Ggra4920.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A2V3IFB2 (Protein LSM12-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB2_9FLOR) HSP 1 Score: 265 bits (676), Expect = 4.810e-88 Identity = 130/184 (70.65%), Postives = 151/184 (82.07%), Query Frame = 0
Query: 1 MDARPQPGMKFETGKSIAVHLKDGSLLRGFVHAEDKGAGLLCLELIPSAQIALVSLVNIKSTSPYSHPTHSRKWPSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITSGTDANGVKP 184
MDARPQPGMKFE GK IA+ L DGS LRGFVHAEDKGA LLCLELIPSA++ALVS+VNIKS SP + +RKWPSNF++DL+KLRA+ERR+ EK E +FNK+GVGV+P AQAIFD L KTMP +WDG+DILILD+VRL PY K +S GD V+ERVKMILE EAH+I + TDANGVKP
Sbjct: 1 MDARPQPGMKFEVGKPIAIQLNDGSFLRGFVHAEDKGAALLCLELIPSAKVALVSIVNIKSASPLTQIADTRKWPSNFHIDLAKLRAEERRICEKREAEFNKLGVGVSPSAQAIFDTLAKTMPCKWDGEDILILDTVRLAPPYNAKCLS----GDTGVVERVKMILENEAHSIRNATDANGVKP 180
BLAST of Ggra4920.t1 vs. uniprot
Match: R7QH47 (LSM12 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH47_CHOCR) HSP 1 Score: 169 bits (428), Expect = 1.440e-50 Identity = 82/174 (47.13%), Postives = 113/174 (64.94%), Query Frame = 0
Query: 9 MKFETGKSIAVHLKDGSLLRGFVHAEDKGAGLLCLELIPSAQIALVSLVNIKSTSPYSHPTHSRKWPSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITSGTDANGV 182
M FE GK ++V L DG+ L+GFVHAED AGL+CLELIPSA + L+ + N+KS +P SRKWP+N ++DL +L+A++ R++ K +F IGVGVTP QA+FDVL KT+P W+G I++ +VRL PY +K+I RV+M+LER T + NGV
Sbjct: 1 MAFEVGKPLSVQLVDGTALKGFVHAEDAAAGLVCLELIPSADLTLLPISNVKSATPIPDLADSRKWPANLDVDLPRLKAEQERIFRKRHIEFTHIGVGVTPEGQAVFDVLAKTLPCEWEGNVIVVFGTVRLGPPYDIKSI------------RVRMVLERRTRTPRPAEETNGV 162
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A2R6P3K0 (AD domain-containing protein n=4 Tax=Actinidia TaxID=3624 RepID=A0A2R6P3K0_ACTCC) HSP 1 Score: 83.6 bits (205), Expect = 7.690e-17 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 0
Query: 1 MDARPQPGMKFETGKSIAVHLKDGSLLRGFVHAEDKGAGLLCLE------LIPSAQIALVSLVNIKSTSPYSH---PTHSRKWPSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITS 175
MDA G +F G +++ G G + D+ + +L L+ P I L+ IK S P +S+K LDLS L+A E + E + ++GVGVTP AQ+IFD L KT+P RWD I++++ VR+++PY ++++ G ERV+ +LE E + S
Sbjct: 1 MDANSFGGEEFAVGCILSIKTTLGDEFDGQIITFDRPSNILVLQEGIKSVSGPRRNIRLLKANYIKEFSYLGQAEDPLNSKKC----YLDLSALQAREESAIRQAEIEAERLGVGVTPVAQSIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLPESVAG---GTPAANERVRKVLELERKRLQS 177
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A0D9VKW1 (AD domain-containing protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VKW1_9ORYZ) HSP 1 Score: 79.7 bits (195), Expect = 2.920e-15 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 0
Query: 75 PSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITSGTDANGV 182
P+ LDLS + A E + E +IGVGVTP AQ+IFD L KT+P +WD DI+++ VR+ PY + +S G + ERVK ++++ HTI G + G+
Sbjct: 91 PAGCVLDLSAIHAREEAALRQAEIDAERIGVGVTPEAQSIFDALSKTLPVQWDKTDIVVMKEVRVCNPYLPENVSG---GTSAANERVKKVVKKP-HTICCGVQSVGL 194
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A7C8YUS8 (AD domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YUS8_OPUST) HSP 1 Score: 78.6 bits (192), Expect = 7.700e-15 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 0
Query: 77 NFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITS 175
N +DL+ LRA E + E + +IGVGVTP AQ+IFD L KT+P RWD I+++D VR+ +PY ++++ G ERV+ +LE E + S
Sbjct: 93 NCYVDLNSLRAREESAIRQAEIEAERIGVGVTPEAQSIFDALSKTLPVRWDKTAIVVMDEVRVCSPYLPESVTG---GTPAANERVRKVLEFERKRLHS 188
