Ggra9889.t1 (polypeptide) Gracilaria gracilis GNS1m male
Overview
Homology
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A2V3ITR4 (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITR4_9FLOR) HSP 1 Score: 487 bits (1254), Expect = 3.740e-172 Identity = 245/285 (85.96%), Postives = 268/285 (94.04%), Query Frame = 0 Query: 6 ASSFTIFRPKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAA 290 ++SFTI RPKR+SDN + V+RL+HVPIT+PGS IPTEDHSVRARGTLLS ESGNVLTATRAGVISRVNKLVMVMPLR+RYIPETGDVVVGRVVEI NKRYK+DVNATKHAFLLLTAINLPGGV RRRNQEDELNMR+YFKEGDLVSAEVQE RKDG+VALHTRSLRYGKL+ GQLV VQSELVKRAKKHFHELPCGVHTILGNNG++FLS +KG +S+EMRRRIARV+NSILALDSEFIAIGPDTIMDVY+TSL N VEVKDMC PDV++SIC+GARSMR+AA Sbjct: 8 SASFTILRPKRLSDNAEPVSRLSHVPITSPGSVIPTEDHSVRARGTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSRYIPETGDVVVGRVVEIANKRYKMDVNATKHAFLLLTAINLPGGVHRRRNQEDELNMRQYFKEGDLVSAEVQERRKDGSVALHTRSLRYGKLSAGQLVTVQSELVKRAKKHFHELPCGVHTILGNNGFIFLSQTRKGAISLEMRRRIARVANSILALDSEFIAIGPDTIMDVYQTSLANGVEVKDMCTPDVVKSICVGARSMREAA 292
BLAST of Ggra9889.t1 vs. uniprot
Match: R7Q340 (KH_dom_type_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q340_CHOCR) HSP 1 Score: 365 bits (936), Expect = 7.520e-124 Identity = 189/286 (66.08%), Postives = 225/286 (78.67%), Query Frame = 0 Query: 8 SFTIFRPKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQK---GPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAA 290 +F+I RP S A L+H+PIT PGS+IPTED SVRARGTLLS+T S VLTAT AGVI+RVNKLVMV PLRA+YIPETGDVV+GRV ++ +R+++DVNA +HA LLL+A+NLPGG+QRRR +DELNMR +F EGDLVSAEVQE DG VALHTRSLRYGKL+GG V VQ ELVKRAKKHFH L CGVH ILGNNGY+FL+ + G + EMR+ +ARV N++LALD+EFIAIGPDTIM VY S+ VE++DM +PD+ IC GARSMR AA Sbjct: 5 TFSIVRPPPPST---ASAPLSHIPITIPGSTIPTEDLSVRARGTLLSTTGSTRVLTATVAGVITRVNKLVMVRPLRAKYIPETGDVVIGRVTDLAGRRWRLDVNAARHAILLLSAVNLPGGIQRRRTYQDELNMRAFFTEGDLVSAEVQEQWDDGCVALHTRSLRYGKLSGGTFVPVQPELVKRAKKHFHRLDCGVHAILGNNGYIFLAERAEKEGGATTPEMRKMVARVRNAVLALDTEFIAIGPDTIMSVYDASIEEGVELRDMTRPDITAKICEGARSMRAAA 287
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A2V3IQJ5 (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ5_9FLOR) HSP 1 Score: 354 bits (908), Expect = 9.760e-119 Identity = 193/289 (66.78%), Postives = 226/289 (78.20%), Query Frame = 0 Query: 6 ASSFTIFRPKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYG----KLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAA 290 ++SFTI RPKR+SDN +AV+RL+HVPIT+PGS I TEDHSVR R TLLS ESGNVLTATRAG ISRVNKLVMV+PL +RYI ETGDVV GRVVEI +KRYK+DVNATK