGGAGGAGGTCGGCACTTGCGT AAAATGGTCTGATGCCCAGGCAATGTTTGACCAAATTAGGCGCGTAACAT CGGGTATGGGTCCGTATGCGGTTAACCACTTTCAGCAGGTATTGAACATA GCAATGGAGAGCTACAAGCAGGGAAGTTTACCGTCTCTTTCTGTGTTCAA GACATTCAAAGTGGGCGAAAATCCCAATGCACAGAAAGAATTAGTGCGGT GGGAGAACAGTTCAGTACCCTTTATCCAAGCTCCGAACAAAGCCAACGTT AAGATTGTGAAACGAAGGAAGAGCTACACGGAACGCTTTAGAGCGAAAAA GGCGAAGGTAATTGGATGTGGTGAGGAGCGCTACGAATGCTCCCAGGACG AGCATTCACAAGACAGGTATGGATCGCAAGCCCAAATACAATCTTCGCGG GGTCGAAGCGAACATACCCGAGCCGCTGTAGATAATGCATTAAGTTTAGC GCTCAGTATCGTGGAGAATAGAGACAATTAG back to top
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