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A3L6QCJ5 (AD domain-containing protein n=6 Tax=Panicoideae TaxID=147369 RepID=A0A3L6QCJ5_PANMI) HSP 1 Score: 77.8 bits (190), Expect = 1.910e-14 Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 0
Query: 75 PSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILERE 169
P+ LDL + A E + E + +IGVGVTP AQ+IFD L KT+P +WD DI+++ VR+ +PY + +S G A ERVK +++ E
Sbjct: 100 PAGCTLDLDAIYAREEAALRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTDIIVMKEVRVRSPYMPENVSG---GTAAANERVKKVIDFE 191
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A1D6QER0 (RNA-processing Lsm domain n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6QER0_MAIZE) HSP 1 Score: 76.3 bits (186), Expect = 2.580e-14 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 0
Query: 75 PSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITS 175
P++ LDL+ + A E + E + +IGVGVTP AQ+IFD L KT+P +WD DI+++ VR+ +PY + ++ G A ERVK +++ E + S
Sbjct: 50 PASCMLDLNSIYAREDAALRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTDIVVMKEVRVRSPYLPENVNG---GTAAANERVKKVIDFERKRLHS 147
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A4D9C8I4 (AD domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9C8I4_SALSN) HSP 1 Score: 75.9 bits (185), Expect = 3.530e-14 Identity = 50/156 (32.05%), Postives = 77/156 (49.36%), Query Frame = 0
Query: 20 HLKDGSLLRGFVHAEDKGAGLLCLELIPSAQIALVSLVNIKSTSPYSHPTHSRKWPSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITS 175
+LK SL GAG P I L+ IK + H F LDL+ L++ E + E + +IGVGVTP AQ++FD L KT+P RWD I++++ VR+++PY ++++ G ERV+ ++E E + S
Sbjct: 4 YLKKSSLTLKSQEESKSGAG-------PKRNIRLLKANYIKEFAFLGHAEDPLDANKCF-LDLNTLQSKEESAIRQAEAEAERIGVGVTPQAQSLFDALFKTLPVRWDKSTIVVMNEVRVSSPYLPESVTG---GTPAANERVRKVVEFEKKRLQS 148
BLAST of Ggra4920.t1 vs. uniprot
Match: A0A1D6HJY5 (Rho-related protein from plants 1 n=6 Tax=Poaceae TaxID=4479 RepID=A0A1D6HJY5_MAIZE) HSP 1 Score: 79.0 bits (193), Expect = 7.460e-14 Identity = 55/191 (28.80%), Postives = 89/191 (46.60%), Query Frame = 0
Query: 8 GMKFETGKSIAVHLKDGSLLRGFVHAEDKGAGLLCLELIPSAQIALVSLVNIKSTSPYSHPTHSRKW-----------------------PSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILEREAHTITS 175
G +F G ++ G G + A D+ + LL + ++P + + LV+ ++I + R+ P+ LDL+ + A E + E + KIGVGVTP AQ IFD L KT+P +WD DI+++ VR+ +PY + +S G A ERVK +++ E + S
Sbjct: 313 GEEFAIGVVLSAKTTLGEEFEGQIVAFDRPSNLLVIHILPKS-LMLVTRISISQEGVGRAESGERRNVRVLKANYIREFSVLSKGDDPLDPAGCMLDLNSIYAREDAALRQAEIEAEKIGVGVTPEAQNIFDALSKTLPVQWDKTDIVVMKEVRVRSPYLPENVSG---GTAAANERVKKVIDFERKRLHS 499
BLAST of Ggra4920.t1 vs. uniprot
Match: K3YZ15 (AD domain-containing protein n=14 Tax=PACMAD clade TaxID=147370 RepID=K3YZ15_SETIT) HSP 1 Score: 76.3 bits (186), Expect = 7.970e-14 Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0
Query: 75 PSNFNLDLSKLRADERRMYEKHERQFNKIGVGVTPFAQAIFDVLDKTMPSRWDGKDILILDSVRLTAPYTVKTISSERSGDAKVMERVKMILERE 169
P LDL + A E + E + +IGVGVTP AQ+IFD L KT+P +WD DI+++ VR+ +PY + +S G A ERVK +++ E
Sbjct: 105 PPGCMLDLDAIYAREEAALRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTDIIVMKEVRVRSPYLPENVSG---GTAAANERVKKVIDFE 196 The following BLAST results are available for this feature:
BLAST of Ggra4920.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4920.t1 ID=Ggra4920.t1|Name=Ggra4920.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=185bpback to top |