AFLLLTAI LPGGV RRRNQEDELNMR+Y ++ + ++ + T A + YG + GGQLV +QSELVKRAKKHFHELPCGVH L +NG+VFLS +K + +++ RI RVSN+ILALDSEF AIGPDTIM Y TS N +EVKDMC PDV++ I MGARSMR+AA Sbjct: 8 SASFTILRPKRLSDNAEAVSRLSHVPITSPGSVILTEDHSVRVRRTLLSCGESGNVLTATRAGFISRVNKLVMVVPLCSRYILETGDVVGGRVVEIASKRYKMDVNATKLAFLLLTAIKLPGGVHRRRNQEDELNMREYCISKRVIWSVLKFRNDEKTAASPSTRECYGIESCPVDGGQLVTLQSELVKRAKKHFHELPCGVHMTLRDNGFVFLSQTRKNAILLQIWWRIGRVSNNILALDSEFNAIGPDTIMYAYETSPANGMEVKDMCTPDVVKIIGMGARSMREAA 296
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A2V3IW84 (Exosome complex component RRP4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW84_9FLOR) HSP 1 Score: 349 bits (896), Expect = 6.450e-117 Identity = 193/285 (67.72%), Postives = 215/285 (75.44%), Query Frame = 0 Query: 6 ASSFTIFRPKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSMQKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAA 290 ++SFTI RPKR+SDN +AV+RL+HVPIT+PGS I EDHSVRAR TLLS ES NVLTAT AGVISRVNKLVMVMPLR+RYI ETG VV GRVVEI +KRYK+DVNATK AFLLLTAI LPG V RRRNQEDELNMR+YFKEGDL LV +QSELVKRAKKHFHELPCGVH L NNG+VFLS +K + +E+ RIARVSN+ILALDSEF IGPDTIM Y TSL N +EVKDMC PDV++ I MGAR MR+AA Sbjct: 8 SASFTILRPKRLSDNAEAVSRLSHVPITSPGSVILAEDHSVRARRTLLSCGESENVLTATHAGVISRVNKLVMVMPLRSRYILETGVVVGGRVVEIASKRYKMDVNATKIAFLLLTAIKLPGNVHRRRNQEDELNMREYFKEGDL------------------------------LVTLQSELVKRAKKHFHELPCGVHMTLHNNGFVFLSQTRKDAILLEIWWRIARVSNNILALDSEFNEIGPDTIMYAYETSLANGMEVKDMCTPDVVKIIGMGARPMREAA 262
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A2V3IDP5 (Exosome complex component rrp4 n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDP5_9FLOR) HSP 1 Score: 264 bits (674), Expect = 2.300e-85 Identity = 139/175 (79.43%), Postives = 156/175 (89.14%), Query Frame = 0 Query: 6 ASSFTIFRPKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQ 180 ++SFTI RPKR+SDN +AV+RL+HVPIT+PGS I TEDHSVRAR TLLS ESGNVLTATRAGVISRVNKLVMVMPLR+ YI ETGDVV GRVVEI +K YK+DVNATK AFLLLTAI LPGGV+RRRNQEDE+NMR+ F+EGDLVSAEVQE RKDG+VALH R LRY KL+GG+ Sbjct: 8 SASFTILRPKRLSDNAEAVSRLSHVPITSPGSVILTEDHSVRARRTLLSCGESGNVLTATRAGVISRVNKLVMVMPLRSPYILETGDVVGGRVVEISSKLYKMDVNATKLAFLLLTAIKLPGGVRRRRNQEDEINMRESFREGDLVSAEVQERRKDGSVALHARMLRYRKLSGGR 182
