Ggra6945.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6945.t1
Unique Name	Ggra6945.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	325

Homology

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BLAST of Ggra6945.t1 vs. uniprot
Match: A0A2V3IG22 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG22_9FLOR)

HSP 1 Score: 365 bits (937), Expect = 2.260e-123
Identity = 184/300 (61.33%), Postives = 231/300 (77.00%), Query Frame = 0

Query:   25 DGTHPLEQSATQPVKLLTDLQRVQRKWQMASVNHFLDAFSAYLPLSQLSSDAAEELTPHALERAVAQPERDGQSCELLRDVVMALLVALDAVSFKGARTAWFHALRVLVDGERECFADCFQAGRNVLEAFDDGMDFLTQCGWHVRLGVLLSLCDVAAERAKSVRDAIRDAEHASTLSRCELDAAGFRLQPLGRCSQRRFHYKVGRTRIYSGYKRRGNGALLVECSDSKSMALLADALRASAVVRDVQLGDHIRANLLAPLQELEQRAARRAERKRLEQRLXXXXXRRNSARPRRTNAAYL 324
            D  HPLE   T  VK++ D++RVQRKWQMAS NHFL  F+  LPL ++S D AE+LTP  LERA+A+PER  +SC +LRDV+ ALLV+L+AVS K ++T+WF ALRV V+   E F DCFQ G NVLE +++GMDFL + GWHVRLG+LL+LCD+ AERAK++RDAIR++E ASTL++ ++D  G+RLQPLGRCSQRRFHYK+G+TRIYSGYKR+GNGALLVECSDS +M+ LA++L  S   RD +L   IR   LAPLQE E+R  R+ ERKRL +       RRNS RPRR+ AAYL
Sbjct:   17 DEPHPLEVCKTNEVKIIPDMERVQRKWQMASCNHFLHVFADKLPLREISVDTAEDLTPETLERAIAEPERSMESCIILRDVLTALLVSLEAVSLKNSQTSWFQALRVHVNRHPEEFGDCFQYGTNVLERYENGMDFLVESGWHVRLGLLLALCDITAERAKAIRDAIRESEVASTLTKSDIDQKGYRLQPLGRCSQRRFHYKIGKTRIYSGYKRKGNGALLVECSDSSTMSKLAESLGCSPHSRDTKLSTDIRTKFLAPLQEHEERVRRKMERKRLAEIQREESRRRNSVRPRRSRAAYL 316

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BLAST of Ggra6945.t1 vs. uniprot
Match: R7QIC6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIC6_CHOCR)

HSP 1 Score: 273 bits (699), Expect = 6.130e-88
Identity = 141/271 (52.03%), Postives = 188/271 (69.37%), Query Frame = 0

Query:   53 MASVNHFLDAFSAYLPLSQLSSDAAEELTPHALERAVAQPERDGQSCELLRDVVMALLVALDAVSFKGARTAWFHALRVLVDGERECFADCFQAGRNVLEAFDDGMDFLTQCGWHVRLGVLLSLCDVAAERAKSVRDAIRDAEHASTLSRCELDAAGFRLQPLGRCSQRRFHYKVGRTRIYSGYKRRGNGALLVECSDSKSMALLADALRASAVVRDVQLGDHIRANLLAPLQELEQRAARRAERKRLEQRLXXXXXRRNSARPRRTNAAY 323
            MASV HF +AF   +PL ++S D  E+LTP  LE AV +PE D ++C  LRD++M LL+ + A + K   T WF +LR+LV   R  F DC+    NVL  F++G+DF+T   W+VRLG++LSLCDVAAE ++S+RDAIR+AE   T  +  ++A G+RL P+GRCS+RR HYKVG+TRIYSGYKR+G GALL ECSDS+SM  LA AL ++  +RD  L   IR   LAPL ELE++  ++ E+ RL +       RRNSARPRR+ A+Y
Sbjct:    1 MASVAHFFEAFKDVIPLKEISEDTYEDLTPSLLEGAVVEPEVDARACLALRDLIMTLLLTIGAATKKSLATTWFQSLRILVGSNRAAFLDCYDHHENVLGRFENGLDFVTNVDWNVRLGIMLSLCDVAAETSQSIRDAIREAELECTHQKNAIEAKGYRLLPMGRCSKRRVHYKVGKTRIYSGYKRKGTGALLPECSDSESMKQLAAALESTQTIRDQTLASRIRDIHLAPLIELEEKNKKKLEKTRLAEIRKEESRRRNSARPRRSKASY 271

The following BLAST results are available for this feature:

BLAST of Ggra6945.t1 vs. uniprot

BLAST of Ggra6945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IG22	2.260e-123	61.33	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QIC6	6.130e-88	52.03	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000115_pilon	contig	tig00000115_pilon:190982..191956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6945.t1	Ggra6945.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000115_pilon 190982..191956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6945.t1 ID=Ggra6945.t1|Name=Ggra6945.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=325bp
MGRDSAAAAPPPPTPPPTPPPTLADGTHPLEQSATQPVKLLTDLQRVQRK
WQMASVNHFLDAFSAYLPLSQLSSDAAEELTPHALERAVAQPERDGQSCE
LLRDVVMALLVALDAVSFKGARTAWFHALRVLVDGERECFADCFQAGRNV
LEAFDDGMDFLTQCGWHVRLGVLLSLCDVAAERAKSVRDAIRDAEHASTL
SRCELDAAGFRLQPLGRCSQRRFHYKVGRTRIYSGYKRRGNGALLVECSD
SKSMALLADALRASAVVRDVQLGDHIRANLLAPLQELEQRAARRAERKRL
EQRLRLESRRRNSARPRRTNAAYL*