Ggra5339.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5339.t1
Unique NameGgra5339.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length677
Homology
BLAST of Ggra5339.t1 vs. uniprot
Match: A0A2V3IYB0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB0_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 3.350e-22
Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = 0
Query:  479 MISLRNVMVSNGDEKSEVVAQDIDSFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNIAMESYKQGSLPSLSVFKTFKVGENPNAQKELVRWENSSVPFIQAPNKANVKIVKRRKS 608
            M+ L+  M +   E+ E   +DID FL+  +E EV  CVK SD+QA+FDQI+RVT  +GPYA +HFQQVL  A+ +Y +  L S+  FK ++   NP      + W    +  ++ P KAN++IVKR+K+
Sbjct:    1 MMRLKEKMGTEDVERGETY-EDIDQFLERPSEREVRICVKCSDSQALFDQIKRVTCSLGPYAEDHFQQVLLTAIHNYNEVRLLSIIRFKIYEHCNNPEKDFGGIEWATGRIHVVKPPEKANLRIVKRKKA 129          
BLAST of Ggra5339.t1 vs. uniprot
Match: A0A2V3IYY1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYY1_9FLOR)

HSP 1 Score: 62.8 bits (151), Expect = 1.360e-7
Identity = 41/129 (31.78%), Postives = 65/129 (50.39%), Query Frame = 0
Query:  498 AQDIDSFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNIAMESYKQGSLPSLSVFKTFK-VGENPNAQKELVRWEN----SSVPFIQAPNKANVKIVKRRKSYTERFRAKKAKVI 621
            A D+D  L    E EV   VKWSD   +F+Q+  +   +GP  V  F ++L        +  + + ++   F  V E    +K  V   +    +++  +  PN+AN K+ KR+KS+TER  AKK K+I
Sbjct:   12 ASDVDLVLHKTTENEVRKHVKWSDNHVIFNQVHTLVRFIGPAEVEDFMELLKELQRRLNRVKMVTKNMLDEFHTVMEQYPREKNRVTIRDVDGQTAMTSLLPPNRANSKLTKRKKSFTERLHAKKHKLI 140          
BLAST of Ggra5339.t1 vs. uniprot
Match: A0A2V3IR58 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR58_9FLOR)

HSP 1 Score: 57.4 bits (137), Expect = 2.290e-6
Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 0
Query:  574 NPNAQKELVRWENSSVPFIQAPNKANVKIVKRRKSYTERFRAKKAKVIGCGEERYECSQDEHSQDRYGSQAQIQSSRGRSEHTRAAVDNALSLALSIVENRD 675
            NP     ++ W N  +P I++PNKANV+IVKR++S+TE F AKK +V    +       ++HSQ +Y + A         E     ++ A+  AL I E  D
Sbjct:   35 NPEQDFGVIEWANGRIPVIKSPNKANVRIVKRKESFTEWFTAKKKRVTNGDDV------NDHSQSQYSAAA---------EPLGTEINEAVEKALHIFEKHD 121          
The following BLAST results are available for this feature:
BLAST of Ggra5339.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYB03.350e-2242.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYY11.360e-731.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IR582.290e-635.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000172_piloncontigtig00000172_pilon:188020..192424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5339.t1Ggra5339.t1Gracilaria gracilis GNS1m malemRNAtig00000172_pilon 188020..192424 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5339.t1 ID=Ggra5339.t1|Name=Ggra5339.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MASIFFETNDVTECMIMDYRRNQRAHYFQERDVGRSRLKSLRNPLLRRSD
FSLPFEVRTLTPVSVINGYAAGDKVVDLSVDDRKKIVQNNHSAGIDVPLA
ESARNTYGVYEGSATGAEQKEIGRNGSNADDSLHSSGALIETPIPHDAVQ
RPTSLKEVKKSREYIRSEVRRRVQYENAHLPPVCRRISRPKVRFLDSEKR
AERKAIVKQVLQDVLQDVLSCSLHGILPPEEEKDSRQLPTLVSRDGQPLP
IQPRPVASRPILRPVSVVVRTPAPSIMNDVVGPYGNGALGDDADRTSEAF
GTDVGGVCCGENDVTEEIDVNDSSKNCFVQSGIPLITEETKTGQSQTIFG
GDPVLEFNREERDTLVTALSHGEVGDIPTMTQYVQQRASEDGSELIEQFL
FLDENEEVPNELIVIPKVEDEPDKNITPSSEGTDTGSTNEDDGEGDTQEL
DVHDVFKAAVISYFRSLDVHAPEARVLDMISLRNVMVSNGDEKSEVVAQD
IDSFLKTVAEEEVGTCVKWSDAQAMFDQIRRVTSGMGPYAVNHFQQVLNI
AMESYKQGSLPSLSVFKTFKVGENPNAQKELVRWENSSVPFIQAPNKANV
KIVKRRKSYTERFRAKKAKVIGCGEERYECSQDEHSQDRYGSQAQIQSSR
GRSEHTRAAVDNALSLALSIVENRDN*
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