Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10878.t1.start1 | Ggra10878.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000125_pilon 279014..279016 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10878.t1.stop1 | Ggra10878.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000125_pilon 280898..280900 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=629bp
MSASNENESKSFNSRKLARNTASDASENEALDSIDAKQQREALVEHSTKP
QPSSRITLSNTSPKPWPMPAQNEKDASPTFRSLKERSAQDSESDFKTPQT
KFFASQNAQKSSMSSLPKSPPLEVSPVQEVFLDDVDLPSSRNIFSDSGNS
KGSKESIAVLFKRKNATRHREPEADVSAAFVDRYCSSPEEEVVSISEQES
GTFRFLKDDEVSPSSEKSFKFPSGLRNLFGDDGRNSSGRRSSRSRTPRSF
GLDSELFSPLKSTDGLGEPEGRSGGSRQGLSEPKALKASSNSSSKAALRR
PLGSRRKTFIDLSKPPLPEAVSPRLADRSIEEPSITEVEEVNKPRTSPSS
SKSTETSEEQIKVVSPLMTKGVIMRAQTHKTNVNGIRKAETGKIMSREEL
LGDRKVVFLRESPVPKSLNPAAFSEDDDVMTRRPSTLFQYSSSESEGGLP
NVSAHKLEADDGTFLGDKASLGYIYQEVQSSSSSKFSENGSSSGLVNRLG
SSFKKAKNVVARRSLTDIPELSTTDMIIPGTIDEAVCRICFVCRKKLGCR
VFVKNTGKKIKVEAEDRQRGYYLRASLFVSLLGGEEPACALNIRQSRADG
MKTSFATLWDFYQRLEKGLQELEAGHNR* back to topspliced messenger RNA >Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1887bp|location=Sequence derived from alignment at tig00000125_pilon:279014..280900+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCAGCAAGCAATGAAAATGAATCCAAGTCTTTCAACTCTCGAAAGTT
AGCCAGAAACACAGCAAGTGATGCGAGCGAAAATGAAGCGCTTGATTCCA
TTGACGCGAAACAACAACGTGAAGCCCTCGTTGAGCATTCGACCAAGCCG
CAGCCGAGCAGTAGGATAACTCTGAGCAACACAAGTCCAAAGCCGTGGCC
AATGCCTGCCCAGAACGAGAAGGACGCGTCACCAACTTTTCGGTCGTTGA
AAGAGCGAAGCGCGCAAGACTCGGAGAGCGACTTCAAGACCCCGCAAACA
AAGTTTTTCGCCTCGCAGAACGCCCAGAAGTCTTCAATGTCTTCTCTACC
CAAGTCCCCTCCGCTTGAGGTTTCGCCTGTGCAGGAAGTTTTTCTGGATG
ACGTCGATCTGCCCTCGTCCAGGAACATATTCTCCGATAGTGGGAATAGC
AAAGGCAGTAAGGAATCTATTGCGGTTCTGTTCAAGAGAAAGAATGCTAC
GAGGCATAGAGAACCTGAAGCTGACGTTTCCGCTGCATTTGTAGACAGGT
ACTGCTCAAGTCCAGAGGAAGAAGTGGTGTCAATCTCTGAACAAGAGAGT
GGCACATTTCGCTTTCTAAAGGATGATGAAGTAAGTCCAAGCAGCGAGAA
AAGCTTCAAGTTTCCTTCCGGTTTGAGGAACCTGTTTGGAGACGACGGAA
GAAACTCATCGGGACGAAGGTCTTCCAGGAGCCGAACGCCCCGCAGTTTT
GGACTTGATAGTGAGTTATTCTCTCCACTCAAGTCCACCGATGGGCTGGG
