Ggra6221.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6221.t1
Unique NameGgra6221.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length136
Homology
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BLAST of Ggra6221.t1 vs. uniprot
Match: A0A2V3IVQ7 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVQ7_9FLOR)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-6
Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 0 
Query:   35 VHAAVVRFPSTLLLSPFSQMPVLEQLVVSEAVGKGPTPLEPVLCMHHALRLYCPHLQTAR 94
            V A V+RFPS LL S FSQ+P L+ ++V+EA+  GP+PL  +  +  ALRL C  LQ+ +
Sbjct:  441 VSADVLRFPSPLLFSLFSQLPALQHVIVTEALASGPSPLATLPSLLRALRLSCRQLQSVQ 500
The following BLAST results are available for this feature:
BLAST of Ggra6221.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVQ71.090e-648.33F-box domain-containing protein n=1 Tax=Gracilario... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:200399..200806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6221.t1Ggra6221.t1Gracilaria gracilis GNS1m malemRNAtig00000167_pilon 200399..200806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6221.t1 ID=Ggra6221.t1|Name=Ggra6221.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=136bp
MRQLRRLSSSSLRTVQVQTDAATAVIVSVFRVASVHAAVVRFPSTLLLSP
FSQMPVLEQLVVSEAVGKGPTPLEPVLCMHHALRLYCPHLQTARLQTVRL
QTVRLPYPAYAAYKGRKLQAIGCGLTVGKKCSDGP*
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