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A1X6NNN7 (KH_dom_type_1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNN7_PORUM) HSP 1 Score: 251 bits (642), Expect = 2.910e-78 Identity = 153/335 (45.67%), Postives = 192/335 (57.31%), Query Frame = 0 Query: 13 RPKRVSDNTDAV-------NRLAHVPITAPGSSIPTEDHSVRARGTLLSST------------------ESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLS-------------SMQKGP-------------------LSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAA 290 RP R + T AV + L+HVP+ G I E +R GT L++ + G L AT GV+ RVN+LV V PLR+RY P+ GDVVV RVV+I KR++ DV +HA L L+A+NLPGGVQRRR DE NMR+ F+EGDL+SAEVQE R DG +ALHTRSL+YGKL GG LV+ LVKR+KKHFH L CGV ILGNNGY++LS +M++ L VE+R +ARV N+I ALD +F+AI TIMDV+ S T V+V DM +P V+ I AR R A Sbjct: 30 RPARAMEVTRAVRPPPRSTDHLSHVPVVVTGDGIAVEPGFLRGHGTQLTAAGVAXXXXXXXXXXXXXTPDDGRALRATLTGVVKRVNQLVAVAPLRSRYAPQVGDVVVARVVDIAAKRWRCDVAGQQHAALALSAVNLPGGVQRRRTAADERNMRELFEEGDLLSAEVQELRHDGGIALHTRSLKYGKLVGGVLVVASPALVKRSKKHFHLLGCGVWAILGNNGYIWLSPTDPAGGRGAARDAMEEADESDGGAADGGDAAAPVDAELGVEVRLTLARVRNAIAALDQQFVAIHAATIMDVFDASETAGVDVADMSRPAVVELITATARERRVVA 364
BLAST of Ggra9889.t1 vs. uniprot
Match: M2XZF0 (Ribosomal RNA-processing protein 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZF0_GALSU) HSP 1 Score: 243 bits (620), Expect = 8.530e-76 Identity = 126/272 (46.32%), Postives = 178/272 (65.44%), Query Frame = 0 Query: 34 APGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYV-----------------FLSSMQKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRD 288 APG I +++ VR GT++ G LT+T AG++ RVNKLV V+P+RARY E GDV+VGR+ +I ++R+K+DVN+ + A LLL+A+NLPGGVQRRR EDEL MR++F + DL+SAEVQE ++DG + LHTRSL+YGKL G + V +LVKR+KKHFH L CGVH ILG+NGYV F + ++E R + RV NSI LD F++I P+TIM +Y ++ + V+ M +PD++ I ++ ++ Sbjct: 32 APGDDILSQESVVRGHGTMV----QGTRLTSTVAGIVERVNKLVAVLPIRARYSAEVGDVIVGRIRDIVSRRWKVDVNSRQDAVLLLSAVNLPGGVQRRRTYEDELKMREFFDQDDLISAEVQELKQDGLIMLHTRSLKYGKLENGIFISVTPQLVKRSKKHFHRLSCGVHIILGDNGYVWIYVDDAAYGEDEEEANFSKRRENDKSNLEQRLSLIRVRNSICILDLYFLSIQPETIMLIYEETIRRNIPVQHMLRPDIINDIYRTVKNTKE 299
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A3P3YCJ4 (Ribosomal RNA-processing protein 4 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YCJ4_PLABS) HSP 1 Score: 235 bits (599), Expect = 1.550e-72 Identity = 130/274 (47.45%), Postives = 174/274 (63.50%), Query Frame = 0 Query: 14 PKRVSDNTDAVNRLAHVPITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELP-CGVHTILGNNGYVFLSSMQKGP---LSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGA 283 P R T ++ L P +PG I TE + GT L E L AT AG + +VNKL+ V PL RY + GDVV+GRV ++G+KR+K+D+N+ + L+L++I+LPGGVQRRR QED L MR++F+EGDL+SAEVQ DG VALHTRS +YGKL GQ V+V+ LVKR K+HF LP C V ILGNNGY++++ G S E R+++ARV SI+ALD F+AI PD++MDVY S+ V D+ D + + A Sbjct: 29 PCRTLYRTMSIRSLHANPFVSPGEVITTESGFLWGHGTKLG--EEDKQLRATVAGFVEQVNKLLTVRPLTQRYAGDIGDVVIGRVTQVGDKRWKVDINSRQDGILMLSSIHLPGGVQRRRTQEDSLQMREFFEEGDLISAEVQNFYHDGAVALHTRSSKYGKLNRGQFVVVRQALVKRCKQHFVTLPDCNVDIILGNNGYIWITESSDGSGAGESAERRQQMARVRQSIVALDRMFVAIFPDSVMDVYHDSIDLGVSPADITHRDYIHRVTQKA 300