TGAACCTGAAGGCAGGAGTGGTGGAAGTCGACAAGGGCTATCCGAGCCAA
AAGCATTGAAAGCTTCATCCAATTCGTCATCAAAAGCTGCTTTGCGGAGA
CCGTTGGGAAGTCGAAGGAAGACTTTCATTGACCTTTCGAAACCACCGCT
ACCTGAAGCAGTTTCTCCACGATTGGCGGACCGATCCATAGAAGAACCAA
GTATCACCGAGGTAGAGGAAGTGAACAAGCCAAGAACCAGTCCAAGCAGT
AGCAAGTCAACTGAAACATCAGAGGAACAAATCAAAGTCGTGTCTCCGTT
GATGACCAAGGGTGTGATAATGCGAGCTCAAACTCACAAGACCAATGTAA
ATGGAATTCGGAAAGCGGAGACCGGCAAGATTATGAGCCGGGAAGAGTTG
CTTGGAGACCGCAAGGTAGTATTTCTTCGAGAAAGCCCAGTACCAAAGTC
GCTCAATCCCGCTGCGTTCAGCGAGGATGATGATGTTATGACAAGGAGAC
CATCTACACTCTTCCAGTATTCTAGCTCGGAAAGTGAGGGAGGGTTACCG
AACGTCAGTGCTCACAAGTTGGAAGCTGATGATGGGACGTTTTTGGGAGA
CAAGGCATCGCTGGGCTACATCTATCAAGAAGTGCAGAGCAGTAGTAGTT
CGAAGTTCTCCGAGAATGGCAGCTCTTCTGGTCTGGTGAATCGACTCGGG
TCAAGTTTCAAAAAGGCGAAGAACGTGGTAGCCAGACGATCTTTAACAGA
TATTCCAGAGCTCAGCACCACAGATATGATTATTCCAGGAACAATTGACG
AAGCTGTGTGCAGGATTTGTTTCGTATGCCGGAAAAAGTTGGGGTGCAGA
GTGTTTGTGAAGAACACTGGTAAGAAGATTAAGGTGGAAGCAGAGGATCG
ACAAAGAGGTTACTATCTCAGAGCATCTTTATTCGTGAGTTTGTTGGGAG
GCGAAGAACCTGCGTGTGCTCTAAACATTCGGCAGAGTAGAGCAGATGGG
ATGAAGACGAGCTTTGCAACATTATGGGATTTCTATCAACGACTCGAGAA
AGGCTTGCAAGAATTAGAAGCAGGGCACAACCGGTAG back to topprotein sequence of Ggra10878.t1 >Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=629bp
MSASNENESKSFNSRKLARNTASDASENEALDSIDAKQQREALVEHSTKP
QPSSRITLSNTSPKPWPMPAQNEKDASPTFRSLKERSAQDSESDFKTPQT
KFFASQNAQKSSMSSLPKSPPLEVSPVQEVFLDDVDLPSSRNIFSDSGNS
KGSKESIAVLFKRKNATRHREPEADVSAAFVDRYCSSPEEEVVSISEQES
GTFRFLKDDEVSPSSEKSFKFPSGLRNLFGDDGRNSSGRRSSRSRTPRSF
GLDSELFSPLKSTDGLGEPEGRSGGSRQGLSEPKALKASSNSSSKAALRR
PLGSRRKTFIDLSKPPLPEAVSPRLADRSIEEPSITEVEEVNKPRTSPSS
SKSTETSEEQIKVVSPLMTKGVIMRAQTHKTNVNGIRKAETGKIMSREEL
LGDRKVVFLRESPVPKSLNPAAFSEDDDVMTRRPSTLFQYSSSESEGGLP
NVSAHKLEADDGTFLGDKASLGYIYQEVQSSSSSKFSENGSSSGLVNRLG
SSFKKAKNVVARRSLTDIPELSTTDMIIPGTIDEAVCRICFVCRKKLGCR
VFVKNTGKKIKVEAEDRQRGYYLRASLFVSLLGGEEPACALNIRQSRADG
MKTSFATLWDFYQRLEKGLQELEAGHNR* back to topmRNA from alignment at tig00000125_pilon:279014..280900+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1887bp|location=Sequence derived from alignment at tig00000125_pilon:279014..280900+ (Gracilaria gracilis GNS1m male)
