Ggra6945.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6945.t1
Unique NameGgra6945.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length325
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:190982..191956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6945Ggra6945Gracilaria gracilis GNS1m malegenetig00000115_pilon 190982..191956 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6945.t1.stop1Ggra6945.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000115_pilon 190982..190984 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6945.t1.CDS1Ggra6945.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000115_pilon 190982..191956 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6945.t1.exon1Ggra6945.t1.exon1Gracilaria gracilis GNS1m maleexontig00000115_pilon 190982..191956 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6945.t1.start1Ggra6945.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000115_pilon 191954..191956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6945.t1Ggra6945.t1Gracilaria gracilis GNS1m malepolypeptidetig00000115_pilon 190982..191956 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=325bp
MGRDSAAAAPPPPTPPPTPPPTLADGTHPLEQSATQPVKLLTDLQRVQRK
WQMASVNHFLDAFSAYLPLSQLSSDAAEELTPHALERAVAQPERDGQSCE
LLRDVVMALLVALDAVSFKGARTAWFHALRVLVDGERECFADCFQAGRNV
LEAFDDGMDFLTQCGWHVRLGVLLSLCDVAAERAKSVRDAIRDAEHASTL
SRCELDAAGFRLQPLGRCSQRRFHYKVGRTRIYSGYKRRGNGALLVECSD
SKSMALLADALRASAVVRDVQLGDHIRANLLAPLQELEQRAARRAERKRL
EQRLRLESRRRNSARPRRTNAAYL*
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spliced messenger RNA

>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=975bp|location=Sequence derived from alignment at tig00000115_pilon:190982..191956- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGACGAGACTCGGCGGCCGCCGCACCGCCGCCGCCGACGCCGCCGCC
GACGCCGCCGCCGACGCTGGCAGACGGCACACACCCGCTGGAGCAGAGCG
CAACGCAGCCCGTCAAGCTGCTCACCGATCTGCAGCGCGTGCAGCGCAAG
TGGCAGATGGCGTCGGTGAACCATTTTCTGGACGCGTTCAGCGCCTATCT
GCCGCTGTCGCAGCTGTCGAGCGACGCGGCGGAGGAGCTGACGCCGCACG
CGCTGGAGCGCGCGGTGGCGCAGCCCGAGCGCGACGGCCAGTCGTGCGAG
CTGCTGCGCGACGTGGTGATGGCGCTGCTTGTGGCGCTGGACGCGGTGTC
GTTCAAGGGCGCGCGCACGGCGTGGTTCCACGCGCTGCGCGTGCTGGTGG
ACGGCGAGCGCGAGTGCTTCGCGGACTGCTTCCAGGCGGGGCGCAACGTG
CTGGAGGCGTTCGACGACGGCATGGACTTTCTCACGCAGTGTGGCTGGCA
CGTGCGTCTCGGCGTGCTGCTGTCGCTGTGCGACGTCGCGGCTGAACGCG
CCAAGAGCGTGCGCGACGCCATCCGCGACGCCGAGCACGCCAGCACGCTG
AGCCGCTGCGAGCTGGACGCGGCTGGCTTCCGGCTGCAGCCGCTGGGCAG
ATGCAGCCAGCGGCGCTTCCACTACAAGGTCGGGCGCACGCGCATCTACT
CGGGCTACAAGCGGCGCGGCAACGGCGCGCTGCTGGTGGAGTGCTCCGAC
TCCAAGTCCATGGCGCTGCTGGCCGACGCGCTGCGCGCGTCGGCCGTGGT
GCGCGACGTGCAGCTTGGCGACCACATCCGCGCCAACTTGCTCGCGCCGC
TGCAGGAGCTGGAGCAGCGCGCCGCGCGCCGCGCCGAGCGCAAGCGCCTC
GAGCAGCGCCTTCGCCTCGAGTCTCGCCGCCGCAACTCGGCGCGCCCGAG
GAGGACCAACGCCGCGTACTTGTGA
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protein sequence of Ggra6945.t1