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A0H5R9W4 (Ribosomal RNA-processing protein 4 (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R9W4_9EUKA) HSP 1 Score: 220 bits (561), Expect = 2.870e-67 Identity = 121/245 (49.39%), Postives = 156/245 (63.67%), Query Frame = 0 Query: 31 PITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELP-CGVHTILGNNGYVFLSSMQKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPD 274 P APG I TE + GT L E+ +L A+ AG + +VNKL+ V PL RY E GDV+VGRVV IG+KR+++D+N+ + L+L+AI+LPGGVQRRR ED L MR F EGDL+SAEVQ DG +ALHTR+ +YG L G V+V+ LVKR K+HF LP V I GNNGY+++ P S E R+ARV I+ALD F++I PDT+MDVY SL V ++ PD Sbjct: 13 PFVAPGDVITTESGFLWGHGTKLD--ETNKLLRASVAGFVEQVNKLLTVRPLTQRYSGEIGDVIVGRVVGIGDKRWRLDINSRQDGVLMLSAIHLPGGVQRRRTDEDSLQMRSVFDEGDLISAEVQSFYADGAIALHTRTSKYGLLGKGMFVVVRQSLVKRCKQHFVRLPQVEVDVIFGNNGYIWIGEGDS-PASAEQLERMARVRRCIVALDRMFVSIFPDTVMDVYGDSLEMGVPASEITHPD 254
BLAST of Ggra9889.t1 vs. uniprot
Match: A0A0L0HQ67 (Ribosomal RNA-processing protein 4 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HQ67_SPIPD) HSP 1 Score: 220 bits (561), Expect = 7.150e-67 Identity = 125/279 (44.80%), Postives = 171/279 (61.29%), Query Frame = 0 Query: 32 ITAPGSSIPTEDHSVRARGTLLSSTESGNVLTATRAGVISRVNKLVMVMPLRARYIPETGDVVVGRVVEIGNKRYKIDVNATKHAFLLLTAINLPGGVQRRRNQEDELNMRKYFKEGDLVSAEVQEHRKDGTVALHTRSLRYGKLAGGQLVMVQSELVKRAKKHFHELPCGVHTILGNNGYVFLSSM-----------------QKGPLSVEMRRRIARVSNSILALDSEFIAIGPDTIMDVYRTSLTNAVEVKDMCKPDVMRSICMGARSMRDAAEVE 293 I PG + + +R GT TE + L A+ AGV+ RVNKL+ V PLR RY E GDVVVGR+ E+G +R+K+D+NA + A LLL+++NLPGGVQRR+ + DEL MR +F EGD++SAEVQ +DG +LHTRS++YGKL G LV+V S LVKR K HF LPCGV ILG NGY++++ + P+S R+ IARV +SI+AL I I+ + S+ + V KDM KPD+ + I + AR+ A ++ Sbjct: 31 IVTPGEVVTRDTAFMRGHGTY---TED-DALVASMAGVVDRVNKLISVRPLRTRYNGEIGDVVVGRITEVGPRRWKVDINARQDAVLLLSSVNLPGGVQRRKTESDELQMRSFFGEGDMLSAEVQAFFQDGAASLHTRSIKYGKLRNGSLVIVPSALVKRTKSHFATLPCGVDVILGLNGYIWVAKHVAISPEIVNQPDALYHNENEPISDAERQTIARVCSSIVALSRHNNFINDTMIVYTFEASMGHPV--KDMLKPDICQQIVLAARAQFREASLQ 303 The following BLAST results are available for this feature:
BLAST of Ggra9889.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9889.t1 ID=Ggra9889.t1|Name=Ggra9889.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bpback to top |