ATGTCAGCAAGCAATGAAAATGAATCCAAGTCTTTCAACTCTCGAAAGTT
AGCCAGAAACACAGCAAGTGATGCGAGCGAAAATGAAGCGCTTGATTCCA
TTGACGCGAAACAACAACGTGAAGCCCTCGTTGAGCATTCGACCAAGCCG
CAGCCGAGCAGTAGGATAACTCTGAGCAACACAAGTCCAAAGCCGTGGCC
AATGCCTGCCCAGAACGAGAAGGACGCGTCACCAACTTTTCGGTCGTTGA
AAGAGCGAAGCGCGCAAGACTCGGAGAGCGACTTCAAGACCCCGCAAACA
AAGTTTTTCGCCTCGCAGAACGCCCAGAAGTCTTCAATGTCTTCTCTACC
CAAGTCCCCTCCGCTTGAGGTTTCGCCTGTGCAGGAAGTTTTTCTGGATG
ACGTCGATCTGCCCTCGTCCAGGAACATATTCTCCGATAGTGGGAATAGC
AAAGGCAGTAAGGAATCTATTGCGGTTCTGTTCAAGAGAAAGAATGCTAC
GAGGCATAGAGAACCTGAAGCTGACGTTTCCGCTGCATTTGTAGACAGGT
ACTGCTCAAGTCCAGAGGAAGAAGTGGTGTCAATCTCTGAACAAGAGAGT
GGCACATTTCGCTTTCTAAAGGATGATGAAGTAAGTCCAAGCAGCGAGAA
AAGCTTCAAGTTTCCTTCCGGTTTGAGGAACCTGTTTGGAGACGACGGAA
GAAACTCATCGGGACGAAGGTCTTCCAGGAGCCGAACGCCCCGCAGTTTT
GGACTTGATAGTGAGTTATTCTCTCCACTCAAGTCCACCGATGGGCTGGG
TGAACCTGAAGGCAGGAGTGGTGGAAGTCGACAAGGGCTATCCGAGCCAA
AAGCATTGAAAGCTTCATCCAATTCGTCATCAAAAGCTGCTTTGCGGAGA
CCGTTGGGAAGTCGAAGGAAGACTTTCATTGACCTTTCGAAACCACCGCT
ACCTGAAGCAGTTTCTCCACGATTGGCGGACCGATCCATAGAAGAACCAA
GTATCACCGAGGTAGAGGAAGTGAACAAGCCAAGAACCAGTCCAAGCAGT
AGCAAGTCAACTGAAACATCAGAGGAACAAATCAAAGTCGTGTCTCCGTT
GATGACCAAGGGTGTGATAATGCGAGCTCAAACTCACAAGACCAATGTAA
ATGGAATTCGGAAAGCGGAGACCGGCAAGATTATGAGCCGGGAAGAGTTG
CTTGGAGACCGCAAGGTAGTATTTCTTCGAGAAAGCCCAGTACCAAAGTC
GCTCAATCCCGCTGCGTTCAGCGAGGATGATGATGTTATGACAAGGAGAC
CATCTACACTCTTCCAGTATTCTAGCTCGGAAAGTGAGGGAGGGTTACCG
AACGTCAGTGCTCACAAGTTGGAAGCTGATGATGGGACGTTTTTGGGAGA
CAAGGCATCGCTGGGCTACATCTATCAAGAAGTGCAGAGCAGTAGTAGTT
CGAAGTTCTCCGAGAATGGCAGCTCTTCTGGTCTGGTGAATCGACTCGGG
TCAAGTTTCAAAAAGGCGAAGAACGTGGTAGCCAGACGATCTTTAACAGA
TATTCCAGAGCTCAGCACCACAGATATGATTATTCCAGGAACAATTGACG
AAGCTGTGTGCAGGATTTGTTTCGTATGCCGGAAAAAGTTGGGGTGCAGA
GTGTTTGTGAAGAACACTGGTAAGAAGATTAAGGTGGAAGCAGAGGATCG
ACAAAGAGGTTACTATCTCAGAGCATCTTTATTCGTGAGTTTGTTGGGAG
GCGAAGAACCTGCGTGTGCTCTAAACATTCGGCAGAGTAGAGCAGATGGG
ATGAAGACGAGCTTTGCAACATTATGGGATTTCTATCAACGACTCGAGAA
AGGCTTGCAAGAATTAGAAGCAGGGCACAACCGGTAG back to topCoding sequence (CDS) from alignment at tig00000125_pilon:279014..280900+ >Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1887bp|location=Sequence derived from alignment at tig00000125_pilon:279014..280900+ (Gracilaria gracilis GNS1m male)
