Ggra10878.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10878.t1
Unique Name	Ggra10878.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	629

Homology

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BLAST of Ggra10878.t1 vs. uniprot
Match: A0A2V3IYI0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI0_9FLOR)

HSP 1 Score: 409 bits (1052), Expect = 5.930e-132
Identity = 282/609 (46.31%), Postives = 364/609 (59.77%), Query Frame = 0

Query:   90 DSESDFKTPQTKFFASQNAQKSSMSSLPKSPPLEVSPVQEVFLDDVDLPSSRNIFSDSGNSKGSK--ESIAVLFKRKNATRHREPEADVSAAFVDRYCSSPEEEVVSISEQESGTFRFLKDDEVSPSSEKSFKFPSGLRNLFGDDGRNSSGRRSSR-SRTPRSFGLDSELFSPLKSTDGLGEPEGRSGGSRQGLS---EPKALKASSNSSSKAA----------------------------------------------------------LRRPLGSRRKTFIDLSKPPLPEAVSPRLADRSIEEPSITE-----VEEVNKPRTSPSSSKSTETSEEQIKVVSPLMTKGVIMRAQTHKTNVNGIRKAETGKIMSREELLGDRKVVFLRESPVPKSLNPAAFSEDDDVMTRRPSTLFQYSSSESEGGLPNVSAHKL--EADDGTFLG----DKASLGYIYQEVQSSSSSKFSENGSSSGLVNRLGSSFKKAKNVVARRSLTDIPELSTTDMIIPGTIDEAVCRICFVCRKKLGCRVFVKNTGKKIKVEA-EDRQRGYYLRASLFVSLLGGEEPACALNIRQSRADGMKTSFATLWDFYQRLEKGLQEL 622
            +S+ D+KTP T  F  Q  +  S S   +S PLE+SPVQ++  DD+D+PS+  I S    SKG K  +   V+++R+     R  +   S +  +     P EE  ++        +F +DDE S    KS +   GL+ LF          R+SR SRTP++   + E+FSP  S D L   E  S G    L    EPKA K +  +++  +                                                          +RRPLGSRRKT IDLS   + E+V   + D + +E   +      V+E      SP S +S+ T E  IKVVSP   KGVIMRA THKTNVNGIRKAETGKIMSR+ELL ++K + L+E+P+PKSLNPAAFSE+DDVM+RRPSTLF +SSSES+G + +    KL  + DDG+FL     DKAS  Y Y EV S SSSKFSENGSSSG+VNRLGSSFKKAKN VAR+S+T++P++  TD+++ GT+DEAV RIC+VCRKKL C+VFVKNTG+KIKVE  EDR+ G YLRA+L +  +GG+  ACA+NIRQSR DGMKT+FA LW+FYQ LEKGLQEL
Sbjct:   23 ESDGDYKTPSTSLFGGQG-EDGSDSEGRESGPLEISPVQQLLFDDIDIPSA--IDSLKKRSKGEKVEKDAEVVYEREKRRPRRTNDRFESDSISNALGIIPIEEETAVEPHSEDFVQFSEDDE-SEEEAKSVRVIPGLQGLFXXXXXXXXXXRTSRKSRTPKAPDSELEMFSPRLSNDELDRHERTSRGPLPRLPLIYEPKAKKTAKRTTTDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLIRRPLGSRRKTLIDLS---VKESV---IEDSNGDEEKKSRHRAPRVQEEKVSEKSPES-RSSATIESDIKVVSPPR-KGVIMRANTHKTNVNGIRKAETGKIMSRDELLTEQKSMLLKENPIPKSLNPAAFSEEDDVMSRRPSTLFNFSSSESDG-VTSGQRGKLGSQTDDGSFLEGGLLDKASASYTYHEVHSGSSSKFSENGSSSGIVNRLGSSFKKAKNAVARKSVTELPDVGGTDLLLAGTVDEAVLRICYVCRKKLKCKVFVKNTGRKIKVECDEDRKAGRYLRATLVLKAVGGDNSACAVNIRQSRHDGMKTTFARLWEFYQELEKGLQEL 618

The following BLAST results are available for this feature:

BLAST of Ggra10878.t1 vs. uniprot

BLAST of Ggra10878.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYI0	5.930e-132	46.31	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000125_pilon	contig	tig00000125_pilon:279014..280900 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10878.t1	Ggra10878.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000125_pilon 279014..280900 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10878.t1 ID=Ggra10878.t1|Name=Ggra10878.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=629bp
MSASNENESKSFNSRKLARNTASDASENEALDSIDAKQQREALVEHSTKP
QPSSRITLSNTSPKPWPMPAQNEKDASPTFRSLKERSAQDSESDFKTPQT
KFFASQNAQKSSMSSLPKSPPLEVSPVQEVFLDDVDLPSSRNIFSDSGNS
KGSKESIAVLFKRKNATRHREPEADVSAAFVDRYCSSPEEEVVSISEQES
GTFRFLKDDEVSPSSEKSFKFPSGLRNLFGDDGRNSSGRRSSRSRTPRSF
GLDSELFSPLKSTDGLGEPEGRSGGSRQGLSEPKALKASSNSSSKAALRR
PLGSRRKTFIDLSKPPLPEAVSPRLADRSIEEPSITEVEEVNKPRTSPSS
SKSTETSEEQIKVVSPLMTKGVIMRAQTHKTNVNGIRKAETGKIMSREEL
LGDRKVVFLRESPVPKSLNPAAFSEDDDVMTRRPSTLFQYSSSESEGGLP
NVSAHKLEADDGTFLGDKASLGYIYQEVQSSSSSKFSENGSSSGLVNRLG
SSFKKAKNVVARRSLTDIPELSTTDMIIPGTIDEAVCRICFVCRKKLGCR
VFVKNTGKKIKVEAEDRQRGYYLRASLFVSLLGGEEPACALNIRQSRADG
MKTSFATLWDFYQRLEKGLQELEAGHNR*