>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=325bp
MGRDSAAAAPPPPTPPPTPPPTLADGTHPLEQSATQPVKLLTDLQRVQRK
WQMASVNHFLDAFSAYLPLSQLSSDAAEELTPHALERAVAQPERDGQSCE
LLRDVVMALLVALDAVSFKGARTAWFHALRVLVDGERECFADCFQAGRNV
LEAFDDGMDFLTQCGWHVRLGVLLSLCDVAAERAKSVRDAIRDAEHASTL
SRCELDAAGFRLQPLGRCSQRRFHYKVGRTRIYSGYKRRGNGALLVECSD
SKSMALLADALRASAVVRDVQLGDHIRANLLAPLQELEQRAARRAERKRL
EQRLRLESRRRNSARPRRTNAAYL*
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mRNA from alignment at tig00000115_pilon:190982..191956-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=975bp|location=Sequence derived from alignment at tig00000115_pilon:190982..191956- (Gracilaria gracilis GNS1m male)
ATGGGACGAGACTCGGCGGCCGCCGCACCGCCGCCGCCGACGCCGCCGCC
GACGCCGCCGCCGACGCTGGCAGACGGCACACACCCGCTGGAGCAGAGCG
CAACGCAGCCCGTCAAGCTGCTCACCGATCTGCAGCGCGTGCAGCGCAAG
TGGCAGATGGCGTCGGTGAACCATTTTCTGGACGCGTTCAGCGCCTATCT
GCCGCTGTCGCAGCTGTCGAGCGACGCGGCGGAGGAGCTGACGCCGCACG
CGCTGGAGCGCGCGGTGGCGCAGCCCGAGCGCGACGGCCAGTCGTGCGAG
CTGCTGCGCGACGTGGTGATGGCGCTGCTTGTGGCGCTGGACGCGGTGTC
GTTCAAGGGCGCGCGCACGGCGTGGTTCCACGCGCTGCGCGTGCTGGTGG
ACGGCGAGCGCGAGTGCTTCGCGGACTGCTTCCAGGCGGGGCGCAACGTG
CTGGAGGCGTTCGACGACGGCATGGACTTTCTCACGCAGTGTGGCTGGCA
CGTGCGTCTCGGCGTGCTGCTGTCGCTGTGCGACGTCGCGGCTGAACGCG
CCAAGAGCGTGCGCGACGCCATCCGCGACGCCGAGCACGCCAGCACGCTG
AGCCGCTGCGAGCTGGACGCGGCTGGCTTCCGGCTGCAGCCGCTGGGCAG
ATGCAGCCAGCGGCGCTTCCACTACAAGGTCGGGCGCACGCGCATCTACT
CGGGCTACAAGCGGCGCGGCAACGGCGCGCTGCTGGTGGAGTGCTCCGAC
TCCAAGTCCATGGCGCTGCTGGCCGACGCGCTGCGCGCGTCGGCCGTGGT
GCGCGACGTGCAGCTTGGCGACCACATCCGCGCCAACTTGCTCGCGCCGC
TGCAGGAGCTGGAGCAGCGCGCCGCGCGCCGCGCCGAGCGCAAGCGCCTC
GAGCAGCGCCTTCGCCTCGAGTCTCGCCGCCGCAACTCGGCGCGCCCGAG
GAGGACCAACGCCGCGTACTTGTGA
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Coding sequence (CDS) from alignment at tig00000115_pilon:190982..191956-

>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=975bp|location=Sequence derived from alignment at tig00000115_pilon:190982..191956- (Gracilaria gracilis GNS1m male)
ATGGGACGAGACTCGGCGGCCGCCGCACCGCCGCCGCCGACGCCGCCGCC
GACGCCGCCGCCGACGCTGGCAGACGGCACACACCCGCTGGAGCAGAGCG
CAACGCAGCCCGTCAAGCTGCTCACCGATCTGCAGCGCGTGCAGCGCAAG
TGGCAGATGGCGTCGGTGAACCATTTTCTGGACGCGTTCAGCGCCTATCT
GCCGCTGTCGCAGCTGTCGAGCGACGCGGCGGAGGAGCTGACGCCGCACG
CGCTGGAGCGCGCGGTGGCGCAGCCCGAGCGCGACGGCCAGTCGTGCGAG
CTGCTGCGCGACGTGGTGATGGCGCTGCTTGTGGCGCTGGACGCGGTGTC
GTTCAAGGGCGCGCGCACGGCGTGGTTCCACGCGCTGCGCGTGCTGGTGG
ACGGCGAGCGCGAGTGCTTCGCGGACTGCTTCCAGGCGGGGCGCAACGTG
CTGGAGGCGTTCGACGACGGCATGGACTTTCTCACGCAGTGTGGCTGGCA
CGTGCGTCTCGGCGTGCTGCTGTCGCTGTGCGACGTCGCGGCTGAACGCG
CCAAGAGCGTGCGCGACGCCATCCGCGACGCCGAGCACGCCAGCACGCTG
AGCCGCTGCGAGCTGGACGCGGCTGGCTTCCGGCTGCAGCCGCTGGGCAG
ATGCAGCCAGCGGCGCTTCCACTACAAGGTCGGGCGCACGCGCATCTACT
CGGGCTACAAGCGGCGCGGCAACGGCGCGCTGCTGGTGGAGTGCTCCGAC
TCCAAGTCCATGGCGCTGCTGGCCGACGCGCTGCGCGCGTCGGCCGTGGT
GCGCGACGTGCAGCTTGGCGACCACATCCGCGCCAACTTGCTCGCGCCGC
TGCAGGAGCTGGAGCAGCGCGCCGCGCGCCGCGCCGAGCGCAAGCGCCTC
GAGCAGCGCCTTCGCCTCGAGTCTCGCCGCCGCAACTCGGCGCGCCCGAG
GAGGACCAACGCCGCGTACTTGTGA
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