ATGTCAGCAAGCAATGAAAATGAATCCAAGTCTTTCAACTCTCGAAAGTT
AGCCAGAAACACAGCAAGTGATGCGAGCGAAAATGAAGCGCTTGATTCCA
TTGACGCGAAACAACAACGTGAAGCCCTCGTTGAGCATTCGACCAAGCCG
CAGCCGAGCAGTAGGATAACTCTGAGCAACACAAGTCCAAAGCCGTGGCC
AATGCCTGCCCAGAACGAGAAGGACGCGTCACCAACTTTTCGGTCGTTGA
AAGAGCGAAGCGCGCAAGACTCGGAGAGCGACTTCAAGACCCCGCAAACA
AAGTTTTTCGCCTCGCAGAACGCCCAGAAGTCTTCAATGTCTTCTCTACC
CAAGTCCCCTCCGCTTGAGGTTTCGCCTGTGCAGGAAGTTTTTCTGGATG
ACGTCGATCTGCCCTCGTCCAGGAACATATTCTCCGATAGTGGGAATAGC
AAAGGCAGTAAGGAATCTATTGCGGTTCTGTTCAAGAGAAAGAATGCTAC
GAGGCATAGAGAACCTGAAGCTGACGTTTCCGCTGCATTTGTAGACAGGT
ACTGCTCAAGTCCAGAGGAAGAAGTGGTGTCAATCTCTGAACAAGAGAGT
GGCACATTTCGCTTTCTAAAGGATGATGAAGTAAGTCCAAGCAGCGAGAA
AAGCTTCAAGTTTCCTTCCGGTTTGAGGAACCTGTTTGGAGACGACGGAA
GAAACTCATCGGGACGAAGGTCTTCCAGGAGCCGAACGCCCCGCAGTTTT
GGACTTGATAGTGAGTTATTCTCTCCACTCAAGTCCACCGATGGGCTGGG
TGAACCTGAAGGCAGGAGTGGTGGAAGTCGACAAGGGCTATCCGAGCCAA
AAGCATTGAAAGCTTCATCCAATTCGTCATCAAAAGCTGCTTTGCGGAGA
CCGTTGGGAAGTCGAAGGAAGACTTTCATTGACCTTTCGAAACCACCGCT
ACCTGAAGCAGTTTCTCCACGATTGGCGGACCGATCCATAGAAGAACCAA
GTATCACCGAGGTAGAGGAAGTGAACAAGCCAAGAACCAGTCCAAGCAGT
AGCAAGTCAACTGAAACATCAGAGGAACAAATCAAAGTCGTGTCTCCGTT
GATGACCAAGGGTGTGATAATGCGAGCTCAAACTCACAAGACCAATGTAA
ATGGAATTCGGAAAGCGGAGACCGGCAAGATTATGAGCCGGGAAGAGTTG
CTTGGAGACCGCAAGGTAGTATTTCTTCGAGAAAGCCCAGTACCAAAGTC
GCTCAATCCCGCTGCGTTCAGCGAGGATGATGATGTTATGACAAGGAGAC
CATCTACACTCTTCCAGTATTCTAGCTCGGAAAGTGAGGGAGGGTTACCG
AACGTCAGTGCTCACAAGTTGGAAGCTGATGATGGGACGTTTTTGGGAGA
CAAGGCATCGCTGGGCTACATCTATCAAGAAGTGCAGAGCAGTAGTAGTT
CGAAGTTCTCCGAGAATGGCAGCTCTTCTGGTCTGGTGAATCGACTCGGG
TCAAGTTTCAAAAAGGCGAAGAACGTGGTAGCCAGACGATCTTTAACAGA
TATTCCAGAGCTCAGCACCACAGATATGATTATTCCAGGAACAATTGACG
AAGCTGTGTGCAGGATTTGTTTCGTATGCCGGAAAAAGTTGGGGTGCAGA
GTGTTTGTGAAGAACACTGGTAAGAAGATTAAGGTGGAAGCAGAGGATCG
ACAAAGAGGTTACTATCTCAGAGCATCTTTATTCGTGAGTTTGTTGGGAG
GCGAAGAACCTGCGTGTGCTCTAAACATTCGGCAGAGTAGAGCAGATGGG
ATGAAGACGAGCTTTGCAACATTATGGGATTTCTATCAACGACTCGAGAA
AGGCTTGCAAGAATTAGAAGCAGGGCACAACCGGTAG back to top
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